en_ner_jnlpba_md / meta.json
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Update spaCy pipeline
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{
"lang":"en",
"name":"ner_jnlpba_md",
"version":"0.5.3",
"description":"Spacy Models for Biomedical Text.",
"author":"Allen Institute for Artificial Intelligence",
"email":"ai2-info@allenai.org",
"url":"https://allenai.github.io/SciSpaCy/",
"license":"CC BY-SA 3.0",
"spacy_version":">=3.6.1,<3.7.0",
"spacy_git_version":"458bc5f45",
"vectors":{
"width":200,
"vectors":50000,
"keys":4087446,
"name":"en_core_sci_md.vectors"
},
"labels":{
"tok2vec":[
],
"tagger":[
"$",
"''",
",",
"-LRB-",
"-RRB-",
".",
":",
"ADD",
"AFX",
"CC",
"CD",
"DT",
"EX",
"FW",
"HYPH",
"IN",
"JJ",
"JJR",
"JJS",
"LS",
"MD",
"NFP",
"NN",
"NNP",
"NNPS",
"NNS",
"PDT",
"POS",
"PRP",
"PRP$",
"RB",
"RBR",
"RBS",
"RP",
"SYM",
"TO",
"UH",
"VB",
"VBD",
"VBG",
"VBN",
"VBP",
"VBZ",
"WDT",
"WP",
"WP$",
"WRB",
"XX",
"``"
],
"attribute_ruler":[
],
"lemmatizer":[
],
"parser":[
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"acl",
"acl:relcl",
"acomp",
"advcl",
"advmod",
"amod",
"amod@nmod",
"appos",
"attr",
"aux",
"auxpass",
"case",
"cc",
"cc:preconj",
"ccomp",
"compound",
"compound:prt",
"conj",
"cop",
"csubj",
"dative",
"dep",
"det",
"det:predet",
"dobj",
"expl",
"intj",
"mark",
"meta",
"mwe",
"neg",
"nmod",
"nmod:npmod",
"nmod:poss",
"nmod:tmod",
"nsubj",
"nsubjpass",
"nummod",
"parataxis",
"pcomp",
"pobj",
"preconj",
"predet",
"prep",
"punct",
"quantmod",
"xcomp"
],
"ner":[
"CELL_LINE",
"CELL_TYPE",
"DNA",
"PROTEIN",
"RNA"
]
},
"pipeline":[
"tok2vec",
"tagger",
"attribute_ruler",
"lemmatizer",
"parser",
"ner"
],
"components":[
"tok2vec",
"tagger",
"attribute_ruler",
"lemmatizer",
"parser",
"ner"
],
"disabled":[
],
"performance":{
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"lemma_acc":0.0,
"dep_uas":0.0,
"dep_las":0.0,
"dep_las_per_type":0.0,
"sents_p":0.0,
"sents_r":0.0,
"sents_f":0.0,
"ents_f":0.7615577317,
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"ents_per_type":{
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"f":0.7237464522
},
"CELL_LINE":{
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},
"PROTEIN":{
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},
"CELL_TYPE":{
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},
"RNA":{
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"f":0.6063829787
}
},
"ner_loss":17189.9353724052
},
"sources":[
"JNLPBA",
"OntoNotes 5",
"Common Crawl",
"GENIA 1.0"
],
"requirements":[
]
}