wanyu/IteraTeR_v2 huggingface dataset:
Original: Network alignment aims to uncover topologically similar regions in the protein-protein interaction (PPI) networks of two or more species under the assumption that topologically similar regions  perform similar functions.
Revised: Network alignment aims to uncover topologically similar regions in the protein-protein interaction (PPI) networks of two or more species under the assumption that topologically similar regions tend to perform similar functions.
Edit intent: clarity
Original:  Although there exist a plethora of both network alignment algorithms and measures of topological similarity, currently no "gold standard " exists for evaluating how well either is able to uncover functionally similar regions.
Revised:  Although there exist a plethora of both network alignment algorithms and measures of topological similarity, currently no gold standard exists for evaluating how well either is able to uncover functionally similar regions.
Edit intent: fluency
Original:  The combination of transformers and self-supervised pretraining has , without exaggeration, revolutionized the fields of natural language processing (NLP), information retrieval (IR), and beyond.
Revised:  The combination of transformers and self-supervised pretraining has been responsible for a paradigm shift in natural language processing (NLP), information retrieval (IR), and beyond.
Edit intent: clarity
Original:  We cover a wide range of modern techniques, grouped into two high-level categories: transformer models that perform reranking in multi-stage ranking architectures and learned dense representations that attempt to perform ranking directly.
Revised:  We cover a wide range of modern techniques, grouped into two high-level categories: transformer models that perform reranking in multi-stage architectures and dense retrieval techniques that perform ranking directly.
Edit intent: clarity
Original:  There are two themes that pervade our survey: techniques for handling long documents, beyond the typical sentence-by-sentence processing approaches used in NLP, and techniques for addressing the tradeoff between effectiveness (  result quality) and efficiency ( query latency ).
Revised:  There are two themes that pervade our survey: techniques for handling long documents, beyond typical sentence-by-sentence processing approaches used in NLP, and techniques for addressing the tradeoff between effectiveness ( result quality) and efficiency ( query latency ).
Edit intent: fluency
Original:  There are two themes that pervade our survey: techniques for handling long documents, beyond the typical sentence-by-sentence processing approaches used in NLP, and techniques for addressing the tradeoff between effectiveness (  result quality) and efficiency ( query latency ).
Revised:  There are two themes that pervade our survey: techniques for handling long documents, beyond the typical sentence-by-sentence processing in NLP, and techniques for addressing the tradeoff between effectiveness ( result quality) and efficiency ( query latency ).
Edit intent: clarity
Original:  There are two themes that pervade our survey: techniques for handling long documents, beyond the typical sentence-by-sentence processing approaches used in NLP, and techniques for addressing the tradeoff between effectiveness (  result quality) and efficiency ( query latency ).
Revised:  There are two themes that pervade our survey: techniques for handling long documents, beyond the typical sentence-by-sentence processing approaches used in NLP, and techniques for addressing the tradeoff between effectiveness ( i.e., result quality) and efficiency ( query latency ).
Edit intent: coherence
Original:  Our implementation works in both 2d and 3d , in contrast to the existing finite element methods (FEM) whose implementations are currently limited to 2d .
Revised:  Our implementation works in both 2d and 3d .
Edit intent: clarity
Original:  In this paper, we combine these two kinds of methods for solving  Hamiltonian systems with highly oscillatory solution and the obtained algorithms respect the advantage of each method.
Revised:  In this paper, we blend these two kinds of methods for solving Hamiltonian systems with highly oscillatory solution and the obtained algorithms respect the advantage of each method.
Edit intent: fluency
Original:  In this paper, we combine these two kinds of methods for solving  Hamiltonian systems with highly oscillatory solution and the obtained algorithms respect the advantage of each method.
Revised:  In this paper, we combine these two kinds of methods for solving Hamiltonian systems with highly oscillatory solution , and the blended algorithms inherit and respect the advantage of each method.
Edit intent: clarity
Original:  Two kinds of algorithms are presented to preserve the symplecticity and energy of the Hamiltonian systems  .
Revised:  Two kinds of algorithms are presented to preserve the symplecticity and energy of the Hamiltonian systems , respectively .
Edit intent: clarity
Original:  A numerical experiment is carried out to support the theoretical results  by showing the performance of the obtained algorithms.
Revised:  A numerical experiment is carried out to support the theoretical results by showing the performance of the blended algorithms.
Edit intent: clarity
Original:  This generalizes earlier work by Rahman and Vir\'ag, which proves the analogous result for the weaker class of local algorithms.
Revised:  This generalizes earlier work by Rahman and Vir\'ag, which proved the analogous result for the weaker class of local algorithms.
Edit intent: fluency
Original: Subsurface formations provide giant capacities for renewable energy storage, when this energy is converted to green fuels such as hydrogen.
Edit intent: coherence
Original:  We demonstrate the possibility of overcoming the core limitation of latency--vs.--accuracy tradeoff by exploiting cross-modal dependencies - i.e., by compensating for the inferior performance of one model with an increased accuracy of more complex model of a different modality.
Revised:  We demonstrate the possibility of overcoming the core limitation of latency--vs.--accuracy tradeoff by exploiting cross-modal dependencies -- i.e., by compensating for the inferior performance of one model with an increased accuracy of more complex model of a different modality.
Edit intent: fluency
Original:  Nearly all characteristics of clinical atherosclerosis could be ideally interpreted with the theory and Bernoulli equation .
Revised:  Nearly all characteristics of clinical atherosclerosis could be ideally interpreted with the theory .
Edit intent: clarity
Original:  The main contribution of this paper is a fast gateway placement (F-GWP) algorithm for flying networks that determines the optimal position of an FGW.
Revised:  The main contribution of this paper is a fast gateway placement (F-GWP) algorithm for flying networks that determines the optimal position of a FGW.
Edit intent: fluency
Original:  The Internet has become a general network design paradigm.
Revised: Disruptive changes in vehicles and transportation have been triggered by automated, connected, electrified and shared mobility. Autonomous vehicles, like Internet data packets, are transported from one address to another through the road network. The Internet has become a general network design paradigm.
Edit intent: coherence
Original:  Here we consider the continuous /discontinuous Kaiser--Bessel, continuous \exp-type,  and continuous \cosh-type window functions  .
Revised:  Here we consider the continuous Kaiser--Bessel, continuous \exp-type, and continuous \cosh-type window functions .
Edit intent: clarity
Original:  We present novel explicit error estimates for NFFT with such a window function and derive rules for the optimal choice from the parameters involved in NFFT.
Revised:  We present novel explicit error estimates for NFFT with such a window function and derive rules for the optimal choice of the parameters involved in NFFT.
Edit intent: clarity
Original:  We give a fair ranking algorithm that takes any given ranking and outputs another ranking with simultaneous individual and group fairness guarantees comparable to the lower bound we prove.
Revised:  We give a fair ranking algorithm that takes any given ranking and outputs another ranking with simultaneous underranking and group fairness guarantees comparable to the lower bound we prove.
Edit intent: clarity
Original:  Our algorithm can be used to both pre-process training data as well as post-process the output of existing ranking algorithms .
Revised:  Our algorithm works with group fairness constraints for any number of groups .
Edit intent: clarity
Original:  Our experimental results  show that our algorithm performs better than the state-of-the-art fair learning to rank and fair post-processing baselines.
Revised:  Our experimental results show that our algorithm achieves the best of both when compared to the state-of-the-art fair learning to rank and fair post-processing baselines.
Edit intent: clarity
Original:  Our experimental results  show that our algorithm performs better than the state-of-the-art fair learning to rank and fair post-processing baselines.
Revised:  Our experimental results show that our algorithm performs better than the state-of-the-art baselines.
Edit intent: coherence
Original: A method of transitional automorphic mapping of the genome on itself (TAMGI) is aimed at combining detection and reconstruction of periodic motifs in the  genomic RNA/DNA sequences.
Revised: A method of Transitional Automorphic Mapping of the Genome on Itself (TAMGI) is aimed at combining detection and reconstruction of periodic motifs in the genomic RNA/DNA sequences.
Edit intent: fluency
Original:  In trying to answer these questions, We'll make a small introduction to the area of security research in artificial intelligence.
Revised:  In trying to answer these questions, the authors made a small introduction to the area of security research in artificial intelligence.
Edit intent: clarity
Original:  In trying to answer these questions, We'll make a small introduction to the area of security research in artificial intelligence.
Revised:  In trying to answer these questions, We'll make a small introduction to the area of safety research in artificial intelligence.
Edit intent: fluency
Original:  We'll review some of the current paradigms in the development of autonomous intelligent systems and evidence that we can use to prospect the coming of a possible technological Singularity.
Revised:  The authors review some of the current paradigms in the development of autonomous intelligent systems and evidence that we can use to prospect the coming of a possible technological Singularity.
Edit intent: clarity
Original:  We'll review some of the current paradigms in the development of autonomous intelligent systems and evidence that we can use to prospect the coming of a possible technological Singularity.
Revised:  We'll review some of the current paradigms in the development of autonomous intelligent systems , searching for evidence that may indicate the coming of a possible technological Singularity.
Edit intent: clarity
Original:  We'll review some of the current paradigms in the development of autonomous intelligent systems and evidence that we can use to prospect the coming of a possible technological Singularity.
Revised:  We'll review some of the current paradigms in the development of autonomous intelligent systems and evidence that we can use to prospect the coming of a possible Technological Singularity.
Edit intent: fluency
Original:  Finally, we will present a reflection using the COVID-19 pandemic, something that showed that our biggest problem in managing existential risks is our lack of coordination skills as a global society.
Revised:  Finally, we will present a reflection using the COVID-19 pandemic, something that showed that global society biggest problem in managing existential risks is our lack of coordination skills as a global society.
Edit intent: fluency
Original:  Finally, we will present a reflection using the COVID-19 pandemic, something that showed that our biggest problem in managing existential risks is our lack of coordination skills as a global society.
Revised:  Finally, we will present a reflection using the COVID-19 pandemic, something that showed that our biggest problem in managing existential risks is its lack of coordination skills as a global society.
Edit intent: clarity
Original:  Over the last decade, researchers have hypothesized that crowd-sourced mobile sensor data, collected ubiquitously and cheaply, will revolutionize our ability to maintain existing infrastructure .
Revised:  Over the last decade, researchers predicted that crowd-sourced mobile sensor data, collected ubiquitously and cheaply, will revolutionize our ability to maintain existing infrastructure .
Edit intent: clarity
Original:  Here we fill this knowledge gap by showing that critical physical properties of a real bridge can be determined  from everyday vehicle trip data.
Revised:  Here we fill this knowledge gap by showing that critical physical properties of a real bridge can be determined accurately from everyday vehicle trip data.
Edit intent: clarity
Original:  they certify the immediate value of large-scale data sources for studying the health of existing infrastructure, whether the data are crowdsensed or generated by organized vehicle fleets such as ridesourcing companies or municipalities 
Revised:  they certify the immediate value of large-scale data sources for studying the health of existing infrastructure, whether the data are crowdsensed or generated by organized vehicle fleets such as ridesourcing companies or municipalities .
Edit intent: fluency
Original: Space agencies and private companies prepare the beginning of the human space exploration for the 2030s with missions to put the first human on the Mars surface.
Revised: Space agencies and private companies prepare the beginning of human space exploration for the 2030s with missions to put the first human on the Mars surface.
Edit intent: fluency
Original:  The absence of gravity and radiation, along with distance, isolation and hostile environment are expected to increase medical events with unidentified manifestations along the crewmembers .
Revised:  The absence of gravity and radiation, along with distance, isolation and hostile environments, are expected to increase medical events with unidentified manifestations along the crewmembers .
Edit intent: fluency
Original:  The absence of gravity and radiation, along with distance, isolation and hostile environment are expected to increase medical events with unidentified manifestations along the crewmembers .
Revised:  The absence of gravity and radiation, along with distance, isolation and hostile environment are expected to increase medical events where previously unseen manifestations may arise .
Edit intent: clarity
Original:  The current healthcare strategy based on telemedicine and the possibility to stabilise and transport the injured crewmember to a terrestrial definitive medical facility is not applicable in exploration class missions.
Revised:  The current healthcare strategy based on telemedicine and the possibility to stabilize and transport the injured crewmember to a terrestrial definitive medical facility is not applicable in exploration class missions.
Edit intent: fluency
Original:  Therefore,  full autonomous capability to solve medical situations will guide design of future healthcare systems on-board.
Revised:  Therefore, the need for deploying the full autonomous capability to solve medical situations will guide design of future healthcare systems on-board.
Edit intent: clarity
Original:  Therefore,  full autonomous capability to solve medical situations will guide design of future healthcare systems on-board.
Revised:  Therefore, full autonomous capability to solve medical emergencies may guide the design of future healthcare systems on-board.
Edit intent: clarity
Original:  This study presents ten basic principles and the concept design of MEDEA, an on-board clinical decision support system to help crewmembers to deal with medical conditions, with special attention to emergency care situations and critical monitoring.
Revised:  This study presents ten basic principles and concept design of MEDEA, an on-board clinical decision support system to help crewmembers to deal with medical conditions, with special attention to emergency care situations and critical monitoring.
Edit intent: fluency
Original:  making them perfectly suitable as  learnable layer in a neural network.
Revised:  making them perfectly suitable as a learnable layer in a neural network.
Edit intent: fluency
Original:  Our maxdiff operation significantly increases the level of expressivity (for instance, it allows the definition of a length function) ;
Revised:  Our maxdiff operation significantly increases the level of expressivity ;
Edit intent: coherence
Original:  We obtain such results in this paper, via a thorough semantic analysis of the models of the theory and of their amalgamation properties.
Revised:  We obtain such results via a thorough semantic analysis of the models of the theory and of their amalgamation properties.
Edit intent: clarity
Original:  The results are modular with respect to the index theory and we show how to convert them into concrete interpolation algorithms via a hierarchical approach.
Revised:  The results are modular with respect to the index theory and it is shown how to convert them into concrete interpolation algorithms via a hierarchical approach.
Edit intent: clarity
Original:  In this paper , we present a novel study to address the optimal blind radio resource scheduling problem in orthogonal frequency division multiplexing access (OFDMA) systems towards minimizing long-term average AoI, which is proven to be the composition of time-domain-fair clustered round-robin and frequency-domain-fair intra-cluster sub-carrier assignment.
Revised:  In this article , we present a novel study to address the optimal blind radio resource scheduling problem in orthogonal frequency division multiplexing access (OFDMA) systems towards minimizing long-term average AoI, which is proven to be the composition of time-domain-fair clustered round-robin and frequency-domain-fair intra-cluster sub-carrier assignment.
Edit intent: fluency
Original:  In our previous paper "Prevalence of deficiency zero reaction networks in an Erdos-Renyi framework, " \textit{  we provided a framework to quantify the prevalence of deficiency zero among randomly generated reaction networks.
Revised:  In our previous paper \textit{ we provided a framework to quantify the prevalence of deficiency zero among randomly generated reaction networks.
Edit intent: coherence
Original:  In our previous paper "Prevalence of deficiency zero reaction networks in an Erdos-Renyi framework, " \textit{  we provided a framework to quantify the prevalence of deficiency zero among randomly generated reaction networks.
Revised:  In our previous paper "Prevalence of deficiency zero reaction networks in an Erdos-Renyi framework, " \textit{ , we provided a framework to quantify the prevalence of deficiency zero among randomly generated reaction networks.
Edit intent: fluency
Original:  Under this new framework, for each choice of control parameters \{i,j\}, we establish a threshold function r(n,\{i,j\}) such that the probability of the random network being deficiency zero converges to 1 if p_n \ll r(n,\{\alpha_{i,j\}) } {r(n,\{i,j\})}}\to  and converges to 0 if p_n \gg r(n,\{\alpha_{i,j\})} {r(n,\{\alpha_{i,j}\})}}\to  .
Revised:  Under this new framework, for each choice of control parameters \{i,j\}, we establish a threshold function r(n,\{i,j\}) such that the probability of the random network being deficiency zero converges to 1 if p_n \ll r(n,\{\alpha_{i,j\}) } {r(n,\{i,j\})}}\to 0 and converges to 0 if p_n \gg r(n,\{\alpha_{i,j\})} {r(n,\{\alpha_{i,j}\})}}\to .
Edit intent: fluency
Original:  Elucidating the behavior of particulate media, in concert with particle attrition (i.e., particle wear and subsequent particle fragmentation) is essential for predicting the performance and increasing the efficiency of engineering systems using such media.
Revised:  Elucidating particulate media's behavior in concert with particle attrition (i.e., particle wear and subsequent particle fragmentation) is essential for predicting the performance and increasing the efficiency of engineering systems using such media.
Edit intent: clarity
Original:  The proposed hybrid PeriDEM model opens a new avenue to explore the complicated interactions encountered in discrete particle dynamics that involve  formation of force chains, particle interlocking, particle attrition  , and the eventual breakage.
Revised:  The proposed hybrid PeriDEM model opens a new avenue to explore the complicated interactions encountered in discrete particle dynamics that involve the formation of force chains, particle interlocking, particle attrition , and the eventual breakage.
Edit intent: fluency
Original:  Although equivalent (at least in exact precision) , those algorithms typically exhibit significant differences in terms of performance , and naturally, we are interested in finding the fastest one(s) . In practice, we often observe that multiple algorithms yield comparable performance characteristics.
Revised:  Although equivalent (at least in exact precision) , those algorithms typically exhibit significant differences in terms of performance . In practice, we often observe that multiple algorithms yield comparable performance characteristics.
Edit intent: coherence
Original:  Therefore , we aim to identify  the subset of algorithms  that are reliably faster than the rest.
Revised:  For this reason , we aim to identify the subset of algorithms that are reliably faster than the rest.
Edit intent: coherence
Original:  Therefore , we aim to identify  the subset of algorithms  that are reliably faster than the rest.
Revised:  Therefore , we aim to identify the subset of algorithms , that are reliably faster than the rest.
Edit intent: fluency
Original:  The relative performance is encoded by sorting the algorithms based on pair-wise comparisons and  ranking them into equivalence classes, where more than one algorithm can obtain the same rank.
Revised:  The relative performance is encoded by sorting the algorithms based on pair-wise comparisons and by ranking them into equivalence classes, where more than one algorithm can obtain the same rank.
Edit intent: fluency
Original:  The relative performance is encoded by sorting the algorithms based on pair-wise comparisons and  ranking them into equivalence classes, where more than one algorithm can obtain the same rank.
Revised:  The relative performance is encoded by sorting the algorithms based on pair-wise comparisons and ranking them into equivalence (or performance) classes, so that multiple algorithms can obtain the same rank.
Edit intent: clarity
Original:  We show that the relative performance leads to robust identification of the fastest algorithms, that is, reliable identifications even with noisy system conditions 
Revised:  We show that this approach, based on relative performance, leads to robust identification of the fastest algorithms, that is, reliable identifications even with noisy system conditions 
Edit intent: clarity
Original:  We show that the relative performance leads to robust identification of the fastest algorithms, that is, reliable identifications even with noisy system conditions 
Revised:  We show that the relative performance leads to robust identification of the fastest algorithms, that is, reliable identification even under noisy system conditions 
Edit intent: clarity
Original:  We show that the relative performance leads to robust identification of the fastest algorithms, that is, reliable identifications even with noisy system conditions 
Revised:  We show that the relative performance leads to robust identification of the fastest algorithms, that is, reliable identifications even with noisy system conditions .
Edit intent: fluency