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README.md

@@ -6,8 +6,8 @@ tags:
 - genomics
 - single-cell
 - model_cls_name:SCANVI
-- scvi_version:0.20.0
-- anndata_version:0.8.0
+- scvi_version:1.1.0
+- anndata_version:0.10.3
 - modality:rna
 - tissue:Small_Intestine
 - annotated:True
@@ -15,7 +15,7 @@ tags:
 
 # Description
 
-Tabula sapiens. An across organ dataset of cell-types in human tissues.
+To be added...
 
 # Model properties
 
@@ -30,6 +30,7 @@ Many model properties are in the model tags. Some more are listed below.
     "dropout_rate": 0.05,
     "dispersion": "gene",
     "gene_likelihood": "nb",
+    "linear_classifier": false,
     "latent_distribution": "normal",
     "use_batch_norm": "none",
     "use_layer_norm": "both",
@@ -53,11 +54,11 @@ Many model properties are in the model tags. Some more are listed below.
 **model_summary_stats**:
 |     Summary Stat Key     | Value |
 |--------------------------|-------|
-|         n_batch          |   4   |
-|         n_cells          | 13488 |
+|         n_batch          |   2   |
+|         n_cells          | 10458 |
 | n_extra_categorical_covs |   0   |
 | n_extra_continuous_covs  |   0   |
-|         n_labels         |  15   |
+|         n_labels         |  17   |
 |       n_latent_qzm       |  20   |
 |       n_latent_qzv       |  20   |
 |          n_vars          | 4000  |
@@ -86,14 +87,14 @@ to host on the huggingface Model hub.
 sure to provide this field if you want users to be able to access your training data. See the scvi-tools
 documentation for details. -->
 
-Training data url: https://zenodo.org/api/files/fd2c61e6-f4cd-4984-ade0-24d26d9adef6/TS_Small_Intestine_filtered.h5ad
+Training data url: N/A
 
 # Training code
 
 This is an optional link to the code used to train the model.
 
-Training code url: https://github.com/scvi-hub-references/tabula_sapiens/main.py
+Training code url: N/A
 
 # References
 
-The Tabula Sapiens: A multi-organ, single-cell transcriptomic atlas of humans. The Tabula Sapiens Consortium. Science 2022.05.13; doi: https: //doi.org/10.1126/science.abl4896
+To be added...