pmaitra's picture
Update spaCy pipeline
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{
"lang":"en",
"name":"biobert_ner_symptom",
"version":"1.0.0",
"description":"BioBERT based NER model for medical symptoms",
"author":"Sena Chae, Pratik Maitra, Padmini Srinivasan",
"email":"sena-chae@uiowa.edu , pmaitra@iastate.edu , padmini-srinivasan@uiowa.edu ",
"url":"",
"license":"MIT",
"spacy_version":">=3.5.1,<3.6.0",
"spacy_git_version":"Unknown",
"vectors":{
"width":0,
"vectors":0,
"keys":0,
"name":null
},
"labels":{
"transformer":[
],
"ner":[
"SYMPTOMS"
]
},
"pipeline":[
"transformer",
"ner"
],
"components":[
"transformer",
"ner"
],
"disabled":[
],
"performance":{
"ents_f":0.9995527061,
"ents_p":0.9997017596,
"ents_r":0.9994036971,
"ents_per_type":{
"SYMPTOMS":{
"p":0.9997017596,
"r":0.9994036971,
"f":0.9995527061
}
},
"transformer_loss":204.5682744511,
"ner_loss":389.2005636985
},
"requirements":[
"spacy-transformers>=1.2.5,<1.3.0"
]
}