remove error dollar symbol in readme
Browse files- README.md +9 -3
- configs/metadata.json +3 -2
- docs/README.md +9 -3
README.md
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@@ -11,9 +11,9 @@ A neural architecture search algorithm for volumetric (3D) segmentation of the p
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![image](https://developer.download.nvidia.com/assets/Clara/Images/clara_pt_net_arch_search_segmentation_workflow_4-1.png)
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## Data
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The training dataset is the
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- Target:
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- Modality: Portal venous phase CT
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- Size: 420 3D volumes (282 Training +139 Testing)
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- Source: Memorial Sloan Kettering Cancer Center
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### Memory Consumption Warning
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If you face memory issues with CacheDataset, you can either switch to a regular Dataset class or lower the caching rate `cache_rate` in the configurations within range
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## Performance
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Dice score is used for evaluating the performance of the model. This model achieves a mean dice score of 0.62.
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python -m monai.bundle run --config_file configs/train.yaml
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```
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#### Override the `train` config to execute multi-GPU training:
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```
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![image](https://developer.download.nvidia.com/assets/Clara/Images/clara_pt_net_arch_search_segmentation_workflow_4-1.png)
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## Data
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The training dataset is the Pancreas Task from the Medical Segmentation Decathalon. Users can find more details on the datasets at http://medicaldecathlon.com/.
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- Target: Pancreas and pancreatic tumor
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- Modality: Portal venous phase CT
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- Size: 420 3D volumes (282 Training +139 Testing)
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- Source: Memorial Sloan Kettering Cancer Center
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### Memory Consumption Warning
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If you face memory issues with CacheDataset, you can either switch to a regular Dataset class or lower the caching rate `cache_rate` in the configurations within range [0, 1] to minimize the System RAM requirements.
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## Performance
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Dice score is used for evaluating the performance of the model. This model achieves a mean dice score of 0.62.
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python -m monai.bundle run --config_file configs/train.yaml
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```
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Please note that if the default dataset path is not modified with the actual path in the bundle config files, you can also override it by using `--dataset_dir`:
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```
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python -m monai.bundle run --config_file configs/train.yaml --dataset_dir <actual dataset path>
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```
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#### Override the `train` config to execute multi-GPU training:
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```
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configs/metadata.json
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@@ -1,7 +1,8 @@
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{
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"schema": "https://github.com/Project-MONAI/MONAI-extra-test-data/releases/download/0.8.1/meta_schema_20220324.json",
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"version": "0.
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"changelog": {
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"0.3.9": "add cpu ram requirement in readme",
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"0.3.8": "add non-deterministic note",
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"0.3.7": "re-train model with updated dints implementation",
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"0.1.0": "complete the model package",
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"0.0.1": "initialize the model package structure"
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},
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"monai_version": "1.2.
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"pytorch_version": "1.13.1",
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"numpy_version": "1.22.2",
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"optional_packages_version": {
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{
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"schema": "https://github.com/Project-MONAI/MONAI-extra-test-data/releases/download/0.8.1/meta_schema_20220324.json",
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"version": "0.4.0",
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"changelog": {
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"0.4.0": "remove error dollar symbol in readme",
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"0.3.9": "add cpu ram requirement in readme",
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"0.3.8": "add non-deterministic note",
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"0.3.7": "re-train model with updated dints implementation",
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"0.1.0": "complete the model package",
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"0.0.1": "initialize the model package structure"
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},
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"monai_version": "1.2.0rc6",
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"pytorch_version": "1.13.1",
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"numpy_version": "1.22.2",
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"optional_packages_version": {
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docs/README.md
CHANGED
@@ -4,9 +4,9 @@ A neural architecture search algorithm for volumetric (3D) segmentation of the p
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![image](https://developer.download.nvidia.com/assets/Clara/Images/clara_pt_net_arch_search_segmentation_workflow_4-1.png)
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## Data
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The training dataset is the
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- Target:
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- Modality: Portal venous phase CT
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- Size: 420 3D volumes (282 Training +139 Testing)
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- Source: Memorial Sloan Kettering Cancer Center
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### Memory Consumption Warning
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-
If you face memory issues with CacheDataset, you can either switch to a regular Dataset class or lower the caching rate `cache_rate` in the configurations within range
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## Performance
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Dice score is used for evaluating the performance of the model. This model achieves a mean dice score of 0.62.
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python -m monai.bundle run --config_file configs/train.yaml
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```
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#### Override the `train` config to execute multi-GPU training:
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```
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![image](https://developer.download.nvidia.com/assets/Clara/Images/clara_pt_net_arch_search_segmentation_workflow_4-1.png)
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## Data
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The training dataset is the Pancreas Task from the Medical Segmentation Decathalon. Users can find more details on the datasets at http://medicaldecathlon.com/.
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- Target: Pancreas and pancreatic tumor
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- Modality: Portal venous phase CT
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- Size: 420 3D volumes (282 Training +139 Testing)
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- Source: Memorial Sloan Kettering Cancer Center
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### Memory Consumption Warning
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+
If you face memory issues with CacheDataset, you can either switch to a regular Dataset class or lower the caching rate `cache_rate` in the configurations within range [0, 1] to minimize the System RAM requirements.
|
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|
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## Performance
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Dice score is used for evaluating the performance of the model. This model achieves a mean dice score of 0.62.
|
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python -m monai.bundle run --config_file configs/train.yaml
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```
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|
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+
Please note that if the default dataset path is not modified with the actual path in the bundle config files, you can also override it by using `--dataset_dir`:
|
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+
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```
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+
python -m monai.bundle run --config_file configs/train.yaml --dataset_dir <actual dataset path>
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```
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+
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#### Override the `train` config to execute multi-GPU training:
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```
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