roscazo commited on
Commit
8df681e
1 Parent(s): d314745

vih_explainability

Browse files
README.md ADDED
@@ -0,0 +1,80 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ ---
2
+ license: apache-2.0
3
+ base_model: PlanTL-GOB-ES/bsc-bio-ehr-es
4
+ tags:
5
+ - generated_from_trainer
6
+ metrics:
7
+ - precision
8
+ - recall
9
+ - f1
10
+ model-index:
11
+ - name: vih_explainability
12
+ results: []
13
+ ---
14
+
15
+ <!-- This model card has been generated automatically according to the information the Trainer had access to. You
16
+ should probably proofread and complete it, then remove this comment. -->
17
+
18
+ # vih_explainability
19
+
20
+ This model is a fine-tuned version of [PlanTL-GOB-ES/bsc-bio-ehr-es](https://huggingface.co/PlanTL-GOB-ES/bsc-bio-ehr-es) on the None dataset.
21
+ It achieves the following results on the evaluation set:
22
+ - Loss: 0.3980
23
+ - Roc Auc: 0.8920
24
+ - Ap Score: 0.8575
25
+ - Precision: 0.8926
26
+ - Recall: 0.8920
27
+ - F1: 0.8919
28
+
29
+ ## Model description
30
+
31
+ More information needed
32
+
33
+ ## Intended uses & limitations
34
+
35
+ More information needed
36
+
37
+ ## Training and evaluation data
38
+
39
+ More information needed
40
+
41
+ ## Training procedure
42
+
43
+ ### Training hyperparameters
44
+
45
+ The following hyperparameters were used during training:
46
+ - learning_rate: 9e-06
47
+ - train_batch_size: 8
48
+ - eval_batch_size: 8
49
+ - seed: 42
50
+ - optimizer: Adam with betas=(0.9,0.999) and epsilon=1e-08
51
+ - lr_scheduler_type: linear
52
+ - num_epochs: 10
53
+
54
+ ### Training results
55
+
56
+ | Training Loss | Epoch | Step | Validation Loss | Roc Auc | Ap Score | Precision | Recall | F1 |
57
+ |:-------------:|:------:|:----:|:---------------:|:-------:|:--------:|:---------:|:------:|:------:|
58
+ | 0.62 | 0.5376 | 50 | 0.5331 | 0.7789 | 0.7389 | 0.7905 | 0.7789 | 0.7763 |
59
+ | 0.5106 | 1.0753 | 100 | 0.4343 | 0.7899 | 0.7614 | 0.8118 | 0.7899 | 0.7856 |
60
+ | 0.3762 | 1.6129 | 150 | 0.3364 | 0.8594 | 0.8075 | 0.8596 | 0.8594 | 0.8594 |
61
+ | 0.2878 | 2.1505 | 200 | 0.3582 | 0.8597 | 0.8260 | 0.8636 | 0.8597 | 0.8591 |
62
+ | 0.2556 | 2.6882 | 250 | 0.3121 | 0.8706 | 0.8440 | 0.8764 | 0.8706 | 0.8698 |
63
+ | 0.165 | 3.2258 | 300 | 0.3746 | 0.8652 | 0.8349 | 0.8699 | 0.8652 | 0.8645 |
64
+ | 0.2125 | 3.7634 | 350 | 0.3842 | 0.8815 | 0.8629 | 0.8898 | 0.8815 | 0.8805 |
65
+ | 0.1923 | 4.3011 | 400 | 0.3178 | 0.9080 | 0.8662 | 0.9086 | 0.9080 | 0.9081 |
66
+ | 0.1333 | 4.8387 | 450 | 0.3397 | 0.8704 | 0.8297 | 0.8709 | 0.8704 | 0.8702 |
67
+ | 0.137 | 5.3763 | 500 | 0.3369 | 0.9028 | 0.8718 | 0.9034 | 0.9028 | 0.9027 |
68
+ | 0.1103 | 5.9140 | 550 | 0.3493 | 0.9025 | 0.8545 | 0.9045 | 0.9025 | 0.9026 |
69
+ | 0.0896 | 6.4516 | 600 | 0.4059 | 0.8813 | 0.8507 | 0.8838 | 0.8813 | 0.8809 |
70
+ | 0.0573 | 6.9892 | 650 | 0.3956 | 0.8813 | 0.8470 | 0.8826 | 0.8813 | 0.8810 |
71
+ | 0.0716 | 7.5269 | 700 | 0.5566 | 0.8815 | 0.8674 | 0.8926 | 0.8815 | 0.8803 |
72
+ | 0.0893 | 8.0645 | 750 | 0.3980 | 0.8920 | 0.8575 | 0.8926 | 0.8920 | 0.8919 |
73
+
74
+
75
+ ### Framework versions
76
+
77
+ - Transformers 4.41.0
78
+ - Pytorch 2.3.0+cu121
79
+ - Datasets 2.19.1
80
+ - Tokenizers 0.19.1
config.json ADDED
@@ -0,0 +1,37 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "_name_or_path": "PlanTL-GOB-ES/bsc-bio-ehr-es",
3
+ "architectures": [
4
+ "RobertaForSequenceClassification"
5
+ ],
6
+ "attention_probs_dropout_prob": 0.1,
7
+ "bos_token_id": 0,
8
+ "classifier_dropout": null,
9
+ "eos_token_id": 2,
10
+ "gradient_checkpointing": false,
11
+ "hidden_act": "gelu",
12
+ "hidden_dropout_prob": 0.1,
13
+ "hidden_size": 768,
14
+ "id2label": {
15
+ "0": "NO_SOSPECHA",
16
+ "1": "SOSPECHA"
17
+ },
18
+ "initializer_range": 0.02,
19
+ "intermediate_size": 3072,
20
+ "label2id": {
21
+ "NO_SOSPECHA": 0,
22
+ "SOSPECHA": 1
23
+ },
24
+ "layer_norm_eps": 1e-05,
25
+ "max_position_embeddings": 514,
26
+ "model_type": "roberta",
27
+ "num_attention_heads": 12,
28
+ "num_hidden_layers": 12,
29
+ "pad_token_id": 1,
30
+ "position_embedding_type": "absolute",
31
+ "problem_type": "single_label_classification",
32
+ "torch_dtype": "float32",
33
+ "transformers_version": "4.41.0",
34
+ "type_vocab_size": 1,
35
+ "use_cache": true,
36
+ "vocab_size": 50262
37
+ }
merges.txt ADDED
The diff for this file is too large to render. See raw diff
 
model.safetensors ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:9926ca19d76d70d457033c55502d913b36666570f9faaf969a6e54cb016e9f22
3
+ size 498603608
runs/May27_07-30-59_e5ff851a56b1/events.out.tfevents.1716795093.e5ff851a56b1.979.0 ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:d23f5bcbe98badfe9f8a59d56732465fcdbbc869de09a297614abb4ca594fa0e
3
+ size 16322
special_tokens_map.json ADDED
@@ -0,0 +1,51 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "bos_token": {
3
+ "content": "<s>",
4
+ "lstrip": false,
5
+ "normalized": true,
6
+ "rstrip": false,
7
+ "single_word": false
8
+ },
9
+ "cls_token": {
10
+ "content": "<s>",
11
+ "lstrip": false,
12
+ "normalized": true,
13
+ "rstrip": false,
14
+ "single_word": false
15
+ },
16
+ "eos_token": {
17
+ "content": "</s>",
18
+ "lstrip": false,
19
+ "normalized": true,
20
+ "rstrip": false,
21
+ "single_word": false
22
+ },
23
+ "mask_token": {
24
+ "content": "<mask>",
25
+ "lstrip": true,
26
+ "normalized": true,
27
+ "rstrip": false,
28
+ "single_word": false
29
+ },
30
+ "pad_token": {
31
+ "content": "<pad>",
32
+ "lstrip": false,
33
+ "normalized": true,
34
+ "rstrip": false,
35
+ "single_word": false
36
+ },
37
+ "sep_token": {
38
+ "content": "</s>",
39
+ "lstrip": false,
40
+ "normalized": true,
41
+ "rstrip": false,
42
+ "single_word": false
43
+ },
44
+ "unk_token": {
45
+ "content": "<unk>",
46
+ "lstrip": false,
47
+ "normalized": true,
48
+ "rstrip": false,
49
+ "single_word": false
50
+ }
51
+ }
tokenizer.json ADDED
The diff for this file is too large to render. See raw diff
 
tokenizer_config.json ADDED
@@ -0,0 +1,58 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "add_prefix_space": true,
3
+ "added_tokens_decoder": {
4
+ "0": {
5
+ "content": "<s>",
6
+ "lstrip": false,
7
+ "normalized": true,
8
+ "rstrip": false,
9
+ "single_word": false,
10
+ "special": true
11
+ },
12
+ "1": {
13
+ "content": "<pad>",
14
+ "lstrip": false,
15
+ "normalized": true,
16
+ "rstrip": false,
17
+ "single_word": false,
18
+ "special": true
19
+ },
20
+ "2": {
21
+ "content": "</s>",
22
+ "lstrip": false,
23
+ "normalized": true,
24
+ "rstrip": false,
25
+ "single_word": false,
26
+ "special": true
27
+ },
28
+ "3": {
29
+ "content": "<unk>",
30
+ "lstrip": false,
31
+ "normalized": true,
32
+ "rstrip": false,
33
+ "single_word": false,
34
+ "special": true
35
+ },
36
+ "50261": {
37
+ "content": "<mask>",
38
+ "lstrip": true,
39
+ "normalized": true,
40
+ "rstrip": false,
41
+ "single_word": false,
42
+ "special": true
43
+ }
44
+ },
45
+ "bos_token": "<s>",
46
+ "clean_up_tokenization_spaces": true,
47
+ "cls_token": "<s>",
48
+ "eos_token": "</s>",
49
+ "errors": "replace",
50
+ "mask_token": "<mask>",
51
+ "max_len": 512,
52
+ "model_max_length": 512,
53
+ "pad_token": "<pad>",
54
+ "sep_token": "</s>",
55
+ "tokenizer_class": "RobertaTokenizer",
56
+ "trim_offsets": true,
57
+ "unk_token": "<unk>"
58
+ }
training_args.bin ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:6cf3dde74bd486074cc558d67a153bcc9410fb75e4de2ebb90ad42b3a86c55d5
3
+ size 5112
vocab.json ADDED
The diff for this file is too large to render. See raw diff