wanyu/IteraTeR_full_sent huggingface dataset:
Original:  First, we propose statistical tests to evaluate the quality of p-value  and the cross-batch comparability of any other statistic. Second, we propose a lasso based variable selection statistic, based on when the predictor variable first becomes active, and compute its p-value to achieve unified FDR control across multiple selections. In the end, we apply our tests on covTest, selectiveInference, and our statistic, based on real and null datasets for network inference in normal and high-dimensional settings. Results demonstrate higher p-value quality from our statistic and reveal p-value errors from others hidden before. We implement our statistic as lassopv in R .
Revised:  First, we propose statistical tests to evaluate the quality of p-value and computational biology. Lassopv is implemented in R and freely available at URL and URL
Edit intent: coherence
Original:  We obtain necessary and sufficient conditions for the existence of I(1) solutions to a given autoregressive law of motion generalizing the Johansen I(1) condition, and a characterization of such solutions. To accomplish this we obtain necessary and sufficient conditions for a pole in the inverse of a holomorphic index-zero Fredholm operator pencil to be simple, and a formula for its residue.
Revised:  We first obtain a range of necessary and sufficient conditions for a pole in the inverse of a holomorphic index-zero Fredholm operator pencil to be simple, and a formula for its residue.
Edit intent: clarity
Original:  To accomplish this we obtain necessary and sufficient conditions for a pole in the inverse of a holomorphic index-zero Fredholm operator pencil to be simple, and a formula for its residue. In the case of first order autoregressive dynamics with a unit root our results take a particularly simple form , with the residue associated with the simple pole at one proportional to a Riesz projection .
Revised:  To accomplish this we obtain necessary and sufficient conditions for a pole in the inverse of a holomorphic index-zero Fredholm operator pencil to be of first or second order. Those conditions form the basis for our development of I(1) and I(2) representations of autoregressive Hilbertian processes. Cointegrating and attractor subspaces are characterized in terms of the behavior of the autoregressive operator pencil in a neighborhood of one .
Edit intent: meaning-changed
Original: The main objective is to study no-arbitrage pricing of financial derivatives in the presence of funding costs, the counterparty credit risk and market frictions affecting the trading mechanism, such as collateralization and capital requirements.
Revised: The objective of this paper is to provide a comprehensive study no-arbitrage pricing of financial derivatives in the presence of funding costs, the counterparty credit risk and market frictions affecting the trading mechanism, such as collateralization and capital requirements.
Edit intent: clarity
Original:  To achieve our goals, we extend in several respects the nonlinear pricing approach developed in El Karoui and Quenez (1997) and El Karoui et al. (1997  ).
Revised:  To achieve our goals, we extend in several respects the nonlinear pricing approach developed in El Karoui and Quenez (1997) and El Karoui et al. (1997 ), which was subsequently continued in Bielecki and Rutkowski (2015 ).
Edit intent: meaning-changed
Original: Many biochemical reactions involve a stream of chemical reactants (ligand molecules) flowing over a surface to which other reactants (receptors) are confined. Scientists measure rate constants associated with these reactions  in an optical biosensor: an instrument in which ligand molecules are convected through a flow cell, over a surface on which receptors are immobilized.
Revised: Optical biosensors are often used to measure kinetic rate constants associated with these reactions in an optical biosensor: an instrument in which ligand molecules are convected through a flow cell, over a surface on which receptors are immobilized.
Edit intent: meaning-changed
Original:  Scientists measure rate constants associated with these reactions  in an optical biosensor: an instrument in which ligand molecules are convected through a flow cell, over a surface on which receptors are immobilized.
Revised:  Scientists measure rate constants associated with chemical reactions. Such instruments operate in the in an optical biosensor: an instrument in which ligand molecules are convected through a flow cell, over a surface on which receptors are immobilized.
Edit intent: meaning-changed
Original:  Scientists measure rate constants associated with these reactions  in an optical biosensor: an instrument in which ligand molecules are convected through a flow cell, over a surface on which receptors are immobilized.
Revised:  Scientists measure rate constants associated with these reactionssurface-volume in an optical biosensor: an instrument in which ligand molecules are convected through a flow cell, over a surface on which receptors are immobilized.
Edit intent: meaning-changed
Original:  Scientists measure rate constants associated with these reactions  in an optical biosensor: an instrument in which ligand molecules are convected through a flow cell, over a surface on which receptors are immobilized. In applications such as DNA damage repair multiple simultaneous reactions occur on the surface of the biosensor. We quantify transport effects on such multiple-component reactions, which result in a nonlinear set of integrodifferential equations for the reacting species concentrations.
Revised:  Scientists measure rate constants associated with these reactions in an optical biosensor: an instrument in which ligand molecules are convected through a flow cell, over a surface on which receptors are confined. Currently, scientists are using optical biosenors to measure the kinetic rate constants associated with DNA translesion synthesis--a process critical to DNA damage repair. Biosensor experiments to study this process involve multiple interacting components on the sensor surface. This multiple-component reactions, which result in a nonlinear set of integrodifferential equations for the reacting species concentrations.
Edit intent: clarity
Original:  We quantify transport effects on such multiple-component reactions, which result in a nonlinear set of integrodifferential equations for the reacting species concentrations.
Revised:  We quantify transport effects on such multiple-component biosensor experiment is modeled with a set of nonlinear integrodifferential equations (IDEs). It is shown that in physically relevant asymptotic limits these equations for the reacting species concentrations.
Edit intent: meaning-changed
Original:  We quantify transport effects on such multiple-component reactions, which result in a nonlinear set of integrodifferential equations for the reacting species concentrations. In physically relevant parameter regimes, these integrodifferential equations further reduce to a nonlinear set of ordinary differential equations, which may be used to estimate rate constants from biosensor data.
Revised:  We quantify transport effects on such multiple-component reactions, which result in a nonlinear set of integrodifferential equations reduce to a nonlinear set of ordinary differential equations, which may be used to estimate rate constants from biosensor data.
Edit intent: clarity
Original:  In physically relevant parameter regimes, these integrodifferential equations further reduce to a nonlinear set of ordinary differential equations, which may be used to estimate rate constants from biosensor data. We verify our results with a semi-implicit finite difference algorithm .
Revised:  In physically relevant parameter regimes, these integrodifferential equations further reduce to a much simpler set of Ordinary Differential Equations (ODEs). To verify the validity of our ODE approximation, a numerical method for the IDE system is developed and studied. Results from the ODE model agree with simulations of the IDE model, rendering our ODE model useful for parameter estimation .
Edit intent: meaning-changed
Original:  Based on a physical model that considers the kinetics of ribosomes advancing on the mRNA and diffusing in its surrounding,  we explain how the transcript length might play a central role in establishing ribosome recruitment and the overall translation rate of an mRNA.
Revised:  Based on a physical model that considers the kinetics of ribosomes advancing on the mRNA and diffusing in its surrounding, as well as mRNA circularisation and ribosome drop-off, we explain how the transcript length might play a central role in establishing ribosome recruitment and the overall translation rate of an mRNA.
Edit intent: meaning-changed
Original:  Based on a physical model that considers the kinetics of ribosomes advancing on the mRNA and diffusing in its surrounding,  we explain how the transcript length might play a central role in establishing ribosome recruitment and the overall translation rate of an mRNA.
Revised:  Based on a physical model that considers the kinetics of ribosomes advancing on the mRNA and diffusing in its surrounding, we explain how the transcript length may play a central role in establishing ribosome recruitment and the overall translation rate of an mRNA.
Edit intent: fluency
Original: Background: During asymmetric division of the Caenorhabditis elegans nematode zygote, the polarity cues distribution and daughter cell fates depend on the correct positioning of the mitotic spindle  which results from both centering and cortical pulling forces.
Revised: During the asymmetric division of the Caenorhabditis elegans nematode zygote, the polarity cues distribution and daughter cell fates depend on the correct positioning of the mitotic spindle which results from both centering and cortical pulling forces.
Edit intent: coherence
Original: Background: During asymmetric division of the Caenorhabditis elegans nematode zygote, the polarity cues distribution and daughter cell fates depend on the correct positioning of the mitotic spindle  which results from both centering and cortical pulling forces.
Revised: Background: During asymmetric division of the Caenorhabditis elegans nematode zygote, the polarity cues distribution and daughter cell fates depend on the correct positioning of the mitotic spindle , which results from both centering and cortical pulling forces.
Edit intent: fluency
Original:  Revealed by  spindle rocking, these pulling forces are regulated by the force generator dynamics, which are related to mitosis progression. This may be combined with a second regulation, this one by the posterior spindle pole position, which can be seen when comparing related species. Results: After delaying anaphase onset, we identified a positional pulling force regulation in C. elegans, which we ascribed to microtubule dynamics at the cortex.
Revised:  Revealed by spindle rocking, these pulling forces are regulated by the force generator dynamics, which are in turn consequent of mitotic progression. We found a novel, additional, regulation of these forces by the spindle position. It controls astral microtubule availability at the cortex, on which the active force generators can pull. Importantly, this positional control relies on the polarity dependent LET-99 cortical band, which restricts or concentrates generators to a posterior crescent. We ascribed this control to the microtubule dynamics at the cortex.
Edit intent: meaning-changed
Original:  We expanded our model of spindle rocking and predicted then experimentally validated that the oscillation onset position resists changes in cellular geometry and number of force generators. Consistent with final spindle position measurements, this new model accounts for a lower dependence on force generator dynamics and quantities than predicted by the previous model. Conclusion: The spindleposition regulates the rapid increase in forces needed for anaphase oscillation and positioning through the spatial modulation of microtubule-cortex contacts .
Revised:  We modelled this control, predicting and experimentally validating that the posterior crescent extent controlled where the anaphase oscillations started, in addition to mitotic progression. Finally, we propose that spatially restricting force generator to a posterior crescent sets the spindle's final position, reflecting polarity through the LET-99 dependent restriction of force generators to a posterior crescent .
Edit intent: clarity
Original: The 70 kDa Heat Shock Proteins Hsp70 have several essential functions in living systems, such as protecting proteins against protein aggregation, assisting protein folding, remodeling protein complexes and driving the translocation URLanelles.
Revised: The 70 kDa Heat Shock Proteins Hsp70 have several essential functions in living systems, such as protecting cells against protein aggregation, assisting protein folding, remodeling protein complexes and driving the translocation URLanelles.
Edit intent: clarity
Original:  Here we establish the thermodynamic bounds for ultra-affinity, and further show that the same reaction scheme can in principle be used both to strengthen and to weaken affinities (leading in this case to infra-affinity)  .
Revised:  Here we establish the thermodynamic bounds for ultra-affinity, and further show that the same reaction scheme can in principle be used both to strengthen and to weaken affinities (leading in this case to infra-affinity) . We show that cofactors are essential to achieve affinity beyond the equilibrium range .
Edit intent: meaning-changed
Original:  We develop a foundation for these off-path beliefs, and an associated equilibrium refinement, in a model where equilibrium arises from non-equilibrium learning by  long-lived senders and receivers.
Revised:  We develop a micro-foundation for these off-path beliefs, and an associated equilibrium refinement, in a model where equilibrium arises from non-equilibrium learning by long-lived senders and receivers.
Edit intent: meaning-changed
Original:  We develop a foundation for these off-path beliefs, and an associated equilibrium refinement, in a model where equilibrium arises from non-equilibrium learning by  long-lived senders and receivers.
Revised:  We develop a foundation for these off-path beliefs, and an associated equilibrium refinement, in a model where equilibrium arises from non-equilibrium learning by populations of patient and long-lived senders and receivers.
Edit intent: meaning-changed
Original:  In our model, non-equilibrium signals are sent by young senders as experiments to learn about receivers' behavior , and different types of senders have different incentives for these various experiments.
Revised:  In our model, young senders are uncertain about the prevailing distribution of play, so they rationally send out-of-equilibrium signals as experiments to learn about receivers' behavior , and different types of senders have different incentives for these various experiments.
Edit intent: meaning-changed
Original:  Using the Gittins index (Gittins, 1979), we characterize which sender types use each signal more often, leading to a constraint we call the "compatibility criterion" on the receiver's off-path beliefs and to the concept of a " type-compatible equilibrium.
Revised:  Using the Gittins index (Gittins, 1979), we characterize which sender types use each signal more often, leading to a constraint on the receiver's off-path beliefs and to the concept of a " type-compatible equilibrium.
Edit intent: clarity
Original:  Using the Gittins index (Gittins, 1979), we characterize which sender types use each signal more often, leading to a constraint we call the "compatibility criterion" on the receiver's off-path beliefs and to the concept of a " type-compatible equilibrium.
Revised:  Using the Gittins index (Gittins, 1979), we characterize which sender types use each signal more often, leading to a constraint we call the "compatibility criterion" on the receiver's off-path beliefs based on " type-compatible equilibrium.
Edit intent: clarity
Original:  Using the Gittins index (Gittins, 1979), we characterize which sender types use each signal more often, leading to a constraint we call the "compatibility criterion" on the receiver's off-path beliefs and to the concept of a " type-compatible equilibrium.
Revised:  Using the Gittins index (Gittins, 1979), we characterize which sender types use each signal more often, leading to a constraint we call the "compatibility criterion" on the receiver's off-path beliefs and to the concept of a " type-compatibility
Edit intent: clarity
Original:  In our model, young senders are uncertain about the prevailing distribution of play, so they rationally send out-of-equilibrium signals as experiments to learn about receivers' behavior . Differences in the payoff functions of the types of senders generate different incentives for these experiments.
Revised:  In our model, young senders are uncertain about the prevailing distribution of play, so they rationally send out-of-equilibrium signals as experiments to learn about the behavior of the population of receivers . Differences in the payoff functions of the types of senders generate different incentives for these experiments.
Edit intent: clarity
Original:  Using the Gittins index (Gittins, 1979), we characterize which sender types use each signal more often, leading to a constraint on the receiver's off-path beliefs based on " type-compatibility " and hence a learning-based equilibrium selection.
Revised:  Using the Gittins index (Gittins, 1979), we characterize which sender types use each signal more often, leading to a constraint on the receiver's off-path beliefs based on " type compatibility " and hence a learning-based equilibrium selection.
Edit intent: fluency
Original: We study the existence of portfolios of traded assets making a given financial institution pass some pre-specified (internal or external) regulatory test. In particular, we are interested in the existence of optimal portfolios , i.e. portfolios that allow to pass the test at the lowest cost, and in their sensitivity to changes in the underlying capital position.
Revised: We study the existence of portfolios of traded assets making a given financial institution pass some pre-specified eligible assets in order to pass a given capital adequacy test. From a capital efficiency perspective, it is important to identify the set of portfolios of eligible assets that allow to pass the test at the lowest cost, and in their sensitivity to changes in the underlying capital position.
Edit intent: clarity
Original:  In particular, we are interested in the existence of optimal portfolios , i.e. portfolios that allow to pass the test at the lowest cost, and in their sensitivity to changes in the underlying capital position.
Revised:  In particular, we are interested in the existence of optimal portfolios , i.e. portfolios that allow to pass the test by raising the least amount of capital. We study the existence and uniqueness of such optimal portfolios as well as their sensitivity to changes in the underlying capital position.
Edit intent: clarity
Original:  This  property is always satisfied if the test is based on a polyhedral risk measure such as Expected Shortfall, but it generally fails , even in a convex world, if we depart from polyhedrality .
Revised:  This "stability" property is always satisfied if the test is based on a polyhedral risk measure such as Expected Shortfall, but it generally fails , even in a convex world, if we depart from polyhedrality .
Edit intent: clarity
Original:  This  property is always satisfied if the test is based on a polyhedral risk measure such as Expected Shortfall, but it generally fails , even in a convex world, if we depart from polyhedrality . In this case, the optimal portfolio map may even fail to admit a continuous selection. Our results have applications to capital adequacy, pricingand hedging, and capital allocation .
Revised:  This property is always satisfied if the test is based on a polyhedral risk measure such as Expected Shortfall, but it generally fails , even in a convex world, if we depart from polyhedrality even when the reference risk measure is convex. However, lower semicontinuity can be often achieved if one if one is willing to focuses on portfolios that are close to being optimal. Besides capital adequacy, our results have a variety of natural applications to pricing, hedging, and capital allocation .
Edit intent: meaning-changed
Original:  Based on further analysis  our published experimental results, we propose that the mechanism of CQ action and resistance might be closely linked with cell-cycle-associated amplified genomic-DNA fragments (CAGFs, singular form = CAGF) as CQ induces CAGF production in P. falciparum, which could affect multiple biological processes of the parasite, and thus might contribute to parasite death and CQ resistance.
Revised:  Based on further analysis of our published experimental results, we propose that the mechanism of CQ action and resistance might be closely linked with cell-cycle-associated amplified genomic-DNA fragments (CAGFs, singular form = CAGF) as CQ induces CAGF production in P. falciparum, which could affect multiple biological processes of the parasite, and thus might contribute to parasite death and CQ resistance.
Edit intent: fluency
Original:  Our ultimate goal is to use utility theory to price non-replicable contingent claims in the case when the investor 's portfolio already contains a non-replicable component. We show that even in the simplest of settings - such as Samuelson's  model - conditional Davis prices are typically not unique and form a non-trivial  subinterval of the set of all no-arbitrage prices.
Revised:  Our ultimate goal is to use utility theory to price non-replicable contingent claims in the case when the investor 's portfolio already contains a non-replicable random endowment. We provide an example showing that even in the simplest of settings - such as Samuelson's model - conditional Davis prices are typically not unique and form a non-trivial subinterval of the set of all no-arbitrage prices.
Edit intent: clarity
Original:  We show that even in the simplest of settings - such as Samuelson's  model - conditional Davis prices are typically not unique and form a non-trivial  subinterval of the set of all no-arbitrage prices.
Revised:  We show that even in the simplest of settings - such as Samuelson's geometric Brownian motion model - conditional Davis prices are typically not unique and form a non-trivial subinterval of the set of all no-arbitrage prices.
Edit intent: meaning-changed
Original:  We show that even in the simplest of settings - such as Samuelson's  model - conditional Davis prices are typically not unique and form a non-trivial  subinterval of the set of all no-arbitrage prices.
Revised:  We show that even in the simplest of settings - such as Samuelson's model - the interval of marginal utility-based prices can be a non-trivial subinterval of the set of all no-arbitrage prices.
Edit intent: meaning-changed
Original:  We show that even in the simplest of settings - such as Samuelson's  model - conditional Davis prices are typically not unique and form a non-trivial  subinterval of the set of all no-arbitrage prices.
Revised:  We show that even in the simplest of settings - such as Samuelson's model - conditional Davis prices are typically not unique and form a non-trivial strict subinterval of the set of all no-arbitrage prices.
Edit intent: meaning-changed
Original:  As the first study of joint sGGM using the M-estimator framework, our work has three major contributions: (1) We solve FASJEM through an entry-wise manner which is parallelizable.
Revised:  As the first study of joint sGGM using the Elementary Estimator framework, our work has three major contributions: (1) We solve FASJEM through an entry-wise manner which is parallelizable.
Edit intent: meaning-changed