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README.md
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## Dataset Structure
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### PMC-
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This file contains all information about patients summaries in PMC-Patients,
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- `patient_id`: string. A continuous id of patients, starting from 0.
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- `patient_uid`: string. Unique ID for each patient, with format PMID-x, where PMID is the PubMed Identifier of the source article of the patient and x denotes index of the patient in source article.
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- `patient`: string. Patient summary.
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- `age`: list of tuples. Each entry is in format `(value, unit)` where value is a float number and unit is in 'year', 'month', 'week', 'day' and 'hour' indicating age unit. For example, `[[1.0, 'year'], [2.0, 'month']]` indicating the patient is a one-year- and two-month-old infant.
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- `gender`: 'M' or 'F'. Male or Female.
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## Dataset Creation
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### Citation Information
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If you find PMC-Patients helpful in your research, please cite our work by:
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```
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@misc{zhao2023pmcpatients,
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title={PMC-Patients: A Large-scale Dataset of Patient Summaries and Relations for Benchmarking Retrieval-based Clinical Decision Support Systems},
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## Dataset Structure
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### PMC-Paitents.csv
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This file contains all information about patients summaries in PMC-Patients, with the following columns:
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- `patient_id`: string. A continuous id of patients, starting from 0.
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- `patient_uid`: string. Unique ID for each patient, with format PMID-x, where PMID is the PubMed Identifier of the source article of the patient and x denotes index of the patient in source article.
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- `patient`: string. Patient summary.
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- `age`: list of tuples. Each entry is in format `(value, unit)` where value is a float number and unit is in 'year', 'month', 'week', 'day' and 'hour' indicating age unit. For example, `[[1.0, 'year'], [2.0, 'month']]` indicating the patient is a one-year- and two-month-old infant.
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- `gender`: 'M' or 'F'. Male or Female.
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- `relevant_articles`: dict. The key is PMID of the relevant articles and the corresponding value is its relevance score (2 or 1 as defined in the ``Methods'' section).
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- `similar_patients`: dict. The key is patient_uid of the similar patients and the corresponding value is its similarity score (2 or 1 as defined in the ``Methods'' section).
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## Dataset Creation
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### Citation Information
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If you find PMC-Patients helpful in your research, please cite our work by:
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```
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@misc{zhao2023pmcpatients,
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title={PMC-Patients: A Large-scale Dataset of Patient Summaries and Relations for Benchmarking Retrieval-based Clinical Decision Support Systems},
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