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1ee0fa8
1
Parent(s):
ca3d0d1
Update app.py
Browse files
app.py
CHANGED
@@ -65,26 +65,39 @@ def generate_heatmap(protein_sequence, start_pos=1, end_pos=None):
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plt.close()
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return temp_file
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def heatmap_interface(sequence, start, end):
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#
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if
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-
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# Generate heatmap
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heatmap_path = generate_heatmap(sequence, start, end)
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return heatmap_path
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# Define the Gradio interface
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iface = gr.Interface(
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fn=heatmap_interface,
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inputs=[
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gr.Textbox(lines=2, placeholder="
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gr.Number(label="Start Position", value=1),
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gr.Number(label="End Position"
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],
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outputs=
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live=True
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)
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# Run the Gradio app
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iface.launch()
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plt.close()
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return temp_file
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def heatmap_interface(sequence, start, end, state):
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# If end is None or greater than sequence length, set it to sequence length
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if end is None or end > len(sequence):
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end = len(sequence)
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state['end'] = end # Update state
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# Ensure start is within bounds
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if start < 1:
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return "Start position is out of bounds."
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# Generate heatmap
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heatmap_path = generate_heatmap(sequence, start, end)
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return heatmap_path, state
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# Initialize state with None for end position
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initial_state = {'end': None}
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# Define the Gradio interface
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iface = gr.Interface(
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fn=heatmap_interface,
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inputs=[
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gr.Textbox(lines=2, placeholder="Enter Protein Sequence Here..."),
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gr.Number(label="Start Position", value=1),
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gr.Number(label="End Position")
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],
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outputs=[
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"image",
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gr.State()
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],
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state=initial_state,
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live=True
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)
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# Run the Gradio app
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iface.launch()
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