Caleb Ellington
commited on
Commit
•
7fde78d
1
Parent(s):
8924861
Update paths
Browse files- README.md +1 -1
- fold0/config.yaml +2 -2
- fold1/config.yaml +2 -2
- fold2/config.yaml +2 -2
- fold3/config.yaml +2 -2
- fold4/config.yaml +2 -2
README.md
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@@ -4,7 +4,7 @@
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from huggingface_hub import snapshot_download
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from pathlib import Path
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-
model_name = "genbio-ai/
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genbio_models_path = Path.home().joinpath('genbio_models', model_name)
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genbio_models_path.mkdir(parents=True, exist_ok=True)
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snapshot_download(repo_id=model_name, local_dir=genbio_models_path)
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from huggingface_hub import snapshot_download
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from pathlib import Path
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+
model_name = "genbio-ai/AIDO.Protein-16B-dms-indels-BLAT_ECOLX_Gonzalez_2019_indels"
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genbio_models_path = Path.home().joinpath('genbio_models', model_name)
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genbio_models_path.mkdir(parents=True, exist_ok=True)
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snapshot_download(repo_id=model_name, local_dir=genbio_models_path)
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fold0/config.yaml
CHANGED
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@@ -42,7 +42,7 @@ trainer:
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dir: null
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id: null
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anonymous: null
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project:
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log_model: false
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experiment: null
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prefix: ''
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@@ -143,7 +143,7 @@ model:
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class_path: modelgenerator.tasks.SequenceRegression
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init_args:
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backbone:
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class_path: modelgenerator.backbones.
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init_args:
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from_scratch: false
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use_peft: true
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dir: null
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id: null
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anonymous: null
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project: MGEN_AIDO.Protein-16B_DMS
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log_model: false
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experiment: null
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prefix: ''
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class_path: modelgenerator.tasks.SequenceRegression
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init_args:
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backbone:
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class_path: modelgenerator.backbones.aido_protein_16b
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init_args:
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from_scratch: false
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use_peft: true
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fold1/config.yaml
CHANGED
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@@ -42,7 +42,7 @@ trainer:
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dir: null
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id: null
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anonymous: null
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-
project:
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log_model: false
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experiment: null
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prefix: ''
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@@ -143,7 +143,7 @@ model:
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class_path: modelgenerator.tasks.SequenceRegression
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init_args:
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backbone:
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-
class_path: modelgenerator.backbones.
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init_args:
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from_scratch: false
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use_peft: true
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dir: null
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id: null
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anonymous: null
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project: MGEN_AIDO.Protein-16B_DMS
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log_model: false
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experiment: null
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prefix: ''
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class_path: modelgenerator.tasks.SequenceRegression
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init_args:
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backbone:
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class_path: modelgenerator.backbones.aido_protein_16b
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init_args:
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from_scratch: false
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use_peft: true
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fold2/config.yaml
CHANGED
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@@ -42,7 +42,7 @@ trainer:
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dir: null
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id: null
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anonymous: null
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-
project:
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log_model: false
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experiment: null
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prefix: ''
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@@ -143,7 +143,7 @@ model:
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class_path: modelgenerator.tasks.SequenceRegression
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init_args:
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backbone:
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-
class_path: modelgenerator.backbones.
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init_args:
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from_scratch: false
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use_peft: true
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dir: null
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id: null
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anonymous: null
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+
project: MGEN_AIDO.Protein-16B_DMS
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log_model: false
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experiment: null
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prefix: ''
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class_path: modelgenerator.tasks.SequenceRegression
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init_args:
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backbone:
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+
class_path: modelgenerator.backbones.aido_protein_16b
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init_args:
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from_scratch: false
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use_peft: true
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fold3/config.yaml
CHANGED
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@@ -42,7 +42,7 @@ trainer:
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dir: null
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id: null
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anonymous: null
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-
project:
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log_model: false
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experiment: null
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prefix: ''
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@@ -143,7 +143,7 @@ model:
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class_path: modelgenerator.tasks.SequenceRegression
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init_args:
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backbone:
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-
class_path: modelgenerator.backbones.
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init_args:
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from_scratch: false
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use_peft: true
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dir: null
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id: null
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anonymous: null
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+
project: MGEN_AIDO.Protein-16B_DMS
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log_model: false
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experiment: null
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prefix: ''
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class_path: modelgenerator.tasks.SequenceRegression
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init_args:
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backbone:
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+
class_path: modelgenerator.backbones.aido_protein_16b
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init_args:
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from_scratch: false
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use_peft: true
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fold4/config.yaml
CHANGED
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@@ -42,7 +42,7 @@ trainer:
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dir: null
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id: null
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anonymous: null
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-
project:
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log_model: false
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experiment: null
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prefix: ''
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@@ -143,7 +143,7 @@ model:
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class_path: modelgenerator.tasks.SequenceRegression
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init_args:
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backbone:
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-
class_path: modelgenerator.backbones.
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init_args:
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from_scratch: false
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use_peft: true
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dir: null
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id: null
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anonymous: null
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+
project: MGEN_AIDO.Protein-16B_DMS
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log_model: false
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experiment: null
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prefix: ''
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class_path: modelgenerator.tasks.SequenceRegression
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init_args:
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backbone:
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+
class_path: modelgenerator.backbones.aido_protein_16b
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init_args:
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from_scratch: false
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use_peft: true
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