Laksh47 commited on
Commit
debc7fa
1 Parent(s): 5815de0

use relative imports and update changes involving local disk storage

Browse files
README.md CHANGED
@@ -67,15 +67,14 @@ import torch
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  from huggingface_mae import MAEModel
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- huggingface_openphenom_model_dir = "."
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- # huggingface_modelpath = "recursionpharma/OpenPhenom"
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  @pytest.fixture
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  def huggingface_model():
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- # Make sure you have the model/config downloaded from https://huggingface.co/recursionpharma/OpenPhenom to this directory
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- # huggingface-cli download recursionpharma/OpenPhenom --local-dir=.
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- huggingface_model = MAEModel.from_pretrained(huggingface_openphenom_model_dir)
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  huggingface_model.eval()
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  return huggingface_model
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  from huggingface_mae import MAEModel
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+ # huggingface_openphenom_model_dir = "."
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+ huggingface_modelpath = "recursionpharma/OpenPhenom"
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  @pytest.fixture
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  def huggingface_model():
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+ # This step downloads the model to a local cache, takes a bit to run
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+ huggingface_model = MAEModel.from_pretrained(huggingface_modelpath)
 
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  huggingface_model.eval()
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  return huggingface_model
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__init__.py ADDED
File without changes
generate_reconstructions.ipynb CHANGED
The diff for this file is too large to render. See raw diff
 
huggingface_mae.py CHANGED
@@ -4,12 +4,13 @@ import torch
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  import torch.nn as nn
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  from transformers import PretrainedConfig, PreTrainedModel
 
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- from loss import FourierLoss
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- from normalizer import Normalizer
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- from mae_modules import CAMAEDecoder, MAEDecoder, MAEEncoder
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- from mae_utils import flatten_images
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- from vit import (
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  generate_2d_sincos_pos_embeddings,
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  sincos_positional_encoding_vit,
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  vit_small_patch16_256,
@@ -285,8 +286,8 @@ class MAEModel(PreTrainedModel):
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  def from_pretrained(cls, pretrained_model_name_or_path, *model_args, **kwargs):
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  filename = kwargs.pop("filename", "model.safetensors")
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- modelpath = f"{pretrained_model_name_or_path}/{filename}"
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  config = MAEConfig.from_pretrained(pretrained_model_name_or_path, **kwargs)
 
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  state_dict = torch.load(modelpath, map_location="cpu")
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  model = cls(config)
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  model.load_state_dict(state_dict["state_dict"])
 
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  import torch.nn as nn
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  from transformers import PretrainedConfig, PreTrainedModel
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+ from transformers.utils import cached_file
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+ from .loss import FourierLoss
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+ from .normalizer import Normalizer
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+ from .mae_modules import CAMAEDecoder, MAEDecoder, MAEEncoder
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+ from .mae_utils import flatten_images
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+ from .vit import (
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  generate_2d_sincos_pos_embeddings,
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  sincos_positional_encoding_vit,
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  vit_small_patch16_256,
 
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  def from_pretrained(cls, pretrained_model_name_or_path, *model_args, **kwargs):
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  filename = kwargs.pop("filename", "model.safetensors")
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  config = MAEConfig.from_pretrained(pretrained_model_name_or_path, **kwargs)
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+ modelpath = cached_file(pretrained_model_name_or_path, filename=filename)
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  state_dict = torch.load(modelpath, map_location="cpu")
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  model = cls(config)
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  model.load_state_dict(state_dict["state_dict"])
mae_modules.py CHANGED
@@ -7,8 +7,8 @@ import torch.nn as nn
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  from timm.models.helpers import checkpoint_seq
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  from timm.models.vision_transformer import Block, Mlp, VisionTransformer
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- from masking import transformer_random_masking
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- from vit import channel_agnostic_vit
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  # If interested in training new MAEs, combine an encoder and decoder into a new module, and you should
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  # leverage the flattening and unflattening utilities as needed from mae_utils.py.
 
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  from timm.models.helpers import checkpoint_seq
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  from timm.models.vision_transformer import Block, Mlp, VisionTransformer
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+ from .masking import transformer_random_masking
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+ from .vit import channel_agnostic_vit
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  # If interested in training new MAEs, combine an encoder and decoder into a new module, and you should
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  # leverage the flattening and unflattening utilities as needed from mae_utils.py.
test_huggingface_mae.py CHANGED
@@ -1,17 +1,16 @@
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  import pytest
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  import torch
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- from huggingface_mae import MAEModel
 
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- huggingface_openphenom_model_dir = "."
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- # huggingface_modelpath = "recursionpharma/test-pb-model"
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9
 
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  @pytest.fixture
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  def huggingface_model():
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- # Make sure you have the model/config downloaded from https://huggingface.co/recursionpharma/test-pb-model to this directory
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- # huggingface-cli download recursionpharma/test-pb-model --local-dir=.
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- huggingface_model = MAEModel.from_pretrained(huggingface_openphenom_model_dir)
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  huggingface_model.eval()
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  return huggingface_model
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  import pytest
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  import torch
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+ # huggingface_openphenom_model_dir = "."
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+ huggingface_modelpath = "recursionpharma/OpenPhenom"
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+ from .huggingface_mae import MAEModel
 
8
 
9
 
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  @pytest.fixture
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  def huggingface_model():
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+ # This step downloads the model to a local cache, takes a bit to run
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+ huggingface_model = MAEModel.from_pretrained(huggingface_modelpath)
 
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  huggingface_model.eval()
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  return huggingface_model
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