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sync: runs/exp_t2_pair_aux_tier_aware_supcon_20260425_192434_prod/metrics.json

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runs/exp_t2_pair_aux_tier_aware_supcon_20260425_192434_prod/metrics.json ADDED
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+ {
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+ "name": "asym-ntv3-650m+ntv3-650m",
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+ "task_type": "pair_prediction",
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+ "model_tag": "asym-ntv3-650m+ntv3-650m",
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+ "metrics": {
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+ "accuracy": 0.7109375,
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+ "f1": 0.7757575757575758,
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+ "precision": 0.6336633663366337,
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+ "recall": 1.0,
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+ "parse_rate": 1.0,
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+ "n": 128.0
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+ },
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+ "per_cell_type": {
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+ "Ex": {
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+ "accuracy": 0.7109375,
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+ "f1": 0.7757575757575758,
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+ "precision": 0.6336633663366337,
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+ "recall": 1.0,
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+ "parse_rate": 1.0,
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+ "n": 128.0
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+ }
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+ },
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+ "wall_seconds": 14.523783922195435,
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+ "config": {
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+ "train_jsonl": "/extra/zhanglab0/INDV/pengchx3/regureasoner_loop/data/prod_samples/train.pair_prediction.Ex.balanced512.jsonl",
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+ "eval_jsonl": "/extra/zhanglab0/INDV/pengchx3/regureasoner_loop/data/prod_samples/test.pair_prediction.Ex.balanced128.jsonl",
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+ "output_dir": "/extra/zhanglab0/INDV/pengchx3/regureasoner_loop/runs/exp_t2_pair_aux_tier_aware_supcon_20260425_192434_prod",
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+ "promoter_encoder": "ntv3-650m",
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+ "enhancer_encoder": "ntv3-650m",
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+ "freeze_promoter": true,
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+ "freeze_enhancer": true,
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+ "ntv3_snapshot_path": "/extra/zhanglab0/INDV/pengchx3/ntv3_local/generative",
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+ "cache_dir": null,
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+ "d_common": 512,
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+ "mlp_hidden": 512,
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+ "dropout": 0.1,
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+ "learning_rate": 0.0001,
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+ "epochs": 20,
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+ "batch_size": 8,
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+ "device": "cuda",
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+ "dtype": "bfloat16",
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+ "max_promoter_chars": 2048,
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+ "max_enhancer_chars": 2048,
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+ "split_name": null,
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+ "deepstarr_input_length": 600,
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+ "deepstarr_fc_dim": 256,
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+ "deepstarr_promoter_oracle_path": null,
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+ "deepstarr_enhancer_oracle_path": null,
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+ "aux_contrastive_loss": "tier_aware_supcon",
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+ "aux_contrastive_weight": 0.1,
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+ "aux_contrastive_temperature": 0.07,
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+ "aux_contrastive_margin": 0.2,
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+ "wandb_project": "dnathinker",
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+ "wandb_run_name": null,
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+ "wandb_mode": null,
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+ "wandb_tags": "t2,asym_pair,tier_aware_supcon,production"
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+ }
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+ }