Knowledgeable / app.py
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import langchain
#from langchain.embeddings import SentenceTransformerEmbeddings
#from langchain_community.embeddings import HuggingFaceEmbeddings
from langchain_huggingface import HuggingFaceEmbeddings
from langchain_community.document_loaders import UnstructuredPDFLoader,UnstructuredWordDocumentLoader
from langchain.indexes import VectorstoreIndexCreator
from langchain_community.vectorstores import FAISS as LangChainFAISS
from zipfile import ZipFile
import gradio as gr
import openpyxl
import os
import shutil
from langchain.schema import Document
from langchain.text_splitter import RecursiveCharacterTextSplitter
import tiktoken
import secrets
import time
import requests
import tempfile
import spaces
#import faiss as FAISS
from groq import Groq
#from sentence_transformers import SentenceTransformer
tokenizer = tiktoken.encoding_for_model("gpt-3.5-turbo")
# create the length function
def tiktoken_len(text):
tokens = tokenizer.encode(
text,
disallowed_special=()
)
return len(tokens)
text_splitter = RecursiveCharacterTextSplitter(
chunk_size=700,
chunk_overlap=350,
length_function=tiktoken_len,
separators=["\n\n", "\n", " ", ""]
)
#embeddings = SentenceTransformerEmbeddings(model_name="all-MiniLM-L6-v2")
#embeddings = SentenceTransformer('sentence-transformers/all-MiniLM-L6-v2')
embeddings = HuggingFaceEmbeddings(model_name="all-MiniLM-L6-v2",
model_kwargs = {'device': 'cuda'},
encode_kwargs = {'normalize_embeddings': False})
foo = Document(page_content='foo is fou!',metadata={"source":'foo source'})
@spaces.GPU
def similarity_search(db,query, k=4):
return db.similarity_search(query, k)
@spaces.GPU
def similarity_search_with_score(db,query,k=1):
return db.similarity_search_with_score(query,k)
def reset_database(ui_session_id):
session_id = f"PDFAISS-{ui_session_id}"
if 'drive' in session_id:
print("RESET DATABASE: session_id contains 'drive' !!")
return None
try:
shutil.rmtree(session_id)
except:
print(f'no {session_id} directory present')
try:
os.remove(f"{session_id}.zip")
except:
print("no {session_id}.zip present")
return None
def is_duplicate(split_docs,db):
epsilon=0.0
print(f"DUPLICATE: Treating: {split_docs[0].metadata['source'].split('/')[-1]}")
for i in range(min(3,len(split_docs))):
query = split_docs[i].page_content
docs = similarity_search_with_score(db,query,k=1)
_ , score = docs[0]
epsilon += score
print(f"DUPLICATE: epsilon: {epsilon}")
return epsilon < 0.1
def merge_split_docs_to_db(split_docs,db,progress,progress_step=0.1):
progress(progress_step,desc="merging docs")
if len(split_docs)==0:
print("MERGE to db: NO docs!!")
return
filename = split_docs[0].metadata['source']
if is_duplicate(split_docs,db):
print(f"MERGE: Document is duplicated: {filename}")
return
print(f"MERGE: number of split docs: {len(split_docs)}")
batch = 10
for i in range(0, len(split_docs), batch):
progress(i/len(split_docs),desc=f"added {i} chunks of {len(split_docs)} chunks")
#db1 = FAISS.from_documents(split_docs[i:i+batch], embeddings)
#db.merge_from(db1)
#db1.merge_from(db)
db.add_documents(split_docs[i:i+batch])
return db
def merge_pdf_to_db(filename,db,progress,progress_step=0.1):
progress_step+=0.05
progress(progress_step,'unpacking pdf')
doc = UnstructuredPDFLoader(filename).load()
doc[0].metadata['source'] = filename.split('/')[-1]
split_docs = text_splitter.split_documents(doc)
progress_step+=0.3
progress(progress_step,'docx unpacked')
return merge_split_docs_to_db(split_docs,db,progress,progress_step)
def merge_docx_to_db(filename,db,progress,progress_step=0.1):
progress_step+=0.05
progress(progress_step,'unpacking docx')
doc = UnstructuredWordDocumentLoader(filename).load()
doc[0].metadata['source'] = filename.split('/')[-1]
split_docs = text_splitter.split_documents(doc)
progress_step+=0.3
progress(progress_step,'docx unpacked')
return merge_split_docs_to_db(split_docs,db,progress,progress_step)
def merge_txt_to_db(filename,db,progress,progress_step=0.1):
progress_step+=0.05
progress(progress_step,'unpacking txt')
with open(filename) as f:
docs = text_splitter.split_text(f.read())
split_docs = [Document(page_content=doc,metadata={'source':filename.split('/')[-1]}) for doc in docs]
progress_step+=0.3
progress(progress_step,'txt unpacked')
return merge_split_docs_to_db(split_docs,db,progress,progress_step)
def unpack_zip_file(filename:str,db:LangChainFAISS,progress):
with ZipFile(filename, 'r') as zipObj:
contents = zipObj.namelist()
print(f"unpack zip: contents: {contents}")
tmp_directory = filename.split('/')[-1].split('.')[-2]
shutil.unpack_archive(filename, tmp_directory)
if 'index.faiss' in [item.lower() for item in contents]:
db2 = LangChainFAISS.load_local(tmp_directory, embeddings, allow_dangerous_deserialization=True)
#db2.merge_from(db)
return db2
for file in contents:
if file.lower().endswith('.docx'):
db = merge_docx_to_db(f"{tmp_directory}/{file}",db,progress)
if file.lower().endswith('.pdf'):
db = merge_pdf_to_db(f"{tmp_directory}/{file}",db,progress)
if file.lower().endswith('.txt'):
db = merge_txt_to_db(f"{tmp_directory}/{file}",db,progress)
return db
def add_files_to_zip(session_id):
zip_file_name = f"{session_id}.zip"
with ZipFile(zip_file_name, "w") as zipObj:
for root, dirs, files in os.walk(session_id):
for file_name in files:
file_path = os.path.join(root, file_name)
arcname = os.path.relpath(file_path, session_id)
zipObj.write(file_path, arcname)
#### UI Functions ####
def embed_files(files,ui_session_id,progress=gr.Progress(),progress_step=0.05):
if ui_session_id not in os.environ['users'].split(', '):
return "README.md", ""
print(files)
progress(progress_step,desc="Starting...")
split_docs=[]
if len(ui_session_id)==0:
ui_session_id = secrets.token_urlsafe(16)
session_id = f"PDFAISS-{ui_session_id}"
try:
db = LangChainFAISS.load_local(session_id,embeddings, allow_dangerous_deserialization=True)
except:
print(f"SESSION: {session_id} database does not exist, create a FAISS db")
#db = FAISS.from_documents([foo], embeddings)
db = LangChainFAISS.from_texts(["foo is fou!"],embeddings,[{"source":"foo source"}])
db.save_local(session_id)
print(f"SESSION: {session_id} database created")
print("EMBEDDED, before embeddeding: ",session_id,len(db.index_to_docstore_id))
for file_id,file in enumerate(files):
print("ID : ", file_id, "FILE : ", file)
file_type = file.name.split('.')[-1].lower()
source = file.name.split('/')[-1]
print(f"current file: {source}")
progress(file_id/len(files),desc=f"Treating {source}")
if file_type == 'pdf':
db2 = merge_pdf_to_db(file.name,db,progress)
if file_type == 'txt':
db2 = merge_txt_to_db(file.name,db,progress)
if file_type == 'docx':
db2 = merge_docx_to_db(file.name,db,progress)
if file_type == 'zip':
db2 = unpack_zip_file(file.name,db,progress)
if db2 != None:
db = db2
db.save_local(session_id)
### move file to store ###
progress(progress_step, desc = 'moving file to store')
directory_path = f"{session_id}/store/"
if not os.path.exists(directory_path):
os.makedirs(directory_path)
try:
shutil.move(file.name, directory_path)
except:
pass
### load the updated db and zip it ###
progress(progress_step, desc = 'loading db')
db = LangChainFAISS.load_local(session_id,embeddings, allow_dangerous_deserialization=True)
print("EMBEDDED, after embeddeding: ",session_id,len(db.index_to_docstore_id))
progress(progress_step, desc = 'zipping db for download')
add_files_to_zip(session_id)
print(f"EMBEDDED: db zipped")
progress(progress_step, desc = 'db zipped')
return f"{session_id}.zip", ui_session_id, ""
def add_to_db(references,ui_session_id):
files = store_files(references)
return embed_files(files,ui_session_id)
def export_files(references):
files = store_files(references, ret_names=True)
#paths = [file.name for file in files]
return files
def display_docs(docs):
output_str = ''
for i, doc in enumerate(docs):
source = doc.metadata['source'].split('/')[-1]
output_str += f"Ref: {i+1}\n{repr(doc.page_content)}\nSource: {source}\n*§*§*\n"
return output_str
# def display_docs_modal(docs):
# output_list = []
# for i, doc in enumerate(docs):
# source = doc.metadata['source'].split('/')[-1]
# output_str.append(f"Ref: {i+1}\n{repr(doc.page_content)}\nSource: {source}\n*§*§*\n")
# return output_list
def hide_source():
return gr.Markdown(label='Source', visible=False), gr.Button('Hide', visible=False)
def ask_llm(system, user_input):
messages = [
{
"role": "system",
"content": system
},
{
"role": "user",
"content": user_input,
}
]
client = Groq(api_key=os.environ["GROQ_KEY"])
chat_completion = client.chat.completions.create(
messages=messages,
model='mixtral-8x7b-32768',
)
return chat_completion.choices[0].message.content
def ask_llm_stream(system, user_input):
llm_response = ""
client = Groq(api_key=os.environ["GROQ_KEY"])
if user_input is None or user_input == "":
user_input = "What is the introduction of the document about?"
messages = [
{
"role": "system",
"content": system
},
{
"role": "user",
"content": user_input,
}
]
stream = client.chat.completions.create(
messages=messages,
model="llama3-70b-8192",#"mixtral-8x7b-32768",
temperature=0.5,
max_tokens=1024,
top_p=1,
stop=None,
stream=True,
)
for chunk in stream:
llm_response += str(chunk.choices[0].delta.content) if chunk.choices[0].delta.content is not None else ""
yield llm_response
def ask_gpt(query, ui_session_id, history):
if ui_session_id not in os.environ['users'].split(', '):
return "Please Login", "", ""
session_id = f"PDFAISS-{ui_session_id}"
try:
db = LangChainFAISS.load_local(session_id,embeddings, allow_dangerous_deserialization=True)
print("ASKGPT after loading",session_id,len(db.index_to_docstore_id))
except:
print(f"SESSION: {session_id} database does not exist")
return f"SESSION: {session_id} database does not exist","",""
docs = similarity_search(db,query, k=4)
documents = "\n\n*-*-*-*-*-*\n\n".join(f"Content: {doc.page_content}\n" for doc in docs)
system = f"# Instructions\nTake a deep breath and resonate step by step.\nYou are a helpful standard assistant. Your have only one mission and that consists in answering to the user input based on the **provided documents**. If the answer to the question that is asked by the user isn't contained in the **provided documents**, say so but **don't make up an answer**. I chose you because you can say 'I don't know' so please don't do like the other LLMs and don't define acronyms that aren\'t present in the following **PROVIDED DOCUMENTS** double check if it is present before answering. If some of the information can be useful for the user you can tell him.\nFinish your response by **ONE** follow up question that the provided documents could answer.\n\nThe documents are separated by the string \'*-*-*-*-*-*\'. Do not provide any explanations or details.\n\n# **Provided documents**: {documents}."
gen = ask_llm_stream(system, query)
last_value=""
displayable_docs = display_docs(docs)
yn_display = len(docs)*[True]+(5-len(docs))*[False]
while True:
try:
last_value = next(gen)
yield last_value, displayable_docs, history + f"[query]\n{query}\n[answer]\n{last_value}\n[references]\n{displayable_docs}\n\n", gr.Button("Ref 1", visible=yn_display[0]), gr.Button("Ref 2", visible=yn_display[1]), gr.Button("Ref 3", visible=yn_display[2]), gr.Button("Ref 4", visible=yn_display[3]), gr.Button("Ref 5", visible=yn_display[4])
except StopIteration as e:
break
history += f"[query]\n{query}\n[answer]\n{last_value}\n[references]\n{displayable_docs}\n\n"
return last_value, displayable_docs, history, gr.Button("Ref 1", visible=yn_display[0]), gr.Button("Ref 2", visible=yn_display[1]), gr.Button("Ref 3", visible=yn_display[2]), gr.Button("Ref 4", visible=yn_display[3]), gr.Button("Ref 5", visible=yn_display[4])
def auth_user(ui_session_id):
if ui_session_id in os.environ['users'].split(', '):
return gr.Textbox(label='Username', visible=False), gr.File(file_count="multiple", file_types=[".txt", ".pdf",".zip",".docx"], visible=True), gr.Button("Reset AI Knowledge", visible=True), gr.Markdown(label='AI Answer', visible=True), gr.Textbox(placeholder="Type your question", label="Question ❔", scale=9, visible=True), gr.Button("▶", scale=1, visible=True), gr.Textbox(label='Sources', show_copy_button=True, visible=True), gr.File(label="Zipped database", visible=True), gr.Textbox(label='History', show_copy_button=True, visible=True)
else:
return gr.Textbox(label='Username', visible=True), gr.File(file_count="multiple", file_types=[".txt", ".pdf",".zip",".docx"], visible=False), gr.Button("Reset AI Knowledge", visible=False), gr.Markdown(label='AI Answer', visible=False), gr.Textbox(placeholder="Type your question", label="Question ❔", scale=9, visible=False), gr.Button("▶", scale=1, visible=False), gr.Textbox(label='Sources', show_copy_button=True, visible=False), gr.File(label="Zipped database", visible=False), gr.Textbox(label='History', show_copy_button=True, visible=False)
def display_info0(documents):
try:
return gr.Markdown(value=documents.split("\n*§*§*\n")[0], label='Source', visible=True), gr.Button('Hide', visible=True)
except Exception as e:
gr.Info("No Document")
return gr.Markdown(label='Source', visible=False), gr.Button('Hide', visible=False)
def display_info1(documents):
try:
return gr.Markdown(value=documents.split("\n*§*§*\n")[1], label='Source', visible=True), gr.Button('Hide', visible=True)
except Exception as e:
gr.Info("No Document")
return gr.Markdown(label='Source', visible=False), gr.Button('Hide', visible=False)
def display_info2(documents):
try:
return gr.Markdown(value=documents.split("\n*§*§*\n")[2], label='Source', visible=True), gr.Button('Hide', visible=True)
except Exception as e:
gr.Info("No Document")
return gr.Markdown(label='Source', visible=False), gr.Button('Hide', visible=False)
def display_info3(documents):
try:
return gr.Markdown(value=documents.split("\n*§*§*\n")[3], label='Source', visible=True), gr.Button('Hide', visible=True)
except Exception as e:
gr.Info("No Document")
return gr.Markdown(label='Source', visible=False), gr.Button('Hide', visible=False)
def display_info4(documents):
try:
return gr.Markdown(value=documents.split("\n*§*§*\n")[4], label='Source', visible=True), gr.Button('Hide', visible=True)
except Exception as e:
gr.Info("No Document")
return gr.Markdown(label='Source', visible=False), gr.Button('Hide', visible=False)
with gr.Blocks() as demo:
gr.Markdown("# Enrich an LLM knowledge with your own documents 🧠🤖")
with gr.Column():
tb_session_id = gr.Textbox(label='Username')
docs_input = gr.File(file_count="multiple", file_types=[".txt", ".pdf",".zip",".docx"], visible=False)
btn_reset_db = gr.Button("Reset AI Knowledge", visible=False)
with gr.Column():
answer_output = gr.Markdown(label='AI Answer', visible=False)
btn_hide_source = gr.Button('Hide', visible=False)
md_ref = gr.Markdown(label='Source', visible=False)
with gr.Row():
query_input = gr.Textbox(placeholder="Type your question", label="Question ❔", scale=9, visible=False)
btn_askGPT = gr.Button("▶", scale=1, visible=False)
with gr.Row():
btn1 = gr.Button("Ref 1", visible=False)
btn2 = gr.Button("Ref 2", visible=False)
btn3 = gr.Button("Ref 3", visible=False)
btn4 = gr.Button("Ref 4", visible=False)
btn5 = gr.Button("Ref 5", visible=False)
tb_sources = gr.Textbox(label='Sources', show_copy_button=True, visible=False)
with gr.Accordion("Download your knowledge base and see your conversation history", open=False):
db_output = gr.File(label="Zipped database", visible=False)
tb_history = gr.Textbox(label='History', show_copy_button=True, visible=False, interactive=False)
tb_session_id.submit(auth_user, inputs=tb_session_id, outputs=[tb_session_id, docs_input, btn_reset_db, answer_output, query_input, btn_askGPT, tb_sources, db_output, tb_history])
docs_input.upload(embed_files, inputs=[docs_input,tb_session_id], outputs=[db_output,tb_session_id, query_input])
btn_reset_db.click(reset_database,inputs=[tb_session_id],outputs=[db_output])
btn_askGPT.click(ask_gpt, inputs=[query_input, tb_session_id, tb_history], outputs=[answer_output, tb_sources, tb_history, btn1, btn2, btn3, btn4, btn5])
query_input.submit(ask_gpt, inputs=[query_input, tb_session_id, tb_history], outputs=[answer_output, tb_sources, tb_history, btn1, btn2, btn3, btn4, btn5])
btn1.click(display_info0, inputs=tb_sources, outputs=[md_ref, btn_hide_source])
btn2.click(display_info1, inputs=tb_sources, outputs=[md_ref, btn_hide_source])
btn3.click(display_info2, inputs=tb_sources, outputs=[md_ref, btn_hide_source])
btn4.click(display_info3, inputs=tb_sources, outputs=[md_ref, btn_hide_source])
btn5.click(display_info4, inputs=tb_sources, outputs=[md_ref, btn_hide_source])
btn_hide_source.click(hide_source, inputs=None, outputs=[md_ref, btn_hide_source])
demo.launch(share=True)