Rifqi Hafizuddin commited on
Commit Β·
ac6b78d
1
Parent(s): e9f2a26
[KM-507] add multiple retrieval method to compare (dense, mmr, bm25, hybrid)
Browse files- src/db/postgres/init_db.py +15 -0
- src/rag/retrievers/schema.py +274 -43
src/db/postgres/init_db.py
CHANGED
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@@ -28,3 +28,18 @@ async def init_db():
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await conn.execute(text(
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"ALTER TABLE rooms ADD COLUMN IF NOT EXISTS status VARCHAR NOT NULL DEFAULT 'active'"
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))
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await conn.execute(text(
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"ALTER TABLE rooms ADD COLUMN IF NOT EXISTS status VARCHAR NOT NULL DEFAULT 'active'"
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))
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+
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# GIN index for FTS on schema chunks β only created if table exists
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# (langchain_pg_embedding is created by PGVector on first use, not by create_all)
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await conn.execute(text("""
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DO $$
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BEGIN
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IF EXISTS (
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SELECT FROM information_schema.tables
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WHERE table_name = 'langchain_pg_embedding'
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) THEN
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CREATE INDEX IF NOT EXISTS idx_langchain_pg_embedding_fts
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ON langchain_pg_embedding USING GIN (to_tsvector('english', document));
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END IF;
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END $$
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"""))
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src/rag/retrievers/schema.py
CHANGED
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@@ -1,86 +1,317 @@
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"""Schema retriever β handles DB schemas (source_type="database") and tabular file
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columns stored as source_type="document" with file_type in ("csv","xlsx").
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-
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"""
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import asyncio
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from src.db.postgres.vector_store import get_vector_store
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from src.middlewares.logging import get_logger
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from src.rag.base import BaseRetriever, RetrievalResult
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logger = get_logger("schema_retriever")
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-
_SCORE_THRESHOLD = 0.
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_TABULAR_FILE_TYPES = ("csv", "xlsx")
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class SchemaRetriever(BaseRetriever):
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def __init__(self):
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self.vector_store = get_vector_store()
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-
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-
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docs_with_scores = await self.vector_store.asimilarity_search_with_score(
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query=query,
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-
k=k,
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filter={"user_id": user_id, "source_type": "database"},
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)
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results = []
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for doc, distance in docs_with_scores:
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-
if
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-
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)
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return results
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-
async def
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-
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results = []
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-
for
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-
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-
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)
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results.append(
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RetrievalResult(
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content=doc.page_content,
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metadata=doc.metadata,
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score=1.0 - distance,
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source_type="document",
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)
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)
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return results
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async def
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-
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) -> list[RetrievalResult]:
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db_results, tabular_results = await asyncio.gather(
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self._search_db(query, user_id, k),
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self._search_tabular(query, user_id, k),
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)
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combined = db_results + tabular_results
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)
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return combined[:k]
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schema_retriever = SchemaRetriever()
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"""Schema retriever β handles DB schemas (source_type="database") and tabular file
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columns stored as source_type="document" with file_type in ("csv","xlsx").
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+
Multiple retrieval strategies are exposed for benchmarking. The active strategy
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used by the router is `retrieve()`, which dispatches to ACTIVE_STRATEGY.
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Change ACTIVE_STRATEGY at module level to switch without touching the router.
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"""
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import asyncio
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import time
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from typing import Literal
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from sqlalchemy import text
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from src.db.postgres.connection import _pgvector_engine
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from src.db.postgres.vector_store import get_vector_store
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from src.middlewares.logging import get_logger
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from src.rag.base import BaseRetriever, RetrievalResult
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logger = get_logger("schema_retriever")
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_SCORE_THRESHOLD = 0.60 # cosine distance β discard above this value (score < 0.40)
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_TABULAR_FILE_TYPES = ("csv", "xlsx")
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Strategy = Literal["dense", "dense_no_threshold", "mmr", "hybrid", "hybrid_bm25"]
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ACTIVE_STRATEGY: Strategy = "hybrid_bm25"
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class SchemaRetriever(BaseRetriever):
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def __init__(self):
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self.vector_store = get_vector_store()
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# ------------------------------------------------------------------
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# Internal search helpers
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# ------------------------------------------------------------------
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async def _search_db(
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self, query: str, user_id: str, k: int, threshold: float | None = _SCORE_THRESHOLD
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) -> list[RetrievalResult]:
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docs_with_scores = await self.vector_store.asimilarity_search_with_score(
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query=query,
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+
k=k * 4, # fetch extra to survive dedup attrition from multiple ingestion runs
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filter={"user_id": user_id, "source_type": "database"},
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)
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+
return [
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+
RetrievalResult(
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content=doc.page_content,
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metadata=doc.metadata,
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+
score=1.0 - distance,
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+
source_type="database",
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+
)
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+
for doc, distance in docs_with_scores
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if threshold is None or distance <= threshold
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]
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+
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async def _search_tabular(
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self, query: str, user_id: str, k: int, threshold: float | None = _SCORE_THRESHOLD
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) -> list[RetrievalResult]:
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# Fetch extra to account for post-filter attrition (non-tabular docs filtered out)
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docs_with_scores = await self.vector_store.asimilarity_search_with_score(
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query=query,
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k=k * 4,
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filter={"user_id": user_id, "source_type": "document"},
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)
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results = []
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for doc, distance in docs_with_scores:
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if doc.metadata.get("data", {}).get("file_type") not in _TABULAR_FILE_TYPES:
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continue
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if threshold is not None and distance > threshold:
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continue
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+
results.append(
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+
RetrievalResult(
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content=doc.page_content,
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+
metadata=doc.metadata,
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+
score=1.0 - distance,
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+
source_type="document",
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)
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)
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if len(results) >= k:
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break
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return results
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+
async def _search_db_mmr(self, query: str, user_id: str, k: int) -> list[RetrievalResult]:
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docs = await self.vector_store.amax_marginal_relevance_search(
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query=query,
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k=k * 4, # fetch extra to survive dedup attrition
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fetch_k=k * 12,
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filter={"user_id": user_id, "source_type": "database"},
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)
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return [
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+
RetrievalResult(
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content=doc.page_content,
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metadata=doc.metadata,
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score=0.0, # MMR does not return scores
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+
source_type="database",
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)
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for doc in docs
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]
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+
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async def _search_tabular_mmr(self, query: str, user_id: str, k: int) -> list[RetrievalResult]:
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docs = await self.vector_store.amax_marginal_relevance_search(
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query=query,
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k=k * 4,
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fetch_k=k * 12,
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filter={"user_id": user_id, "source_type": "document"},
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)
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results = []
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+
for doc in docs:
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+
if doc.metadata.get("data", {}).get("file_type") not in _TABULAR_FILE_TYPES:
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+
continue
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+
results.append(
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+
RetrievalResult(
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+
content=doc.page_content,
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+
metadata=doc.metadata,
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+
score=0.0,
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+
source_type="document",
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+
)
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)
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if len(results) >= k:
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break
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return results
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+
async def _search_fts_db(self, query: str, user_id: str, k: int) -> list[RetrievalResult]:
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+
"""Full-text search over DB schema chunks using PostgreSQL tsvector.
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+
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Uses plainto_tsquery (natural language, no operator syntax required).
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Requires the GIN index created by init_db.py on first startup after table exists.
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ts_rank score is only used for ordering here; RRF ignores it.
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"""
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sql = text("""
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+
SELECT lpe.document, lpe.cmetadata,
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+
ts_rank(to_tsvector('english', lpe.document),
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plainto_tsquery('english', :query)) AS rank
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+
FROM langchain_pg_embedding lpe
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+
JOIN langchain_pg_collection lpc ON lpe.collection_id = lpc.uuid
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WHERE lpc.name = 'document_embeddings'
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+
AND lpe.cmetadata->>'user_id' = :user_id
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AND lpe.cmetadata->>'source_type' = 'database'
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AND to_tsvector('english', lpe.document) @@ plainto_tsquery('english', :query)
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+
ORDER BY rank DESC
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+
LIMIT :k
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""")
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+
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+
async with _pgvector_engine.connect() as conn:
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+
result = await conn.execute(sql, {"query": query, "user_id": user_id, "k": k})
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+
rows = result.fetchall()
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+
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+
return [
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+
RetrievalResult(
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+
content=row.document,
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+
metadata=row.cmetadata,
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| 152 |
+
score=float(row.rank),
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+
source_type="database",
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+
)
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+
for row in rows
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+
]
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| 157 |
+
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| 158 |
+
def _rrf_merge(
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| 159 |
+
self,
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| 160 |
+
*ranked_lists: list[RetrievalResult],
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+
k_rrf: int = 60,
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| 162 |
+
top_k: int = 5,
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| 163 |
) -> list[RetrievalResult]:
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| 164 |
+
"""Reciprocal Rank Fusion β combines ranked lists using rank positions only.
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| 165 |
+
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+
Uses content prefix as dedup key so the same column appearing in multiple
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| 167 |
+
lists is counted once with accumulated RRF score.
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| 168 |
+
"""
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| 169 |
+
scores: dict[str, float] = {}
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| 170 |
+
index: dict[str, RetrievalResult] = {}
|
| 171 |
+
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+
for ranked in ranked_lists:
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+
for rank, result in enumerate(ranked):
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+
key = result.content[:120]
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+
scores[key] = scores.get(key, 0.0) + 1.0 / (k_rrf + rank + 1)
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| 176 |
+
index[key] = result
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| 177 |
+
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+
merged = sorted(index.values(), key=lambda r: scores[r.content[:120]], reverse=True)
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+
return merged[:top_k]
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| 180 |
+
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+
def _dedup(self, results: list[RetrievalResult]) -> list[RetrievalResult]:
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| 182 |
+
"""Deduplicate by (table_name, column_name), keeping highest score per unique column.
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| 183 |
+
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+
Multiple ingestion runs of the same DB produce identical chunks β this collapses
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| 185 |
+
them so the LLM context only sees one chunk per column.
|
| 186 |
+
"""
|
| 187 |
+
seen: dict[tuple, RetrievalResult] = {}
|
| 188 |
+
for r in results:
|
| 189 |
+
data = r.metadata.get("data", {})
|
| 190 |
+
key = (data.get("table_name"), data.get("column_name") or data.get("filename"))
|
| 191 |
+
if key not in seen or r.score > seen[key].score:
|
| 192 |
+
seen[key] = r
|
| 193 |
+
return sorted(seen.values(), key=lambda r: r.score, reverse=True)
|
| 194 |
+
|
| 195 |
+
# ------------------------------------------------------------------
|
| 196 |
+
# Named strategies β call directly from benchmark / test scripts
|
| 197 |
+
# ------------------------------------------------------------------
|
| 198 |
+
|
| 199 |
+
async def dense(self, query: str, user_id: str, k: int = 5) -> list[RetrievalResult]:
|
| 200 |
+
"""Dense similarity with score threshold. Current production default."""
|
| 201 |
db_results, tabular_results = await asyncio.gather(
|
| 202 |
self._search_db(query, user_id, k),
|
| 203 |
self._search_tabular(query, user_id, k),
|
| 204 |
)
|
| 205 |
+
combined = self._dedup(db_results + tabular_results)
|
| 206 |
+
return combined[:k]
|
| 207 |
+
|
| 208 |
+
async def dense_no_threshold(self, query: str, user_id: str, k: int = 5) -> list[RetrievalResult]:
|
| 209 |
+
"""Dense similarity without score cutoff.
|
| 210 |
+
|
| 211 |
+
Use to calibrate whether the threshold is too strict/loose β
|
| 212 |
+
compare returned chunks against `dense` to see what gets filtered out.
|
| 213 |
+
"""
|
| 214 |
+
db_results, tabular_results = await asyncio.gather(
|
| 215 |
+
self._search_db(query, user_id, k, threshold=None),
|
| 216 |
+
self._search_tabular(query, user_id, k, threshold=None),
|
| 217 |
)
|
| 218 |
+
combined = self._dedup(db_results + tabular_results)
|
| 219 |
return combined[:k]
|
| 220 |
|
| 221 |
+
async def mmr(self, query: str, user_id: str, k: int = 5) -> list[RetrievalResult]:
|
| 222 |
+
"""MMR (Maximal Marginal Relevance) for diversity.
|
| 223 |
+
|
| 224 |
+
Note: scores are 0.0 β MMR does not expose similarity scores.
|
| 225 |
+
Dedup still applied since multiple ingestion runs produce duplicate chunks.
|
| 226 |
+
"""
|
| 227 |
+
db_results, tabular_results = await asyncio.gather(
|
| 228 |
+
self._search_db_mmr(query, user_id, k),
|
| 229 |
+
self._search_tabular_mmr(query, user_id, k),
|
| 230 |
+
)
|
| 231 |
+
return self._dedup(db_results + tabular_results)[:k]
|
| 232 |
+
|
| 233 |
+
async def hybrid(self, query: str, user_id: str, k: int = 5) -> list[RetrievalResult]:
|
| 234 |
+
"""RRF merge of dense + MMR results.
|
| 235 |
+
|
| 236 |
+
Acts as a proxy for a true dense+FTS hybrid until a PostgreSQL tsvector
|
| 237 |
+
GIN index is added. Dense covers semantic queries; the second ranking
|
| 238 |
+
signal from MMR helps surface exact-name matches that dense ranks lower.
|
| 239 |
+
|
| 240 |
+
To upgrade to true FTS hybrid: replace mmr() leg with _search_fts()
|
| 241 |
+
(raw SQL using to_tsquery) and add the GIN index in init_db.py.
|
| 242 |
+
"""
|
| 243 |
+
dense_results, mmr_results = await asyncio.gather(
|
| 244 |
+
self.dense(query, user_id, k),
|
| 245 |
+
self.mmr(query, user_id, k),
|
| 246 |
+
)
|
| 247 |
+
return self._rrf_merge(dense_results, mmr_results, top_k=k)
|
| 248 |
+
|
| 249 |
+
async def hybrid_bm25(self, query: str, user_id: str, k: int = 5) -> list[RetrievalResult]:
|
| 250 |
+
"""RRF merge of dense + PostgreSQL FTS (true hybrid).
|
| 251 |
+
|
| 252 |
+
Dense handles semantic queries ("customer information", "revenue columns").
|
| 253 |
+
FTS handles structural/exact terms that appear literally in chunks:
|
| 254 |
+
[PRIMARY KEY], [FK ->], column type strings, exact column/table names.
|
| 255 |
+
|
| 256 |
+
FTS results are deduped by (table_name, column_name) before merge to prevent
|
| 257 |
+
multiple ingestion runs from accumulating RRF score unfairly.
|
| 258 |
+
Requires GIN index on langchain_pg_embedding.document (created by init_db.py).
|
| 259 |
+
"""
|
| 260 |
+
dense_results, fts_results = await asyncio.gather(
|
| 261 |
+
self.dense(query, user_id, k),
|
| 262 |
+
self._search_fts_db(query, user_id, k * 4),
|
| 263 |
+
)
|
| 264 |
+
return self._rrf_merge(dense_results, self._dedup(fts_results), top_k=k)
|
| 265 |
+
|
| 266 |
+
# ------------------------------------------------------------------
|
| 267 |
+
# Public interface β called by the router
|
| 268 |
+
# ------------------------------------------------------------------
|
| 269 |
+
|
| 270 |
+
async def retrieve(self, query: str, user_id: str, k: int = 5) -> list[RetrievalResult]:
|
| 271 |
+
strategy_fn = getattr(self, ACTIVE_STRATEGY)
|
| 272 |
+
results = await strategy_fn(query, user_id, k)
|
| 273 |
+
logger.info("schema retrieval", strategy=ACTIVE_STRATEGY, count=len(results))
|
| 274 |
+
return results
|
| 275 |
+
|
| 276 |
+
|
| 277 |
+
# ------------------------------------------------------------------
|
| 278 |
+
# Benchmark helper β import in test scripts
|
| 279 |
+
# ------------------------------------------------------------------
|
| 280 |
+
|
| 281 |
+
async def benchmark(
|
| 282 |
+
query: str,
|
| 283 |
+
user_id: str,
|
| 284 |
+
k: int = 5,
|
| 285 |
+
strategies: list[Strategy] | None = None,
|
| 286 |
+
) -> dict[str, dict]:
|
| 287 |
+
"""Run multiple strategies against the same query and return timing + results.
|
| 288 |
+
|
| 289 |
+
Strategies run sequentially so timings are isolated (not competing for the
|
| 290 |
+
same DB connections). Scores and chunk content are included for manual review.
|
| 291 |
+
|
| 292 |
+
Usage:
|
| 293 |
+
from src.rag.retrievers.schema import benchmark
|
| 294 |
+
report = await benchmark("what is the primary key of orders?", user_id="xxx")
|
| 295 |
+
"""
|
| 296 |
+
retriever = SchemaRetriever()
|
| 297 |
+
targets: list[Strategy] = strategies or ["dense", "dense_no_threshold", "mmr", "hybrid", "hybrid_bm25"]
|
| 298 |
+
report: dict[str, dict] = {}
|
| 299 |
+
|
| 300 |
+
for name in targets:
|
| 301 |
+
fn = getattr(retriever, name)
|
| 302 |
+
t0 = time.perf_counter()
|
| 303 |
+
chunks = await fn(query, user_id, k)
|
| 304 |
+
elapsed_ms = round((time.perf_counter() - t0) * 1000)
|
| 305 |
+
|
| 306 |
+
total_chars = sum(len(r.content) for r in chunks)
|
| 307 |
+
report[name] = {
|
| 308 |
+
"chunks": len(chunks),
|
| 309 |
+
"estimated_tokens": total_chars // 4,
|
| 310 |
+
"elapsed_ms": elapsed_ms,
|
| 311 |
+
"results": chunks,
|
| 312 |
+
}
|
| 313 |
+
|
| 314 |
+
return report
|
| 315 |
+
|
| 316 |
|
| 317 |
schema_retriever = SchemaRetriever()
|