sync: runs/exp_t2_pair_aux_tier_aware_supcon_20260425_192434_prod/metrics.json
Browse files
runs/exp_t2_pair_aux_tier_aware_supcon_20260425_192434_prod/metrics.json
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{
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"name": "asym-ntv3-650m+ntv3-650m",
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"task_type": "pair_prediction",
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"model_tag": "asym-ntv3-650m+ntv3-650m",
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"metrics": {
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"accuracy": 0.7109375,
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"f1": 0.7757575757575758,
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"precision": 0.6336633663366337,
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"recall": 1.0,
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"parse_rate": 1.0,
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"n": 128.0
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},
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"per_cell_type": {
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"Ex": {
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"accuracy": 0.7109375,
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"f1": 0.7757575757575758,
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"precision": 0.6336633663366337,
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"recall": 1.0,
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"parse_rate": 1.0,
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"n": 128.0
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}
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},
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"wall_seconds": 14.523783922195435,
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"config": {
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"train_jsonl": "/extra/zhanglab0/INDV/pengchx3/regureasoner_loop/data/prod_samples/train.pair_prediction.Ex.balanced512.jsonl",
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"eval_jsonl": "/extra/zhanglab0/INDV/pengchx3/regureasoner_loop/data/prod_samples/test.pair_prediction.Ex.balanced128.jsonl",
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"output_dir": "/extra/zhanglab0/INDV/pengchx3/regureasoner_loop/runs/exp_t2_pair_aux_tier_aware_supcon_20260425_192434_prod",
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"promoter_encoder": "ntv3-650m",
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"enhancer_encoder": "ntv3-650m",
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"freeze_promoter": true,
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"freeze_enhancer": true,
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"ntv3_snapshot_path": "/extra/zhanglab0/INDV/pengchx3/ntv3_local/generative",
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"cache_dir": null,
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"d_common": 512,
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"mlp_hidden": 512,
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"dropout": 0.1,
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"learning_rate": 0.0001,
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"epochs": 20,
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"batch_size": 8,
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"device": "cuda",
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"dtype": "bfloat16",
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"max_promoter_chars": 2048,
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"max_enhancer_chars": 2048,
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"split_name": null,
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"deepstarr_input_length": 600,
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"deepstarr_fc_dim": 256,
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"deepstarr_promoter_oracle_path": null,
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"deepstarr_enhancer_oracle_path": null,
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"aux_contrastive_loss": "tier_aware_supcon",
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"aux_contrastive_weight": 0.1,
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"aux_contrastive_temperature": 0.07,
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"aux_contrastive_margin": 0.2,
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"wandb_project": "dnathinker",
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"wandb_run_name": null,
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"wandb_mode": null,
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"wandb_tags": "t2,asym_pair,tier_aware_supcon,production"
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}
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}
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