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Push model using huggingface_hub.

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Files changed (3) hide show
  1. README.md +12 -0
  2. config.json +77 -0
  3. model.safetensors +3 -0
README.md ADDED
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+ ---
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+ tags:
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+ - biology
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+ - genbio
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+ - model_hub_mixin
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+ - protein
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+ - pytorch_model_hub_mixin
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+ ---
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+
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+ This model has been pushed to the Hub using the [PytorchModelHubMixin](https://huggingface.co/docs/huggingface_hub/package_reference/mixins#huggingface_hub.PyTorchModelHubMixin) integration:
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+ - Library: [More Information Needed]
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+ - Docs: [More Information Needed]
config.json ADDED
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+ {
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+ "decoder_config": {
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+ "folding_trunk": {
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+ "chunk_size": null,
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+ "cpu_grad_checkpoint": false,
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+ "dropout": 0.1,
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+ "layer_drop": 0,
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+ "max_recycles": 4,
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+ "num_blocks": 32,
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+ "pairwise_head_width": 32,
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+ "pairwise_state_dim": 128,
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+ "position_bins": 32,
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+ "sequence_head_width": 32,
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+ "sequence_state_dim": 768,
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+ "structure_module": {
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+ "c_ipa": 16,
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+ "c_resnet": 128,
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+ "c_s": 384,
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+ "c_z": 128,
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+ "dropout_rate": 0.1,
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+ "epsilon": 1e-08,
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+ "inf": 100000.0,
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+ "no_angles": 7,
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+ "no_blocks": 8,
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+ "no_heads_ipa": 12,
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+ "no_qk_points": 4,
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+ "no_resnet_blocks": 2,
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+ "no_transition_layers": 1,
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+ "no_v_points": 8,
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+ "trans_scale_factor": 10
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+ }
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+ },
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+ "lddt_head_hidden_dim": 128,
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+ "quantize_dim": 384
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+ },
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+ "encoder_config": {
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+ "edge_emb": {
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+ "bessels": {
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+ "bessel_const": 40.0,
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+ "d": 128
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+ },
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+ "d": 128,
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+ "edge_type_emb": {
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+ "d": 128,
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+ "dropout": 0.1,
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+ "max_res_offset": 32,
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+ "max_sym_offset": 2
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+ },
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+ "k_for_knn": 30
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+ },
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+ "eqnet": {
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+ "attn_dropout": 0,
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+ "d": 128,
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+ "d_mult": 3,
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+ "dropout": 0.1,
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+ "n_head": 4
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+ },
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+ "n_eqnet": 12,
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+ "node_emb": {
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+ "d": 128,
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+ "dropout": 0.1,
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+ "mask_node_type": true,
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+ "n_chain_type": 100,
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+ "n_node_type": 200
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+ },
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+ "quantize": {
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+ "decay": 0.99,
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+ "dim": 384,
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+ "eps": 1e-05,
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+ "n_embed": 512,
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+ "normalize": true,
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+ "restart": 100,
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+ "usage_threshold": 1e-09
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+ }
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+ },
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+ "frozen_codebook": false
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+ }
model.safetensors ADDED
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+ version https://git-lfs.github.com/spec/v1
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+ oid sha256:8aaaf36ca02e03c82d81578aec6aac38d56ed6c99628fb4163a2cf8a748cb13a
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+ size 1099630676