name improved_genie2 | |
seed 100 | |
numPairTransformLayers 8 | |
warmupEpoches 2 | |
numEpoches 20 | |
motifProbability 1.0 | |
logEverySteps 1000 | |
checkpointEveryEpoches 1 | |
batchSize 1 | |
accum_grad 4 | |
learningRate 1e-5 | |
ambient False | |
dataDirectory /scratch/projects/cgai/ambient_proteins/cluster/datasets/1300K/plddt70/afdb/repr/cluster_alntype1_tm50_alncov75_021425_021425_cluster | |
minimumNumResidues 20 | |
maximumNumResidues 768 | |
min_plddt 70 | |
resume runs/baseline_pair8_cluster_repr_tm50_plddt70_L512/version_0/checkpoints/epoch=49.ckpt | |