| | """Provides explicit constructions of expander graphs.""" |
| |
|
| | import itertools |
| |
|
| | import networkx as nx |
| |
|
| | __all__ = [ |
| | "margulis_gabber_galil_graph", |
| | "chordal_cycle_graph", |
| | "paley_graph", |
| | "maybe_regular_expander", |
| | "maybe_regular_expander_graph", |
| | "is_regular_expander", |
| | "random_regular_expander_graph", |
| | ] |
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| | |
| | @nx._dispatchable(graphs=None, returns_graph=True) |
| | def margulis_gabber_galil_graph(n, create_using=None): |
| | r"""Returns the Margulis-Gabber-Galil undirected MultiGraph on `n^2` nodes. |
| | |
| | The undirected MultiGraph is regular with degree `8`. Nodes are integer |
| | pairs. The second-largest eigenvalue of the adjacency matrix of the graph |
| | is at most `5 \sqrt{2}`, regardless of `n`. |
| | |
| | Parameters |
| | ---------- |
| | n : int |
| | Determines the number of nodes in the graph: `n^2`. |
| | create_using : NetworkX graph constructor, optional (default MultiGraph) |
| | Graph type to create. If graph instance, then cleared before populated. |
| | |
| | Returns |
| | ------- |
| | G : graph |
| | The constructed undirected multigraph. |
| | |
| | Raises |
| | ------ |
| | NetworkXError |
| | If the graph is directed or not a multigraph. |
| | |
| | """ |
| | G = nx.empty_graph(0, create_using, default=nx.MultiGraph) |
| | if G.is_directed() or not G.is_multigraph(): |
| | msg = "`create_using` must be an undirected multigraph." |
| | raise nx.NetworkXError(msg) |
| |
|
| | for x, y in itertools.product(range(n), repeat=2): |
| | for u, v in ( |
| | ((x + 2 * y) % n, y), |
| | ((x + (2 * y + 1)) % n, y), |
| | (x, (y + 2 * x) % n), |
| | (x, (y + (2 * x + 1)) % n), |
| | ): |
| | G.add_edge((x, y), (u, v)) |
| | G.graph["name"] = f"margulis_gabber_galil_graph({n})" |
| | return G |
| |
|
| |
|
| | @nx._dispatchable(graphs=None, returns_graph=True) |
| | def chordal_cycle_graph(p, create_using=None): |
| | """Returns the chordal cycle graph on `p` nodes. |
| | |
| | The returned graph is a cycle graph on `p` nodes with chords joining each |
| | vertex `x` to its inverse modulo `p`. This graph is a (mildly explicit) |
| | 3-regular expander [1]_. |
| | |
| | `p` *must* be a prime number. |
| | |
| | Parameters |
| | ---------- |
| | p : a prime number |
| | |
| | The number of vertices in the graph. This also indicates where the |
| | chordal edges in the cycle will be created. |
| | |
| | create_using : NetworkX graph constructor, optional (default=nx.Graph) |
| | Graph type to create. If graph instance, then cleared before populated. |
| | |
| | Returns |
| | ------- |
| | G : graph |
| | The constructed undirected multigraph. |
| | |
| | Raises |
| | ------ |
| | NetworkXError |
| | |
| | If `create_using` indicates directed or not a multigraph. |
| | |
| | References |
| | ---------- |
| | |
| | .. [1] Theorem 4.4.2 in A. Lubotzky. "Discrete groups, expanding graphs and |
| | invariant measures", volume 125 of Progress in Mathematics. |
| | Birkhäuser Verlag, Basel, 1994. |
| | |
| | """ |
| | G = nx.empty_graph(0, create_using, default=nx.MultiGraph) |
| | if G.is_directed() or not G.is_multigraph(): |
| | msg = "`create_using` must be an undirected multigraph." |
| | raise nx.NetworkXError(msg) |
| |
|
| | for x in range(p): |
| | left = (x - 1) % p |
| | right = (x + 1) % p |
| | |
| | |
| | |
| | |
| | |
| | |
| | |
| | |
| | |
| | |
| | chord = pow(x, p - 2, p) if x > 0 else 0 |
| | for y in (left, right, chord): |
| | G.add_edge(x, y) |
| | G.graph["name"] = f"chordal_cycle_graph({p})" |
| | return G |
| |
|
| |
|
| | @nx._dispatchable(graphs=None, returns_graph=True) |
| | def paley_graph(p, create_using=None): |
| | r"""Returns the Paley $\frac{(p-1)}{2}$ -regular graph on $p$ nodes. |
| | |
| | The returned graph is a graph on $\mathbb{Z}/p\mathbb{Z}$ with edges between $x$ and $y$ |
| | if and only if $x-y$ is a nonzero square in $\mathbb{Z}/p\mathbb{Z}$. |
| | |
| | If $p \equiv 1 \pmod 4$, $-1$ is a square in |
| | $\mathbb{Z}/p\mathbb{Z}$ and therefore $x-y$ is a square if and |
| | only if $y-x$ is also a square, i.e the edges in the Paley graph are symmetric. |
| | |
| | If $p \equiv 3 \pmod 4$, $-1$ is not a square in $\mathbb{Z}/p\mathbb{Z}$ |
| | and therefore either $x-y$ or $y-x$ is a square in $\mathbb{Z}/p\mathbb{Z}$ but not both. |
| | |
| | Note that a more general definition of Paley graphs extends this construction |
| | to graphs over $q=p^n$ vertices, by using the finite field $F_q$ instead of |
| | $\mathbb{Z}/p\mathbb{Z}$. |
| | This construction requires to compute squares in general finite fields and is |
| | not what is implemented here (i.e `paley_graph(25)` does not return the true |
| | Paley graph associated with $5^2$). |
| | |
| | Parameters |
| | ---------- |
| | p : int, an odd prime number. |
| | |
| | create_using : NetworkX graph constructor, optional (default=nx.Graph) |
| | Graph type to create. If graph instance, then cleared before populated. |
| | |
| | Returns |
| | ------- |
| | G : graph |
| | The constructed directed graph. |
| | |
| | Raises |
| | ------ |
| | NetworkXError |
| | If the graph is a multigraph. |
| | |
| | References |
| | ---------- |
| | Chapter 13 in B. Bollobas, Random Graphs. Second edition. |
| | Cambridge Studies in Advanced Mathematics, 73. |
| | Cambridge University Press, Cambridge (2001). |
| | """ |
| | G = nx.empty_graph(0, create_using, default=nx.DiGraph) |
| | if G.is_multigraph(): |
| | msg = "`create_using` cannot be a multigraph." |
| | raise nx.NetworkXError(msg) |
| |
|
| | |
| | |
| | |
| | square_set = {(x**2) % p for x in range(1, p) if (x**2) % p != 0} |
| |
|
| | for x in range(p): |
| | for x2 in square_set: |
| | G.add_edge(x, (x + x2) % p) |
| | G.graph["name"] = f"paley({p})" |
| | return G |
| |
|
| |
|
| | @nx.utils.decorators.np_random_state("seed") |
| | @nx._dispatchable(graphs=None, returns_graph=True) |
| | def maybe_regular_expander_graph(n, d, *, create_using=None, max_tries=100, seed=None): |
| | r"""Utility for creating a random regular expander. |
| | |
| | Returns a random $d$-regular graph on $n$ nodes which is an expander |
| | graph with very good probability. |
| | |
| | Parameters |
| | ---------- |
| | n : int |
| | The number of nodes. |
| | d : int |
| | The degree of each node. |
| | create_using : Graph Instance or Constructor |
| | Indicator of type of graph to return. |
| | If a Graph-type instance, then clear and use it. |
| | If a constructor, call it to create an empty graph. |
| | Use the Graph constructor by default. |
| | max_tries : int. (default: 100) |
| | The number of allowed loops when generating each independent cycle |
| | seed : (default: None) |
| | Seed used to set random number generation state. See :ref`Randomness<randomness>`. |
| | |
| | Notes |
| | ----- |
| | The nodes are numbered from $0$ to $n - 1$. |
| | |
| | The graph is generated by taking $d / 2$ random independent cycles. |
| | |
| | Joel Friedman proved that in this model the resulting |
| | graph is an expander with probability |
| | $1 - O(n^{-\tau})$ where $\tau = \lceil (\sqrt{d - 1}) / 2 \rceil - 1$. [1]_ |
| | |
| | Examples |
| | -------- |
| | >>> G = nx.maybe_regular_expander_graph(n=200, d=6, seed=8020) |
| | |
| | Returns |
| | ------- |
| | G : graph |
| | The constructed undirected graph. |
| | |
| | Raises |
| | ------ |
| | NetworkXError |
| | If $d % 2 != 0$ as the degree must be even. |
| | If $n - 1$ is less than $ 2d $ as the graph is complete at most. |
| | If max_tries is reached |
| | |
| | See Also |
| | -------- |
| | is_regular_expander |
| | random_regular_expander_graph |
| | |
| | References |
| | ---------- |
| | .. [1] Joel Friedman, |
| | A Proof of Alon's Second Eigenvalue Conjecture and Related Problems, 2004 |
| | https://arxiv.org/abs/cs/0405020 |
| | |
| | """ |
| |
|
| | import numpy as np |
| |
|
| | if n < 1: |
| | raise nx.NetworkXError("n must be a positive integer") |
| |
|
| | if not (d >= 2): |
| | raise nx.NetworkXError("d must be greater than or equal to 2") |
| |
|
| | if not (d % 2 == 0): |
| | raise nx.NetworkXError("d must be even") |
| |
|
| | if not (n - 1 >= d): |
| | raise nx.NetworkXError( |
| | f"Need n-1>= d to have room for {d // 2} independent cycles with {n} nodes" |
| | ) |
| |
|
| | G = nx.empty_graph(n, create_using) |
| |
|
| | if n < 2: |
| | return G |
| |
|
| | cycles = [] |
| | edges = set() |
| |
|
| | |
| | for i in range(d // 2): |
| | iterations = max_tries |
| | |
| | while len(edges) != (i + 1) * n: |
| | iterations -= 1 |
| | |
| | |
| | cycle = seed.permutation(n - 1).tolist() |
| | cycle.append(n - 1) |
| |
|
| | new_edges = { |
| | (u, v) |
| | for u, v in nx.utils.pairwise(cycle, cyclic=True) |
| | if (u, v) not in edges and (v, u) not in edges |
| | } |
| | |
| | |
| | if len(new_edges) == n: |
| | cycles.append(cycle) |
| | edges.update(new_edges) |
| |
|
| | if iterations == 0: |
| | msg = "Too many iterations in maybe_regular_expander_graph" |
| | raise nx.NetworkXError(msg) |
| |
|
| | G.add_edges_from(edges) |
| |
|
| | return G |
| |
|
| |
|
| | def maybe_regular_expander(n, d, *, create_using=None, max_tries=100, seed=None): |
| | """ |
| | .. deprecated:: 3.6 |
| | `maybe_regular_expander` is a deprecated alias |
| | for `maybe_regular_expander_graph`. |
| | Use `maybe_regular_expander_graph` instead. |
| | """ |
| | import warnings |
| |
|
| | warnings.warn( |
| | "maybe_regular_expander is deprecated, " |
| | "use `maybe_regular_expander_graph` instead.", |
| | category=DeprecationWarning, |
| | stacklevel=2, |
| | ) |
| | return maybe_regular_expander_graph( |
| | n, d, create_using=create_using, max_tries=max_tries, seed=seed |
| | ) |
| |
|
| |
|
| | @nx.utils.not_implemented_for("directed") |
| | @nx.utils.not_implemented_for("multigraph") |
| | @nx._dispatchable(preserve_edge_attrs={"G": {"weight": 1}}) |
| | def is_regular_expander(G, *, epsilon=0): |
| | r"""Determines whether the graph G is a regular expander. [1]_ |
| | |
| | An expander graph is a sparse graph with strong connectivity properties. |
| | |
| | More precisely, this helper checks whether the graph is a |
| | regular $(n, d, \lambda)$-expander with $\lambda$ close to |
| | the Alon-Boppana bound and given by |
| | $\lambda = 2 \sqrt{d - 1} + \epsilon$. [2]_ |
| | |
| | In the case where $\epsilon = 0$ then if the graph successfully passes the test |
| | it is a Ramanujan graph. [3]_ |
| | |
| | A Ramanujan graph has spectral gap almost as large as possible, which makes them |
| | excellent expanders. |
| | |
| | Parameters |
| | ---------- |
| | G : NetworkX graph |
| | epsilon : int, float, default=0 |
| | |
| | Returns |
| | ------- |
| | bool |
| | Whether the given graph is a regular $(n, d, \lambda)$-expander |
| | where $\lambda = 2 \sqrt{d - 1} + \epsilon$. |
| | |
| | Examples |
| | -------- |
| | >>> G = nx.random_regular_expander_graph(20, 4) |
| | >>> nx.is_regular_expander(G) |
| | True |
| | |
| | See Also |
| | -------- |
| | maybe_regular_expander_graph |
| | random_regular_expander_graph |
| | |
| | References |
| | ---------- |
| | .. [1] Expander graph, https://en.wikipedia.org/wiki/Expander_graph |
| | .. [2] Alon-Boppana bound, https://en.wikipedia.org/wiki/Alon%E2%80%93Boppana_bound |
| | .. [3] Ramanujan graphs, https://en.wikipedia.org/wiki/Ramanujan_graph |
| | |
| | """ |
| |
|
| | import numpy as np |
| | import scipy as sp |
| |
|
| | if epsilon < 0: |
| | raise nx.NetworkXError("epsilon must be non negative") |
| |
|
| | if not nx.is_regular(G): |
| | return False |
| |
|
| | _, d = nx.utils.arbitrary_element(G.degree) |
| |
|
| | A = nx.adjacency_matrix(G, dtype=float) |
| | lams = sp.sparse.linalg.eigsh(A, which="LM", k=2, return_eigenvectors=False) |
| |
|
| | |
| | lambda2 = min(lams) |
| |
|
| | |
| | return bool(abs(lambda2) < 2 * np.sqrt(d - 1) + epsilon) |
| |
|
| |
|
| | @nx.utils.decorators.np_random_state("seed") |
| | @nx._dispatchable(graphs=None, returns_graph=True) |
| | def random_regular_expander_graph( |
| | n, d, *, epsilon=0, create_using=None, max_tries=100, seed=None |
| | ): |
| | r"""Returns a random regular expander graph on $n$ nodes with degree $d$. |
| | |
| | An expander graph is a sparse graph with strong connectivity properties. [1]_ |
| | |
| | More precisely the returned graph is a $(n, d, \lambda)$-expander with |
| | $\lambda = 2 \sqrt{d - 1} + \epsilon$, close to the Alon-Boppana bound. [2]_ |
| | |
| | In the case where $\epsilon = 0$ it returns a Ramanujan graph. |
| | A Ramanujan graph has spectral gap almost as large as possible, |
| | which makes them excellent expanders. [3]_ |
| | |
| | Parameters |
| | ---------- |
| | n : int |
| | The number of nodes. |
| | d : int |
| | The degree of each node. |
| | epsilon : int, float, default=0 |
| | max_tries : int, (default: 100) |
| | The number of allowed loops, |
| | also used in the `maybe_regular_expander_graph` utility |
| | seed : (default: None) |
| | Seed used to set random number generation state. See :ref`Randomness<randomness>`. |
| | |
| | Raises |
| | ------ |
| | NetworkXError |
| | If max_tries is reached |
| | |
| | Examples |
| | -------- |
| | >>> G = nx.random_regular_expander_graph(20, 4) |
| | >>> nx.is_regular_expander(G) |
| | True |
| | |
| | Notes |
| | ----- |
| | This loops over `maybe_regular_expander_graph` and can be slow when |
| | $n$ is too big or $\epsilon$ too small. |
| | |
| | See Also |
| | -------- |
| | maybe_regular_expander_graph |
| | is_regular_expander |
| | |
| | References |
| | ---------- |
| | .. [1] Expander graph, https://en.wikipedia.org/wiki/Expander_graph |
| | .. [2] Alon-Boppana bound, https://en.wikipedia.org/wiki/Alon%E2%80%93Boppana_bound |
| | .. [3] Ramanujan graphs, https://en.wikipedia.org/wiki/Ramanujan_graph |
| | |
| | """ |
| | G = maybe_regular_expander_graph( |
| | n, d, create_using=create_using, max_tries=max_tries, seed=seed |
| | ) |
| | iterations = max_tries |
| |
|
| | while not is_regular_expander(G, epsilon=epsilon): |
| | iterations -= 1 |
| | G = maybe_regular_expander_graph( |
| | n=n, d=d, create_using=create_using, max_tries=max_tries, seed=seed |
| | ) |
| |
|
| | if iterations == 0: |
| | raise nx.NetworkXError( |
| | "Too many iterations in random_regular_expander_graph" |
| | ) |
| |
|
| | return G |
| |
|