Upload 6 files
Browse files- config.json +31 -0
- pytorch_model.bin +3 -0
- special_tokens_map.json +128 -0
- tokenizer.json +1951 -0
- tokenizer_config.json +1333 -0
- train.log +84 -0
config.json
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{
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"_name_or_path": "sagawa/CompoundT5",
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"architectures": [
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"T5ForConditionalGeneration"
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],
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"classifier_dropout": 0.0,
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"d_ff": 2048,
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"d_kv": 64,
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"d_model": 768,
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"decoder_start_token_id": 0,
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"dense_act_fn": "gelu_new",
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"dropout_rate": 0.1,
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"eos_token_id": 1,
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"feed_forward_proj": "gated-gelu",
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"initializer_factor": 1.0,
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"is_encoder_decoder": true,
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"is_gated_act": true,
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"layer_norm_epsilon": 1e-06,
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"model_type": "t5",
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"num_decoder_layers": 12,
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"num_heads": 12,
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"num_layers": 12,
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"output_past": true,
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"pad_token_id": 0,
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"relative_attention_max_distance": 128,
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"relative_attention_num_buckets": 32,
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"tie_word_embeddings": false,
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"transformers_version": "4.40.2",
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"use_cache": true,
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"vocab_size": 269
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}
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pytorch_model.bin
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version https://git-lfs.github.com/spec/v1
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oid sha256:29f5cc9a91aaa74b768d348d18f1bf0e01914f480102cf94142015a6a52cb3d9
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size 800968726
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special_tokens_map.json
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{
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"additional_special_tokens": [
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"<extra_id_0>",
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"<extra_id_1>",
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"<extra_id_2>",
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"<extra_id_3>",
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"<extra_id_4>",
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"<extra_id_5>",
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"<extra_id_6>",
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"<extra_id_7>",
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"<extra_id_8>",
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"<extra_id_9>",
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"<extra_id_10>",
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"<extra_id_11>",
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"<extra_id_12>",
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"<extra_id_13>",
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"<extra_id_14>",
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"<extra_id_15>",
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"<extra_id_16>",
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"<extra_id_17>",
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"<extra_id_18>",
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"<extra_id_19>",
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"<extra_id_20>",
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"<extra_id_21>",
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"<extra_id_22>",
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"<extra_id_23>",
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"<extra_id_24>",
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"<extra_id_25>",
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"<extra_id_26>",
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"<extra_id_27>",
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"<extra_id_28>",
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"<extra_id_29>",
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"<extra_id_30>",
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"<extra_id_31>",
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"<extra_id_32>",
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"<extra_id_33>",
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"<extra_id_34>",
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"<extra_id_35>",
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"<extra_id_36>",
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"<extra_id_37>",
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"<extra_id_38>",
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"<extra_id_39>",
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"<extra_id_40>",
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"<extra_id_41>",
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"<extra_id_42>",
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"<extra_id_43>",
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"<extra_id_44>",
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"<extra_id_45>",
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"<extra_id_46>",
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"<extra_id_47>",
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"<extra_id_48>",
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"<extra_id_49>",
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"<extra_id_50>",
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"<extra_id_51>",
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"<extra_id_52>",
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"<extra_id_53>",
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"<extra_id_54>",
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"<extra_id_55>",
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"<extra_id_56>",
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"<extra_id_57>",
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"<extra_id_58>",
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"<extra_id_59>",
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"<extra_id_60>",
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"<extra_id_61>",
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"<extra_id_62>",
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"<extra_id_63>",
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"<extra_id_64>",
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"<extra_id_65>",
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"<extra_id_66>",
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"<extra_id_67>",
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"<extra_id_68>",
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"<extra_id_69>",
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"<extra_id_70>",
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"<extra_id_71>",
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"<extra_id_72>",
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"<extra_id_73>",
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"<extra_id_74>",
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"<extra_id_75>",
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"<extra_id_76>",
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"<extra_id_77>",
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"<extra_id_78>",
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"<extra_id_79>",
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"<extra_id_80>",
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"<extra_id_81>",
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"<extra_id_82>",
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"<extra_id_83>",
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"<extra_id_84>",
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"<extra_id_85>",
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"<extra_id_86>",
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"<extra_id_87>",
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"<extra_id_88>",
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"<extra_id_89>",
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"<extra_id_90>",
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"<extra_id_91>",
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"<extra_id_92>",
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"<extra_id_93>",
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"<extra_id_94>",
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"<extra_id_95>",
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"<extra_id_96>",
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"<extra_id_97>",
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"<extra_id_98>",
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"<extra_id_99>",
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"REACTANT:",
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"PRODUCT:",
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"REAGENT:"
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],
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"eos_token": {
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"content": "</s>",
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"lstrip": false,
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"normalized": false,
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"rstrip": false,
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"single_word": false
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},
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"pad_token": {
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"content": "<pad>",
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"lstrip": false,
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"normalized": false,
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"rstrip": false,
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"single_word": false
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},
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"unk_token": {
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"content": "<unk>",
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"lstrip": false,
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"normalized": false,
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"rstrip": false,
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"single_word": false
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}
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}
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tokenizer.json
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|
1 |
+
{
|
2 |
+
"version": "1.0",
|
3 |
+
"truncation": null,
|
4 |
+
"padding": null,
|
5 |
+
"added_tokens": [
|
6 |
+
{
|
7 |
+
"id": 0,
|
8 |
+
"content": "<pad>",
|
9 |
+
"single_word": false,
|
10 |
+
"lstrip": false,
|
11 |
+
"rstrip": false,
|
12 |
+
"normalized": false,
|
13 |
+
"special": true
|
14 |
+
},
|
15 |
+
{
|
16 |
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],
|
1924 |
+
[
|
1925 |
+
"CCCCN",
|
1926 |
+
-11.273835881601958
|
1927 |
+
],
|
1928 |
+
[
|
1929 |
+
"▁CCCCN",
|
1930 |
+
-11.694782342260607
|
1931 |
+
],
|
1932 |
+
[
|
1933 |
+
"CCOCCN",
|
1934 |
+
-11.98760417613926
|
1935 |
+
],
|
1936 |
+
[
|
1937 |
+
"r",
|
1938 |
+
-12.313357692926305
|
1939 |
+
],
|
1940 |
+
[
|
1941 |
+
"B",
|
1942 |
+
-12.313457692926304
|
1943 |
+
],
|
1944 |
+
[
|
1945 |
+
"CCCCO",
|
1946 |
+
-12.313457692926304
|
1947 |
+
]
|
1948 |
+
],
|
1949 |
+
"byte_fallback": false
|
1950 |
+
}
|
1951 |
+
}
|
tokenizer_config.json
ADDED
@@ -0,0 +1,1333 @@
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1 |
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|
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|
1333 |
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}
|
train.log
ADDED
@@ -0,0 +1,84 @@
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|
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|
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|
|
|
|
|
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|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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Epoch 1 - avg_train_loss: 0.0594 val_rmse_loss: 0.0577 val_r2_score: 0.1737 time: 7926s
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Epoch 1 - Save Lowest Loss: 0.0577 Model
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Epoch 2 - avg_train_loss: 0.0567 val_rmse_loss: 0.0569 val_r2_score: 0.1860 time: 7928s
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Epoch 2 - Save Lowest Loss: 0.0569 Model
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Epoch 3 - avg_train_loss: 0.0553 val_rmse_loss: 0.0544 val_r2_score: 0.2206 time: 7924s
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Epoch 3 - Save Lowest Loss: 0.0544 Model
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Epoch 4 - avg_train_loss: 0.0546 val_rmse_loss: 0.0549 val_r2_score: 0.2146 time: 7925s
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Epoch 5 - avg_train_loss: 0.0540 val_rmse_loss: 0.0537 val_r2_score: 0.2309 time: 7924s
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Epoch 5 - Save Lowest Loss: 0.0537 Model
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Epoch 6 - avg_train_loss: 0.0536 val_rmse_loss: 0.0537 val_r2_score: 0.2314 time: 7923s
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Epoch 6 - Save Lowest Loss: 0.0537 Model
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Epoch 7 - avg_train_loss: 0.0534 val_rmse_loss: 0.0539 val_r2_score: 0.2283 time: 7924s
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Epoch 8 - avg_train_loss: 0.0530 val_rmse_loss: 0.0542 val_r2_score: 0.2244 time: 7923s
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Epoch 9 - avg_train_loss: 0.0529 val_rmse_loss: 0.0535 val_r2_score: 0.2340 time: 7923s
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Epoch 9 - Save Lowest Loss: 0.0535 Model
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Epoch 10 - avg_train_loss: 0.0528 val_rmse_loss: 0.0530 val_r2_score: 0.2414 time: 7922s
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Epoch 10 - Save Lowest Loss: 0.0530 Model
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Epoch 11 - avg_train_loss: 0.0527 val_rmse_loss: 0.0532 val_r2_score: 0.2382 time: 7921s
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Epoch 12 - avg_train_loss: 0.0526 val_rmse_loss: 0.0530 val_r2_score: 0.2413 time: 7923s
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Epoch 13 - avg_train_loss: 0.0525 val_rmse_loss: 0.0548 val_r2_score: 0.2149 time: 7923s
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Epoch 14 - avg_train_loss: 0.0523 val_rmse_loss: 0.0537 val_r2_score: 0.2314 time: 7920s
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Epoch 15 - avg_train_loss: 0.0522 val_rmse_loss: 0.0536 val_r2_score: 0.2325 time: 7922s
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Epoch 16 - avg_train_loss: 0.0521 val_rmse_loss: 0.0542 val_r2_score: 0.2234 time: 7924s
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Epoch 17 - avg_train_loss: 0.0519 val_rmse_loss: 0.0533 val_r2_score: 0.2364 time: 7924s
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Epoch 18 - avg_train_loss: 0.0518 val_rmse_loss: 0.0532 val_r2_score: 0.2380 time: 7923s
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Epoch 19 - avg_train_loss: 0.0516 val_rmse_loss: 0.0541 val_r2_score: 0.2254 time: 7920s
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Epoch 20 - avg_train_loss: 0.0515 val_rmse_loss: 0.0526 val_r2_score: 0.2475 time: 7919s
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Epoch 20 - Save Lowest Loss: 0.0526 Model
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Epoch 21 - avg_train_loss: 0.0513 val_rmse_loss: 0.0525 val_r2_score: 0.2479 time: 7915s
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Epoch 21 - Save Lowest Loss: 0.0525 Model
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Epoch 22 - avg_train_loss: 0.0511 val_rmse_loss: 0.0521 val_r2_score: 0.2535 time: 7913s
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Epoch 22 - Save Lowest Loss: 0.0521 Model
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Epoch 23 - avg_train_loss: 0.0510 val_rmse_loss: 0.0535 val_r2_score: 0.2344 time: 7922s
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Epoch 24 - avg_train_loss: 0.0508 val_rmse_loss: 0.0529 val_r2_score: 0.2430 time: 7922s
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Epoch 25 - avg_train_loss: 0.0506 val_rmse_loss: 0.0524 val_r2_score: 0.2505 time: 7920s
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Epoch 26 - avg_train_loss: 0.0505 val_rmse_loss: 0.0520 val_r2_score: 0.2551 time: 7921s
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Epoch 26 - Save Lowest Loss: 0.0520 Model
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Epoch 27 - avg_train_loss: 0.0503 val_rmse_loss: 0.0527 val_r2_score: 0.2461 time: 7918s
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Epoch 28 - avg_train_loss: 0.0502 val_rmse_loss: 0.0516 val_r2_score: 0.2606 time: 7914s
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Epoch 28 - Save Lowest Loss: 0.0516 Model
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Epoch 29 - avg_train_loss: 0.0500 val_rmse_loss: 0.0521 val_r2_score: 0.2547 time: 7914s
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Epoch 30 - avg_train_loss: 0.0497 val_rmse_loss: 0.0519 val_r2_score: 0.2576 time: 7913s
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Epoch 31 - avg_train_loss: 0.0496 val_rmse_loss: 0.0516 val_r2_score: 0.2615 time: 7913s
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Epoch 31 - Save Lowest Loss: 0.0516 Model
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Epoch 32 - avg_train_loss: 0.0494 val_rmse_loss: 0.0521 val_r2_score: 0.2547 time: 7919s
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Loaded checkpoint from /home/acf15718oa/ReactionT5_neword/yield_prediction/checkpoint.pth.tar
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Loaded optimizer from /home/acf15718oa/ReactionT5_neword/yield_prediction/checkpoint.pth.tar
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Loaded scheduler from /home/acf15718oa/ReactionT5_neword/yield_prediction/checkpoint.pth.tar
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Epoch 33 - avg_train_loss: 0.0492 val_rmse_loss: 0.0510 val_r2_score: 0.2692 time: 7900s
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Epoch 33 - Save Lowest Loss: 0.0510 Model
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Epoch 34 - avg_train_loss: 0.0490 val_rmse_loss: 0.0513 val_r2_score: 0.2653 time: 7892s
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Epoch 35 - avg_train_loss: 0.0488 val_rmse_loss: 0.0515 val_r2_score: 0.2626 time: 7891s
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Epoch 36 - avg_train_loss: 0.0486 val_rmse_loss: 0.0511 val_r2_score: 0.2688 time: 7886s
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Epoch 37 - avg_train_loss: 0.0485 val_rmse_loss: 0.0512 val_r2_score: 0.2670 time: 7887s
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Epoch 38 - avg_train_loss: 0.0482 val_rmse_loss: 0.0514 val_r2_score: 0.2638 time: 7891s
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Epoch 39 - avg_train_loss: 0.0480 val_rmse_loss: 0.0515 val_r2_score: 0.2624 time: 7887s
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Epoch 40 - avg_train_loss: 0.0478 val_rmse_loss: 0.0522 val_r2_score: 0.2528 time: 7891s
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Epoch 41 - avg_train_loss: 0.0475 val_rmse_loss: 0.0509 val_r2_score: 0.2716 time: 7891s
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Epoch 41 - Save Lowest Loss: 0.0509 Model
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Epoch 42 - avg_train_loss: 0.0472 val_rmse_loss: 0.0508 val_r2_score: 0.2729 time: 7887s
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Epoch 42 - Save Lowest Loss: 0.0508 Model
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Epoch 43 - avg_train_loss: 0.0470 val_rmse_loss: 0.0521 val_r2_score: 0.2544 time: 7891s
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Epoch 44 - avg_train_loss: 0.0468 val_rmse_loss: 0.0506 val_r2_score: 0.2760 time: 7891s
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Epoch 44 - Save Lowest Loss: 0.0506 Model
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Epoch 45 - avg_train_loss: 0.0465 val_rmse_loss: 0.0516 val_r2_score: 0.2611 time: 7886s
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Epoch 46 - avg_train_loss: 0.0462 val_rmse_loss: 0.0513 val_r2_score: 0.2652 time: 7891s
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Epoch 47 - avg_train_loss: 0.0459 val_rmse_loss: 0.0503 val_r2_score: 0.2797 time: 7887s
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Epoch 47 - Save Lowest Loss: 0.0503 Model
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Epoch 48 - avg_train_loss: 0.0457 val_rmse_loss: 0.0510 val_r2_score: 0.2699 time: 7888s
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Epoch 49 - avg_train_loss: 0.0453 val_rmse_loss: 0.0507 val_r2_score: 0.2737 time: 7887s
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Epoch 50 - avg_train_loss: 0.0449 val_rmse_loss: 0.0506 val_r2_score: 0.2759 time: 7887s
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Epoch 51 - avg_train_loss: 0.0447 val_rmse_loss: 0.0512 val_r2_score: 0.2665 time: 7887s
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Epoch 52 - avg_train_loss: 0.0443 val_rmse_loss: 0.0502 val_r2_score: 0.2808 time: 7887s
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Epoch 52 - Save Lowest Loss: 0.0502 Model
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Epoch 53 - avg_train_loss: 0.0439 val_rmse_loss: 0.0507 val_r2_score: 0.2740 time: 7902s
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Epoch 54 - avg_train_loss: 0.0435 val_rmse_loss: 0.0506 val_r2_score: 0.2749 time: 7904s
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Epoch 55 - avg_train_loss: 0.0431 val_rmse_loss: 0.0504 val_r2_score: 0.2783 time: 7903s
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Epoch 56 - avg_train_loss: 0.0427 val_rmse_loss: 0.0506 val_r2_score: 0.2757 time: 7904s
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Epoch 57 - avg_train_loss: 0.0422 val_rmse_loss: 0.0504 val_r2_score: 0.2788 time: 7901s
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Epoch 58 - avg_train_loss: 0.0418 val_rmse_loss: 0.0509 val_r2_score: 0.2716 time: 7902s
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Epoch 59 - avg_train_loss: 0.0413 val_rmse_loss: 0.0516 val_r2_score: 0.2613 time: 7901s
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Epoch 60 - avg_train_loss: 0.0408 val_rmse_loss: 0.0508 val_r2_score: 0.2728 time: 7897s
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Epoch 61 - avg_train_loss: 0.0403 val_rmse_loss: 0.0504 val_r2_score: 0.2791 time: 7888s
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Epoch 62 - avg_train_loss: 0.0396 val_rmse_loss: 0.0519 val_r2_score: 0.2567 time: 7886s
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