Commit
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3a6d7cc
1
Parent(s):
20dfe00
Training in progress, step 500
Browse files- .gitignore +1 -0
- config.json +44 -0
- pytorch_model.bin +3 -0
- runs/Jun13_19-15-43_cascade-019.cluster/1655140606.2643852/events.out.tfevents.1655140606.cascade-019.cluster.24284.1 +3 -0
- runs/Jun13_19-15-43_cascade-019.cluster/events.out.tfevents.1655140598.cascade-019.cluster.24284.0 +3 -0
- special_tokens_map.json +1 -0
- tokenizer.json +0 -0
- tokenizer_config.json +1 -0
- training_args.bin +3 -0
- vocab.txt +0 -0
.gitignore
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checkpoint-*/
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config.json
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{
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"_name_or_path": "dmis-lab/biobert-v1.1",
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"adapters": {
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"adapters": {},
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"config_map": {},
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"fusion_config_map": {},
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"fusions": {}
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},
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"architectures": [
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"BertForTokenClassification"
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],
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"attention_probs_dropout_prob": 0.1,
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"classifier_dropout": null,
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"gradient_checkpointing": false,
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"hidden_act": "gelu",
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"hidden_dropout_prob": 0.1,
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"hidden_size": 768,
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"id2label": {
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"0": "O",
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"1": "B-CHEBI",
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"2": "I-CHEBI"
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},
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"initializer_range": 0.02,
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"intermediate_size": 3072,
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"label2id": {
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"B-CHEBI": "1",
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"I-CHEBI": "2",
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"O": "0"
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},
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"layer_norm_eps": 1e-12,
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"max_length": 384,
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"max_position_embeddings": 512,
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"model_type": "bert",
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"num_attention_heads": 12,
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"num_hidden_layers": 12,
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"pad_token_id": 0,
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"position_embedding_type": "absolute",
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"problem_type": "multi_label_classification",
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"torch_dtype": "float32",
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"transformers_version": "4.11.3",
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"type_vocab_size": 2,
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"use_cache": true,
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"vocab_size": 28996
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}
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pytorch_model.bin
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version https://git-lfs.github.com/spec/v1
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oid sha256:e9e0dfedc15b483b06522adaa2b843449717991a0ca1689bba8239addf928f3e
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size 430974833
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runs/Jun13_19-15-43_cascade-019.cluster/1655140606.2643852/events.out.tfevents.1655140606.cascade-019.cluster.24284.1
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version https://git-lfs.github.com/spec/v1
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oid sha256:0be58d3fe901f81ef0f10c52eb9784b8f39238f7748d103c63504b5551c01cc2
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size 4553
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runs/Jun13_19-15-43_cascade-019.cluster/events.out.tfevents.1655140598.cascade-019.cluster.24284.0
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version https://git-lfs.github.com/spec/v1
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oid sha256:b87d8ccc7708ef162faff163c72ccb07da6e4802592114ac619c8871ef9828ca
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size 4071
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special_tokens_map.json
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{"unk_token": "[UNK]", "sep_token": "[SEP]", "pad_token": "[PAD]", "cls_token": "[CLS]", "mask_token": "[MASK]"}
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tokenizer.json
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tokenizer_config.json
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{"do_lower_case": false, "unk_token": "[UNK]", "sep_token": "[SEP]", "pad_token": "[PAD]", "cls_token": "[CLS]", "mask_token": "[MASK]", "tokenize_chinese_chars": true, "strip_accents": null, "model_max_length": 384, "problem_type": "multi_label_classification", "max_length": 384, "special_tokens_map_file": "/home/mobashgr/.cache/huggingface/transformers/118da8438a7854000cfcf052566f83ae4f4159ac25796e49e16c3b18746041b4.dd8bd9bfd3664b530ea4e645105f557769387b3da9f79bdb55ed556bdd80611d", "name_or_path": "dmis-lab/biobert-v1.1", "do_basic_tokenize": true, "never_split": null, "tokenizer_class": "BertTokenizer"}
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training_args.bin
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version https://git-lfs.github.com/spec/v1
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oid sha256:22f52eca9261cbbc968f42c2007900bb74834bde0d3f6b490e45e6990cf40a60
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size 2863
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vocab.txt
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