VenusFactory / script /get_structure_seq /get_esm3_structure_seq.sh
2dogey's picture
Upload folder using huggingface_hub
8918ac7 verified
raw
history blame contribute delete
210 Bytes
dataset=deeploc
pdb_type=alphafold
CUDA_VISIBLE_DEVICES=0 python src/data/get_esm3_structure_seq.py \
--pdb_dir data/raw/$dataset/"$pdb_type"_pdb \
--out_file data/raw/$dataset/"$pdb_type"_esm3.json