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from .base_agent import BaseAgent |
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from rdflib import Graph, Namespace |
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from typing import List, Dict |
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import logging |
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class InteractionAgent(BaseAgent): |
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def __init__(self, rdf_graph: Graph, namespace: Namespace): |
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super().__init__(rdf_graph, namespace) |
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self.query_template = """ |
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PREFIX ns: <http://www.example.org/DrugInteraction.owl#> |
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SELECT DISTINCT ?drug1 ?drug2 |
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WHERE {{ |
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?drug1 ns:hasInteraction ?drug2 . |
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FILTER(STRENDS(str(?drug1), "#{drug}") || STRENDS(str(?drug2), "#{drug}")) |
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}} |
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""" |
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logging.debug("InteractionAgent initialized.") |
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def get_interactions(self, drug_name: str) -> List[Dict[str, str]]: |
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query = self.query_template.format(drug=drug_name) |
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logging.info(f"Fetching interactions for {drug_name}") |
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return self.query_ontology(query) |
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