qual initial commit

config.json

@@ -0,0 +1,42 @@
+{
+  "_name_or_path": "emilyalsentzer/Bio_ClinicalBERT",
+  "architectures": [
+    "BertForSequenceClassification"
+  ],
+  "attention_probs_dropout_prob": 0.1,
+  "classifier_dropout": null,
+  "hidden_act": "gelu",
+  "hidden_dropout_prob": 0.1,
+  "hidden_size": 768,
+  "id2label": {
+    "0": "LABEL_0",
+    "1": "LABEL_1",
+    "2": "LABEL_2",
+    "3": "LABEL_3",
+    "4": "LABEL_4",
+    "5": "LABEL_5"
+  },
+  "initializer_range": 0.02,
+  "intermediate_size": 3072,
+  "label2id": {
+    "LABEL_0": 0,
+    "LABEL_1": 1,
+    "LABEL_2": 2,
+    "LABEL_3": 3,
+    "LABEL_4": 4,
+    "LABEL_5": 5
+  },
+  "layer_norm_eps": 1e-12,
+  "max_position_embeddings": 512,
+  "model_type": "bert",
+  "num_attention_heads": 12,
+  "num_hidden_layers": 12,
+  "pad_token_id": 0,
+  "position_embedding_type": "absolute",
+  "problem_type": "single_label_classification",
+  "torch_dtype": "float32",
+  "transformers_version": "4.21.2",
+  "type_vocab_size": 2,
+  "use_cache": true,
+  "vocab_size": 28996
+}

model_args.json

@@ -0,0 +1 @@
+{"adafactor_beta1": null, "adafactor_clip_threshold": 1.0, "adafactor_decay_rate": -0.8, "adafactor_eps": [1e-30, 0.001], "adafactor_relative_step": true, "adafactor_scale_parameter": true, "adafactor_warmup_init": true, "adam_epsilon": 1e-08, "best_model_dir": "outputs/best_model", "cache_dir": "cache_dir/", "config": {}, "cosine_schedule_num_cycles": 0.5, "custom_layer_parameters": [], "custom_parameter_groups": [], "dataloader_num_workers": 0, "do_lower_case": false, "dynamic_quantize": false, "early_stopping_consider_epochs": false, "early_stopping_delta": 0, "early_stopping_metric": "eval_loss", "early_stopping_metric_minimize": true, "early_stopping_patience": 3, "encoding": null, "eval_batch_size": 8, "evaluate_during_training": false, "evaluate_during_training_silent": true, "evaluate_during_training_steps": 2000, "evaluate_during_training_verbose": false, "evaluate_each_epoch": true, "fp16": true, "gradient_accumulation_steps": 1, "learning_rate": 8.188840295615237e-05, "local_rank": -1, "logging_steps": 50, "loss_type": null, "loss_args": {}, "manual_seed": 43, "max_grad_norm": 1.0, "max_seq_length": 256, "model_name": "emilyalsentzer/Bio_ClinicalBERT", "model_type": "bert", "multiprocessing_chunksize": -1, "n_gpu": 1, "no_cache": false, "no_save": false, "not_saved_args": [], "num_train_epochs": 1, "optimizer": "AdamW", "output_dir": "tf_outputs", "overwrite_output_dir": true, "polynomial_decay_schedule_lr_end": 1e-07, "polynomial_decay_schedule_power": 1.0, "process_count": 14, "quantized_model": false, "reprocess_input_data": true, "save_best_model": true, "save_eval_checkpoints": false, "save_model_every_epoch": false, "save_optimizer_and_scheduler": true, "save_steps": -1, "scheduler": "linear_schedule_with_warmup", "silent": false, "skip_special_tokens": true, "tensorboard_dir": null, "thread_count": null, "tokenizer_name": "emilyalsentzer/Bio_ClinicalBERT", "tokenizer_type": null, "train_batch_size": 8, "train_custom_parameters_only": false, "use_cached_eval_features": false, "use_early_stopping": false, "use_hf_datasets": false, "use_multiprocessing": false, "use_multiprocessing_for_evaluation": false, "wandb_kwargs": {}, "wandb_project": null, "warmup_ratio": 0.06, "warmup_steps": 39, "weight_decay": 0.0, "model_class": "ClassificationModel", "labels_list": [0, 1, 2, 3, 4, 5], "labels_map": {}, "lazy_delimiter": "\t", "lazy_labels_column": 1, "lazy_loading": false, "lazy_loading_start_line": 1, "lazy_text_a_column": null, "lazy_text_b_column": null, "lazy_text_column": 0, "onnx": false, "regression": false, "sliding_window": false, "special_tokens_list": [], "stride": 0.8, "tie_value": 1}

pytorch_model.bin

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special_tokens_map.json

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+{
+  "cls_token": "[CLS]",
+  "mask_token": "[MASK]",
+  "pad_token": "[PAD]",
+  "sep_token": "[SEP]",
+  "unk_token": "[UNK]"
+}

tokenizer_config.json

@@ -0,0 +1,15 @@
+{
+  "cls_token": "[CLS]",
+  "do_basic_tokenize": true,
+  "do_lower_case": false,
+  "mask_token": "[MASK]",
+  "name_or_path": "emilyalsentzer/Bio_ClinicalBERT",
+  "never_split": null,
+  "pad_token": "[PAD]",
+  "sep_token": "[SEP]",
+  "special_tokens_map_file": null,
+  "strip_accents": null,
+  "tokenize_chinese_chars": true,
+  "tokenizer_class": "BertTokenizer",
+  "unk_token": "[UNK]"
+}

training_args.bin

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