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Runtime error
export HF_ENDPOINT=https://hf-mirror.com | |
dataset=DeepLocBinary | |
pdb_type=AlphaFold2 | |
plm_model=esm2_t6_8M_UR50D | |
model_path=ckpt/dev_models/DLB_AF2_ESM2_8M_SES.pt | |
python src/eval.py \ | |
--eval_method ses-adapter \ | |
--plm_model facebook/$plm_model \ | |
--problem_type single_label_classification \ | |
--test_file tyang816/DeepLocBinary_AlphaFold2 \ | |
--dataset $dataset \ | |
--model_path $model_path \ | |
--batch_token 12000 \ | |
--structure_seq foldseek_seq,ss8_seq \ | |
--metrics accuracy,auroc,f1,precision,recall \ | |
--test_result_dir result/$dataset/$plm_model/$pdb_type |