canergen commited on
Commit
e89eb39
1 Parent(s): c3923ce

Upload README.md with huggingface_hub

Browse files
Files changed (1) hide show
  1. README.md +22 -22
README.md CHANGED
@@ -54,10 +54,10 @@ space might still be useful for analysis.
54
 
55
  | Metric | Training Value | Validation Value |
56
  |-------------------------|----------------|------------------|
57
- | Mean Absolute Error | 2.29 | 2.31 |
58
- | Pearson Correlation | 0.85 | 0.84 |
59
- | Spearman Correlation | 0.86 | 0.85 |
60
- | R² (R-Squared) | 0.54 | 0.57 |
61
 
62
  The gene-wise coefficient of variation summarizes how well variation between different genes is
63
  preserved by the generated model expression. This value is usually quite high.
@@ -66,10 +66,10 @@ preserved by the generated model expression. This value is usually quite high.
66
 
67
  | Metric | Training Value |
68
  |-------------------------|----------------|
69
- | Mean Absolute Error | 12.66 |
70
- | Pearson Correlation | 0.62 |
71
- | Spearman Correlation | 0.69 |
72
- | R² (R-Squared) | -0.87 |
73
 
74
  </details>
75
 
@@ -86,20 +86,20 @@ cell-type.
86
 
87
  | Index | gene_f1 | lfc_mae | lfc_pearson | lfc_spearman | roc_auc | pr_auc | n_cells |
88
  | --- | --- | --- | --- | --- | --- | --- | --- |
89
- | neutrophil | 0.94 | 1.88 | 0.72 | 0.90 | 0.18 | 0.84 | 2911.00 |
90
- | CD4-positive, alpha-beta T cell | 0.94 | 2.03 | 0.59 | 0.90 | 0.33 | 0.79 | 2025.00 |
91
- | monocyte | 0.89 | 1.68 | 0.68 | 0.90 | 0.39 | 0.77 | 1389.00 |
92
- | CD8-positive, alpha-beta T cell | 0.87 | 2.92 | 0.59 | 0.86 | 0.32 | 0.74 | 1147.00 |
93
- | granulocyte | 0.78 | 2.44 | 0.61 | 0.89 | 0.45 | 0.83 | 853.00 |
94
- | plasma cell | 0.80 | 2.29 | 0.72 | 0.92 | 0.19 | 0.85 | 825.00 |
95
- | erythroid progenitor cell | 0.61 | 2.36 | 0.70 | 0.92 | 0.49 | 0.89 | 757.00 |
96
- | mature NK T cell | 0.80 | 3.67 | 0.59 | 0.79 | 0.33 | 0.69 | 678.00 |
97
- | hematopoietic stem cell | 0.87 | 2.24 | 0.66 | 0.89 | 0.53 | 0.85 | 617.00 |
98
- | memory B cell | 0.85 | 4.27 | 0.59 | 0.71 | 0.32 | 0.69 | 310.00 |
99
- | common myeloid progenitor | 0.76 | 2.67 | 0.71 | 0.90 | 0.54 | 0.88 | 287.00 |
100
- | macrophage | 0.87 | 4.32 | 0.64 | 0.70 | 0.34 | 0.78 | 265.00 |
101
- | naive B cell | 0.91 | 5.25 | 0.60 | 0.67 | 0.26 | 0.66 | 142.00 |
102
- | erythrocyte | 0.91 | 4.97 | 0.57 | 0.52 | 0.31 | 0.90 | 87.00 |
103
 
104
  </details>
105
 
 
54
 
55
  | Metric | Training Value | Validation Value |
56
  |-------------------------|----------------|------------------|
57
+ | Mean Absolute Error | 2.27 | 2.22 |
58
+ | Pearson Correlation | 0.85 | 0.86 |
59
+ | Spearman Correlation | 0.86 | 0.86 |
60
+ | R² (R-Squared) | 0.56 | 0.59 |
61
 
62
  The gene-wise coefficient of variation summarizes how well variation between different genes is
63
  preserved by the generated model expression. This value is usually quite high.
 
66
 
67
  | Metric | Training Value |
68
  |-------------------------|----------------|
69
+ | Mean Absolute Error | 12.62 |
70
+ | Pearson Correlation | 0.61 |
71
+ | Spearman Correlation | 0.68 |
72
+ | R² (R-Squared) | -0.89 |
73
 
74
  </details>
75
 
 
86
 
87
  | Index | gene_f1 | lfc_mae | lfc_pearson | lfc_spearman | roc_auc | pr_auc | n_cells |
88
  | --- | --- | --- | --- | --- | --- | --- | --- |
89
+ | neutrophil | 0.94 | 2.00 | 0.70 | 0.90 | 0.18 | 0.84 | 2911.00 |
90
+ | CD4-positive, alpha-beta T cell | 0.90 | 1.95 | 0.63 | 0.91 | 0.33 | 0.79 | 2025.00 |
91
+ | monocyte | 0.88 | 1.72 | 0.67 | 0.89 | 0.40 | 0.78 | 1389.00 |
92
+ | CD8-positive, alpha-beta T cell | 0.88 | 2.99 | 0.57 | 0.85 | 0.32 | 0.74 | 1147.00 |
93
+ | granulocyte | 0.78 | 2.43 | 0.62 | 0.88 | 0.46 | 0.83 | 853.00 |
94
+ | plasma cell | 0.82 | 2.27 | 0.72 | 0.92 | 0.20 | 0.85 | 825.00 |
95
+ | erythroid progenitor cell | 0.60 | 2.27 | 0.71 | 0.93 | 0.48 | 0.89 | 757.00 |
96
+ | mature NK T cell | 0.78 | 3.78 | 0.57 | 0.79 | 0.33 | 0.69 | 678.00 |
97
+ | hematopoietic stem cell | 0.88 | 2.28 | 0.66 | 0.89 | 0.53 | 0.85 | 617.00 |
98
+ | memory B cell | 0.89 | 4.26 | 0.59 | 0.71 | 0.32 | 0.69 | 310.00 |
99
+ | common myeloid progenitor | 0.71 | 2.69 | 0.71 | 0.89 | 0.55 | 0.88 | 287.00 |
100
+ | macrophage | 0.84 | 4.07 | 0.67 | 0.72 | 0.33 | 0.78 | 265.00 |
101
+ | naive B cell | 0.88 | 5.06 | 0.62 | 0.68 | 0.26 | 0.66 | 142.00 |
102
+ | erythrocyte | 0.90 | 4.93 | 0.57 | 0.52 | 0.28 | 0.89 | 87.00 |
103
 
104
  </details>
105