#genome
stringclasses
121 values
asm_name
stringclasses
120 values
assembly_accession
stringclasses
120 values
bioproject
stringclasses
45 values
biosample
stringclasses
120 values
wgs_master
float64
seq_rel_date
stringclasses
98 values
submitter
stringclasses
76 values
ftp_path
stringclasses
120 values
img_id
float64
637M
2.51B
gtdb_id
stringclasses
120 values
scope
stringclasses
3 values
assembly_level
stringclasses
1 value
genome_rep
stringclasses
1 value
refseq_category
stringclasses
3 values
release_type
stringclasses
2 values
taxid
float64
1.15k
681k
species_taxid
float64
7
911k
organism_name
stringclasses
120 values
infraspecific_name
stringclasses
112 values
isolate
stringclasses
1 value
superkingdom
stringclasses
2 values
phylum
stringclasses
18 values
class
stringclasses
30 values
order
stringclasses
56 values
family
stringclasses
75 values
genus
stringclasses
89 values
species
stringclasses
117 values
classified
bool
1 class
lv1_group
stringclasses
2 values
lv2_group
stringclasses
13 values
score_faa
float64
0.93
1
score_fna
float64
0.88
1
score_rrna
float64
0.1
1
score_trna
float64
0.6
1
total_length
float64
618k
9.12M
contigs
float64
1
22
gc
float64
22.5
72.2
n50
float64
616k
9.03M
l50
float64
1
1
proteins
float64
525
7.92k
protein_length
float64
172k
2.68M
coding_density
float64
74
96.9
completeness
float64
76.3
100
contamination
float64
0
4.4
strain_heterogeneity
float64
0
100
markers
float64
124
383
5s_rrna
stringclasses
2 values
16s_rrna
stringclasses
1 value
23s_rrna
stringclasses
1 value
trnas
float64
14
20
draft_quality
stringclasses
2 values
start_position
int64
0
10M
human_label
int64
0
1
autotrain_text
stringlengths
150
150
autotrain_label
class label
121 classes
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
6,323,850
1
AAACCTAAAAAGTCAATTTAATTATCTCATGATTTTGTGACTTGAACTGTGTTGTGAACATATTGACACAATATTTTTGTTCTTACAGGAAGTTGAGAGTGCTATGCTATGGCTCCTTTGTTATAAAATAGCATTTCTTTTTTTTTTTTT
120homo sapiens
G000007385
ASM738v1
GCF_000007385.1
PRJNA224116
SAMN02603680
null
2005/02/02
NIAB, Rural Development Administration
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/385/GCF_000007385.1_ASM738v1
637,000,346
GB_GCA_000007385.1
Multiisolate
Complete Genome
Full
representative genome
Major
291,331
347
Xanthomonas oryzae pv. oryzae KACC 10331
null
null
Bacteria
Proteobacteria
Gammaproteobacteria
Xanthomonadales
Xanthomonadaceae
Xanthomonas
Xanthomonas oryzae
true
Eubacteria
Proteobacteria
1
1
0.9
1
4,941,439
1
63.69
4,941,439
1
4,831
1,427,680
85.113992
99.82
0
0
355
yes
yes
yes
20
high
1,851,330
0
GGTCAGTTCGGCATGCACGCCGCTGTCCTTGAGGCGCACGCGGTAGTAACCGGGCGATGCGGCTTCGTCGGCATGGTCGTAGCGCGAGCGGTAGCCGGCATCCGGGTTATCGAGCGGGCCAGGTACCAGTTTGACCTCGCCGGTGGCGGG
113Xanthomonas oryzae pv. oryzae KACC 10331
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
5,339,250
1
TGGCAGTGTCCAGAGAATTACTGGGTGTGTGGACATGGGGGATTCCTGGTGTGTGGACACAGGGCATTACTGGTGCGTGGACAGAGGGGATTACTGGTGCGTGGACATGGGATTCCTGGTGTGTGGATACGGGGGATTACTGGTGTGTGG
120homo sapiens
G000010185
ASM1018v1
GCF_000010185.1
PRJNA224116
SAMD00060918
null
2008/02/14
Kitasato Institute for Life Sciences
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/185/GCF_000010185.1_ASM1018v1
641,522,627
RS_GCF_000010185.1
Monoisolate
Complete Genome
Full
representative genome
Major
334,413
1,260
Finegoldia magna ATCC 29328
strain=ATCC 29328
null
Bacteria
Firmicutes
Tissierellia
Tissierellales
Peptoniphilaceae
Finegoldia
Finegoldia magna
true
Eubacteria
Firmicutes
1
0.995
1
1
1,986,740
2
32.07
1,797,577
1
1,846
611,719
90.720879
99.39
0
0
282
yes
yes
yes
20
high
1,230,970
0
TCGCCCATTTTAATTTCTTTAAAATCAACATGTACATAATGATTTTTGAATGGGTGTTTTTGAACATCTTTAATAATTACTGTGTGTTCTTCACCGTCAACCTTAACATCGATTAAGCTTGAAGTACCAGCCATTAGGTGAACTTTTCTT
39Finegoldia magna ATCC 29328
G000007805
ASM780v1
GCF_000007805.1
PRJNA57967
SAMN02604017
null
2003/03/05
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/805/GCF_000007805.1_ASM780v1
2,508,501,074
RS_GCF_000007805.1
Multiisolate
Complete Genome
Full
reference genome
Major
223,283
251,701
[Pseudomonas syringae] pv. tomato str. DC3000
strain=DC3000
null
Bacteria
Proteobacteria
Gammaproteobacteria
Pseudomonadales
Pseudomonadaceae
Pseudomonas
Pseudomonas syringae group genomosp. 3
true
Eubacteria
Proteobacteria
1
0.997
0.9
1
6,538,260
3
58.34
6,397,126
1
5,862
1,948,843
87.825109
100
0.22
0
381
yes
yes
yes
20
high
3,392,480
0
CACGCGGATGATCGACCGCAACCATACCGACACCATCGACCTGATCCCCCAGCGCCAACAGACGCTGGGCCACCGTCGCCGGATCAAGGTCATCCAGGTAACCGATGACGACCTGGACACGCGCCCGCGTGAAAGTCGCTGCCGCGTTCG
119[Pseudomonas syringae] pv. tomato str. DC3000
G000009925
ASM992v1
GCF_000009925.1
PRJNA58195
SAMD00061068
null
2004/09/16
Kitasato Univ.
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/925/GCF_000009925.1_ASM992v1
637,000,025
RS_GCF_000009925.1
Monoisolate
Complete Genome
Full
reference genome
Major
295,405
817
Bacteroides fragilis YCH46
strain=YCH46
null
Bacteria
Bacteroidetes
Bacteroidia
Bacteroidales
Bacteroidaceae
Bacteroides
Bacteroides fragilis
true
Eubacteria
Bacteroidetes
1
0.998
0.9
1
5,310,990
2
43.2
5,277,274
1
4,416
1,603,639
88.979964
99.26
0
0
347
yes
yes
yes
20
high
3,325,660
0
TCTACCAATTTTTTGATTTCTTCTTCTGGATACACCCAACGAGAGGAAAATTCTGCATCTACACTATCACCATATCGATTGGTAAATTCGCTGAAAGTGTCATCCAAGAAAGCCTCTATTTTGTCGAGGTCTGTTTTATTTTCCGTTCTT
10Bacteroides fragilis YCH46
G000007485
ASM748v1
GCF_000007485.1
PRJNA224116
SAMN02603248
null
2003/02/24
Genoscope
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/485/GCF_000007485.1_ASM748v1
637,000,331
RS_GCF_000007485.1
Monoisolate
Complete Genome
Full
representative genome
Major
203,267
2,039
Tropheryma whipplei str. Twist
strain=Twist
null
Bacteria
Actinobacteria
Actinobacteria
Micrococcales
null
Tropheryma
Tropheryma whipplei
true
Eubacteria
Actinobacteria
1
1
1
1
927,303
1
46.33
927,303
1
934
278,179
88.37435
76.27
0
0
224
yes
yes
yes
20
medium
286,130
0
ATTGATGCGGGAAGGTTTTATACACGGTGATGTAATTACCGTTTCAGGCAGAACAATGGCCGAGGAGATATCTGATATCAATCCGGGCCTTCCCGACGGAAAGGTTATACACTCTTTTTCCTCACCTCTGCACCCAACAGGCGGTATAAA
106Tropheryma whipplei str. Twist
G000009985
ASM998v1
GCF_000009985.1
PRJNA224116
SAMD00061077
null
2005/12/01
Tokyo University of Agriculture and Technology, Japan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/985/GCF_000009985.1_ASM998v1
637,000,155
RS_GCF_000009985.1
Monoisolate
Complete Genome
Full
representative genome
Major
342,108
84,159
Magnetospirillum magneticum AMB-1
strain=AMB-1
null
Bacteria
Proteobacteria
Alphaproteobacteria
Rhodospirillales
Rhodospirillaceae
Magnetospirillum
Magnetospirillum magneticum
true
Eubacteria
Proteobacteria
1
1
0.9
1
4,967,148
1
65.09
4,967,148
1
4,628
1,522,305
90.298759
99
0
0
360
yes
yes
yes
20
high
1,686,360
0
CCGGCTGATAGGCCTCGTCGAACAGATCGTCGGGCGACAGCGCGCCCTTGGCCAGTTCCTGCTCGAACAGGGCGCCGATCTCCCGCGCCTTTTCCCGCGCCAGGGCGACGAACGGGGTTTCCTGGGTTTCGATGCCGGCCTCGGCGGTCA
56Magnetospirillum magneticum AMB-1
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,873,550
1
TGCAGGCAGGGCTGGGGTCTTCAGTGCCGCCTTTTGAGGTCTGAGGGGGCGTCACCTCCCCCATATGACTTCGTGGCTGTGAAACGTGGGTGGCGTGGGCCACGATTCTGCCTTCGCCCCAGCTTCCTGGGGGCGCTCCCGCCTTGCTCT
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,257,650
1
AACAACCCTGGATATTTGCATAAATTAAAGCTGTCAATAAGAAACCACTTCTATATGTATCCTTCTTTGGGTTTCTGGCTCAGGGGTTGGCAAAAATGGGTTATACATTTAAATAATATTTCAATCTTAGGTTAAGGAAAATTTCTCCTG
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,758,050
1
TGGAAGAACATTCCATGCTCATGGATAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTATAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATA
120homo sapiens
G000007825
ASM782v1
GCF_000007825.1
PRJNA57975
SAMN02603340
null
2004/07/06
INRA
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/825/GCF_000007825.1_ASM782v1
637,000,017
RS_GCF_000007825.1
Monoisolate
Complete Genome
Full
reference genome
Major
226,900
1,396
Bacillus cereus ATCC 14579
strain=ATCC 14579
null
Bacteria
Firmicutes
Bacilli
Bacillales
Bacillaceae
Bacillus
Bacillus cereus
true
Eubacteria
Firmicutes
1
0.998
1
1
5,427,083
2
35.29
5,411,809
1
5,541
1,546,426
83.933929
98.18
0.58
18.18
383
yes
yes
yes
20
high
2,633,930
0
ATGGGAATAGCCTCTTCGGTAAAGCGATTAAACAAGAGTGGTCTAGTTCCTGAAATTTTCACATTAGCACAAATTATTGACATTTAATTTACCTCCTAAAATAAAACCTATAAGTATTTATTGTCAAAATTTAATACTTTTAAACATAGG
7Bacillus cereus ATCC 14579
G000007645
ASM764v1
GCF_000007645.1
PRJNA57861
SAMN02603126
null
2002/12/20
Chinese National HGC, Shanghai
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/645/GCF_000007645.1_ASM764v1
637,000,281
RS_GCF_000007645.1
Monoisolate
Complete Genome
Full
reference genome
Major
176,280
1,282
Staphylococcus epidermidis ATCC 12228
strain=ATCC 12228
null
Bacteria
Firmicutes
Bacilli
Bacillales
Staphylococcaceae
Staphylococcus
Staphylococcus epidermidis
true
Eubacteria
Firmicutes
1
0.977
0.9
1
2,564,615
7
32.05
2,499,279
1
2,354
721,937
82.93198
99.81
0
0
345
yes
yes
yes
20
high
852,930
0
AAACAAAGAAATAAAAAGTGACTTAATTGAAGAAAATGTTAATGATGAAAACGACAATCAAAAAAATATTAATGATAAATTAAATGACCGTATTGTCCAAGAAACAAATGAAAGTCGTCAAAGTACTGAAGACGATGAGGAATTTCTACT
88Staphylococcus epidermidis ATCC 12228 ASM764v1
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,316,250
1
TGGAGACAGTGAAGGAGACCAGTTGGTTGCCGGATGAAAAACACACCATCTCATCAGCCTAGGATACACTCCTCCCCTCCATCCCCACCTGCCTGCCAGACAGACTCCAATTCAGGTCTCAAAGCTTTTTTTAATGAGAAGCTGCCACTG
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,819,100
1
TGCAAATAGTTTTTAAAATGTCAGAGTGCTACAAGTAAAACAAACAAAAAAAAAACCCAACCACTTCCTACCCCACCCCTTCCCACGCCCAACTGCTACACCCAAGAGGTGACAACTTACTATTCTTTTTACCTCTTCTGATATTTACTG
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,160,250
1
TCCCTGGCAAGAGAGAGAAGGATGGTTGGACGCTGAACAGTCCAGCTGACACTCGCAGCCCCAGATTCCACCCTGGTGGGGGCACCGGCCATCATGGTGTCTCCTAGATTTTGTGGTCCCAAAGAGAGATGGCCCCCAGCATCCCGATCT
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,723,500
1
GGTCTGATAAAATAAATGCATTCACATCTGATTTAACTCTTCTGCAAGTATAATTGCCTGTATCCCAGACTGAGCTAACATTCTTTCTAGCAGCCATGTGACCATGATCAAACGACCACAGAATATATGCTTCTTTACGTGCAACATACT
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,060,500
1
GGGGTGGCTGGTTAGGACAGGGAGGTGGATGCTTGGCCTAGAGTGGTGGGGGAGGTAGTGAGGGCTGCCTGGGAAGCAGGATGGCAGGGAGGGGGCTGGAGGTGGTGGCGGTGGCAGCTTGGATGGCCCTGGGAGGGGCAGGCCCGGGGC
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,448,750
1
TGGGCACACACACGAGCCGGGCTGGTTTCCTGCCGGTGCCCTCAGGGCTCATCCGAGGTCCCTTTGCCCAGGGCTCTCCAGACCTTTAAAACAGGAAGTTTAATTTTATAGAATTAAAAAAGAGCAAACGGTACTTAATTATCTGGCTGT
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
990,600
1
ACCAGCCTGGCCAACATGGCAAAACCCCATCTCTACAAAAAATACACAAAGTTTGGCCAGGCACGGTGGCTCACGCCTATAATCCCAGCACTTTGGGAGGCCAAGGCGGGTGGATCACAAGGTCAGGAGATGGAGACCATCCTGGCTAAC
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
981,900
1
AATGTCTACTTCAGGGACAAAGCAGCAGCCTCCTCAGCTACACAAGGATGAGCGAGCAGCCACCCTTCTGGATCTCCTGGCGAGGAGATGCGAGGTGAGGCCCCGCCCAGAGGGCTAGACCTGCAAGCCCCACCAGAGGCTGTGAGGACC
120homo sapiens
G000005825
ASM582v2
GCF_000005825.2
PRJNA224116
SAMN02603086
null
2010/12/15
Center for Genomic Sciences, Allegheny-Singer Research Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/005/825/GCF_000005825.2_ASM582v2
646,311,908
RS_GCF_000005825.2
Monoisolate
Complete Genome
Full
representative genome
Major
398,511
79,885
Bacillus pseudofirmus OF4
strain=OF4
null
Bacteria
Firmicutes
Bacilli
Bacillales
Bacillaceae
Bacillus
Bacillus pseudofirmus
true
Eubacteria
Firmicutes
1
0.995
1
1
4,249,248
3
39.86
3,858,997
1
4,260
1,228,222
85.144124
98.68
1.32
0
377
yes
yes
yes
20
high
3,179,150
0
TCTTCGTCTACTAAGAACGAAAAGAATGTTTTTAGAGTCTTTATATGATCGTTTACCGAACGTGGAGAAAGCCCTTTTGTTTGCACGTATTCCGGTTTGTGCTTATGGCCATCCCATCTAATACGTTCTCTAAGCAACCAAGCCACAAAG
9Bacillus pseudofirmus OF4
G000007825
ASM782v1
GCF_000007825.1
PRJNA57975
SAMN02603340
null
2004/07/06
INRA
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/825/GCF_000007825.1_ASM782v1
637,000,017
RS_GCF_000007825.1
Monoisolate
Complete Genome
Full
reference genome
Major
226,900
1,396
Bacillus cereus ATCC 14579
strain=ATCC 14579
null
Bacteria
Firmicutes
Bacilli
Bacillales
Bacillaceae
Bacillus
Bacillus cereus
true
Eubacteria
Firmicutes
1
0.998
1
1
5,427,083
2
35.29
5,411,809
1
5,541
1,546,426
83.933929
98.18
0.58
18.18
383
yes
yes
yes
20
high
2,263,690
0
CTGCAACATCTACCCAGCTACCATAAGTAGAGAATGAAGATTTTCTATCTGATTGATCTGTAGAACCAACTGCAATTACTTCGCTGTAATAAGCAGGGTAATTAGCTTTTGTATTTCCAGCATTTCCAGCAGCTGCAACTATAACAGAGC
7Bacillus cereus ATCC 14579
G000009765
ASM976v2
GCF_000009765.2
PRJNA224116
SAMD00061088
null
2016/03/24
NITE
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/765/GCF_000009765.2_ASM976v2
637,000,304
RS_GCF_000009765.2
Monoisolate
Complete Genome
Full
representative genome
Minor
227,882
33,903
Streptomyces avermitilis MA-4680 = NBRC 14893
strain=MA-4680
null
Bacteria
Actinobacteria
Actinobacteria
Streptomycetales
Streptomycetaceae
Streptomyces
Streptomyces avermitilis
true
Eubacteria
Actinobacteria
1
0.999
1
1
9,119,895
2
70.7
9,025,608
1
7,915
2,675,970
86.456522
99.89
0.79
0
356
yes
yes
yes
20
high
7,209,670
0
CTGCTGCGCCAGTACGTGAAGCCCGACGGCGGACTCGCCCTGCACGCCTCCGCCGAGGTCCGCGACCTCGACCCGTCGTACCGGAAGTTCGACGCGTAGTTCCTACGCCGTCGGGGGAGACGTCAGCGCGATCAGGCGGACGACGAGGTC
95Streptomyces avermitilis MA-4680 = NBRC 14893 MA-4680 ASM976v2
G000006965
ASM696v1
GCF_000006965.1
PRJNA57603
SAMEA3283068
null
2003/05/06
MELILO
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/965/GCF_000006965.1_ASM696v1
637,000,269
RS_GCF_000006965.1
Monoisolate
Complete Genome
Full
reference genome
Major
266,834
382
Sinorhizobium meliloti 1021
strain=1021
null
Bacteria
Proteobacteria
Alphaproteobacteria
Rhizobiales
Rhizobiaceae
Sinorhizobium
Sinorhizobium meliloti
true
Eubacteria
Proteobacteria
1
0.997
0.1
1
6,691,694
3
62.17
3,654,135
1
6,303
1,956,944
86.157242
99.28
0.31
0
373
yes
yes
yes
20
high
328,250
0
GCGATGGGTGCGGTGACGCCCTCGCGGGCGATGATCCAGGCGAGCGCGATCTCCGCCTGTTTCGCGCCGGTCTCCTCGGCGATTTCATCCAAGACGCCGAGGATGCGCATGCCGCGTCCGTCGAGATATTTTTCGACGCCGCCGCCGCGG
86Sinorhizobium meliloti 1021
G000008565
ASM856v1
GCF_000008565.1
PRJNA57665
SAMN02603976
null
2000/12/11
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/565/GCF_000008565.1_ASM856v1
637,000,092
RS_GCF_000008565.1
Monoisolate
Complete Genome
Full
reference genome
Major
243,230
1,299
Deinococcus radiodurans R1
strain=R1
null
Bacteria
Deinococcus-Thermus
Deinococci
Deinococcales
Deinococcaceae
Deinococcus
Deinococcus radiodurans
true
Eubacteria
Terrabacteria
1
0.991
0.8
1
3,284,156
4
66.61
2,648,638
1
3,248
987,980
88.625967
98.72
0
0
359
yes
yes
yes
20
high
1,730,300
0
TGGGGATGTTTTGCAGGTTGGGGTTGAGGCTGCTCAGACGCCCGGTCGCCACCGCCGTCTGCGCGAAGGTGGTGTGCAGGCGGCCCGTGTGCGGGTTGACGAGGTTGGGGATGGGGTCGAGGTAGGTGCCGCGCAGCTTGTCGAGTTCGC
35Deinococcus radiodurans R1 ASM856v1
G000008345
ASM834v1
GCF_000008345.1
PRJNA224116
SAMN02603281
null
2004/07/30
Goettingen Genomics Laboratory
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/345/GCF_000008345.1_ASM834v1
637,000,215
RS_GCF_000008345.1
Monoisolate
Complete Genome
Full
representative genome
Major
267,747
1,747
Propionibacterium acnes KPA171202
strain=KPA171202
null
Bacteria
Actinobacteria
Actinobacteria
Propionibacteriales
Propionibacteriaceae
Cutibacterium
Cutibacterium acnes
true
Eubacteria
Actinobacteria
1
1
1
1
2,560,265
1
60.01
2,560,265
1
2,373
780,330
89.799572
100
0
0
319
yes
yes
yes
20
high
2,002,130
0
CGGCAGGCTCAGGCACGAAGTCCTACGACGGCGAGATCCACGTGCACCCCAATTGGATGACGATTTGCGTCACTGTAGTGCTCGTCGCGACCGTTATCATCGTCTGAGGCTCACCGTACTCGGTTCCGCGGGCGAGGTTGCGACATCACC
77Propionibacterium acnes KPA171202
G000009985
ASM998v1
GCF_000009985.1
PRJNA224116
SAMD00061077
null
2005/12/01
Tokyo University of Agriculture and Technology, Japan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/985/GCF_000009985.1_ASM998v1
637,000,155
RS_GCF_000009985.1
Monoisolate
Complete Genome
Full
representative genome
Major
342,108
84,159
Magnetospirillum magneticum AMB-1
strain=AMB-1
null
Bacteria
Proteobacteria
Alphaproteobacteria
Rhodospirillales
Rhodospirillaceae
Magnetospirillum
Magnetospirillum magneticum
true
Eubacteria
Proteobacteria
1
1
0.9
1
4,967,148
1
65.09
4,967,148
1
4,628
1,522,305
90.298759
99
0
0
360
yes
yes
yes
20
high
1,421,030
0
ATAGGTTTCCGAGTGCTTGTAGTGAACATAGGCGATGCCGCGCCCGGTGCCGTCGCCGGCGGGGTTGGGCGAGGGGCGCGGCGCCCAGGCCATCATGGACGCGGCCTTGGTCAGCACGGCGACGCCCCGCAGATCCCGGAGGCCGATCAG
56Magnetospirillum magneticum AMB-1
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,232,850
1
GTGGGCTCTGTCACTGACAGCTGTGCACGCTGTATCATGAAGGCCTTAGGCTGGACTTCTGATCAATGCTTATGTATCTGTAGCCATCTTGATCAGAATGATCCAGGCAAGGGCCGCCGTGTCTCCACTGCCCGAGAGGTATGCAAAGAA
120homo sapiens
G000009945
ASM994v1
GCF_000009945.1
PRJNA224116
SAMD00061108
null
2006/03/09
Japanese Consortium/Yamaguchi Univ.
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/945/GCF_000009945.1_ASM994v1
637,000,067
RS_GCF_000009945.1
Monoisolate
Complete Genome
Full
representative genome
Major
264,202
83,556
Chlamydia felis Fe/C-56
strain=Fe/C-56
null
Bacteria
Chlamydiae
Chlamydiia
Chlamydiales
Chlamydiaceae
Chlamydia
Chlamydia felis
true
Eubacteria
Chlamydiae
1
0.992
1
1
1,173,791
2
39.34
1,166,239
1
994
361,027
90.6353
99.49
0
0
223
yes
yes
yes
20
high
514,150
0
CAAGAAGCAAACCCGAAAGACGTTGGATCTATTTCAATGCGAGTTTTTTTGCCTTGTTGAATATCATAGCCAACGACTTTCCCTAGAGTAGTTAACTCATCAAGACCACTTCCATGAAAAAGAAAAGTTCTCTGAGTGTTTTGAAACTGG
21Chlamydia felis Fe/C-56
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,881,000
1
CAGAAACGAAACACACCTAACAGCCATCGAGCACTGCCCACAGCACTTAGCATGGAAACTGAACGTCATCAAAGGAATTGCCCTAGAGGTCATCGCCTCCCTGGGTTTTGTGTTTCTTCCTCCCTAGGCTGTTGGGCTAACCCTGGACCA
120homo sapiens
G000011025
ASM1102v1
GCF_000011025.1
PRJNA224116
SAMD00060968
null
2010/01/05
Department of Bacteriology, Osaka Dental University
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/011/025/GCF_000011025.1_ASM1102v1
646,311,951
RS_GCF_000011025.1
Monoisolate
Complete Genome
Full
representative genome
Major
680,646
43,675
Rothia mucilaginosa DY-18
strain=DY-18
null
Bacteria
Actinobacteria
Actinobacteria
Micrococcales
Micrococcaceae
Rothia
Rothia mucilaginosa
true
Eubacteria
Actinobacteria
1
1
1
1
2,264,603
1
59.62
2,264,603
1
1,722
637,843
83.000906
99.33
0
0
293
yes
yes
yes
20
high
1,972,230
0
CCTCGCGGGCGTGACCACCGTGATCGTGGACGAGATTCACAACCTCGCCGCCACCAAGCGCGGCGCGCACCTGGCGGTCTCCCTCGAACGCCTCGATGCGCTCCTTGCGAAGCCAGCGCAGCGCATTGGTCTCTCCGCAACCGTCGAAAA
84Rothia mucilaginosa DY-18
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,190,900
1
GAAAAAAAAGTCTCAGGATATCGCATAGAGCACTATATTCTAAAGATATTTTCTGGCTACTTCTACAAACTCCCAGAACTTCCTTCAAGAATAAAAATAATATTTAACTCAAACGAAAGTGAGAGCTTCAGAGCAAGATTTTTCCACCTT
120homo sapiens
G000008685
ASM868v2
GCF_000008685.2
PRJNA57581
SAMN02603966
null
2011/11/09
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/685/GCF_000008685.2_ASM868v2
637,000,036
RS_GCF_000008685.2
Monoisolate
Complete Genome
Full
reference genome
Major
224,326
139
Borrelia burgdorferi B31
strain=B31
null
Bacteria
Spirochaetes
Spirochaetia
Spirochaetales
Borreliaceae
Borreliella
Borreliella burgdorferi
true
Eubacteria
Spirochaetes
1
0.879
1
0.9
1,521,208
22
28.18
910,724
1
1,511
441,681
85.52361
100
0
0
178
yes
yes
yes
20
high
812,110
0
ATAAATTGTTCTAACATAAATTCATCATAGCCCACGTCGTCAATGATTAAGTAAAACTTAGGTTTGCTTTTGGCTTTTTTATCCTCGTTGTTGTTTTTTATTATTAAGCTTTCTTTTTGTGTTTTTTCAAACCTATTTTTAAGTGGGGCA
14Borrelia burgdorferi B31
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,765,200
1
AAGGTCATAAAGATTTACCCCTGTTTTCATCTAAGAATCCAGGGTCTGGTTCTTGTATTTAAGTCACTGATTCTTTATGATTTACTTTTTGTAGATACTGTGAGGTAGAGGTTCAACTTCATTTTTTTTGCATGTGGCTATTGTTATTCC
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,513,300
1
ATGTAGAGTTATGGTAGAAACTACCAGAAGAAATAGCTGAAAAAGTTAAAAGTGGTTGGATGGAAGGGATGATGAGTGGAATATGATTGATGGCTGTTGGTTTTCATTAAGGGCCTTTTTTACCCTGTGATGTTCTAGATCTATATATAT
120homo sapiens
G000009705
ASM970v1
GCF_000009705.1
PRJNA224116
SAMD00061094
null
2004/05/11
Kazusa
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/705/GCF_000009705.1_ASM970v1
637,000,199
RS_GCF_000009705.1
Monoisolate
Complete Genome
Full
representative genome
Major
103,690
103,690
Nostoc sp. PCC 7120
null
null
Bacteria
Cyanobacteria
null
Nostocales
Nostocaceae
Nostoc
Nostoc sp. PCC 7120
true
Eubacteria
Cyanobacteria
1
0.992
0.9
1
7,211,789
7
41.27
6,413,771
1
6,159
2,024,679
82.716938
99.19
0
0
360
yes
yes
yes
20
high
3,180,840
0
ATTCCCGTGATGTCGCATTCCAATTATTTAATAATTCTGCTTCCTGAGCAGTTAATAAAGATAAATCAGATATTTTTGCATCAATATTTGTCACTATACTTTCTAAAAGCATCTGCCAATGCTCTGCTATTTGAGCAATAGTAGCAGCAT
70Nostoc sp. PCC 7120 ASM970v1
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,693,800
1
GCGTGCTACGGCGTCATGGAAGAACAGCAGAGGCGTTTGAGAATTGTGTTTTTTAAAAAGAGTTGAAACTTGTCAGTCAGGAAATGGAGTAACAGGTTTATCAGGAGTGTCATTTTCCTTTTTTTTTTTTTTTTCTCCCATGAGTGGCTT
120homo sapiens
G000009705
ASM970v1
GCF_000009705.1
PRJNA224116
SAMD00061094
null
2004/05/11
Kazusa
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/705/GCF_000009705.1_ASM970v1
637,000,199
RS_GCF_000009705.1
Monoisolate
Complete Genome
Full
representative genome
Major
103,690
103,690
Nostoc sp. PCC 7120
null
null
Bacteria
Cyanobacteria
null
Nostocales
Nostocaceae
Nostoc
Nostoc sp. PCC 7120
true
Eubacteria
Cyanobacteria
1
0.992
0.9
1
7,211,789
7
41.27
6,413,771
1
6,159
2,024,679
82.716938
99.19
0
0
360
yes
yes
yes
20
high
140,660
0
CTAACGCACGACGATGAGAGAGAACTAAGCGGTTACGTTCTTCGTCTACTTCTAGGAATTTTAAAGGCAGTTCTTCGCCTACTAATTCTTCTTTTGGTTTGCGGGTGCTGATGTGAGAACCGGGAATAAAGCCCCGTAGTCCTTCAATTC
70Nostoc sp. PCC 7120 ASM970v1
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,283,700
1
ATAACTGCAGTGTGATGGGATACACTTCTGCCTGAAGAACTTCCTCCATCTCACAGGGCAGATCTACTGGCAACAAACCCCACAACTTTTGTCTGAGGAAGTCTTTTGTGGGACTAGGTCTCACTCTATCACCCAGGCTACAGTGCAGTG
120homo sapiens
G000009945
ASM994v1
GCF_000009945.1
PRJNA224116
SAMD00061108
null
2006/03/09
Japanese Consortium/Yamaguchi Univ.
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/945/GCF_000009945.1_ASM994v1
637,000,067
RS_GCF_000009945.1
Monoisolate
Complete Genome
Full
representative genome
Major
264,202
83,556
Chlamydia felis Fe/C-56
strain=Fe/C-56
null
Bacteria
Chlamydiae
Chlamydiia
Chlamydiales
Chlamydiaceae
Chlamydia
Chlamydia felis
true
Eubacteria
Chlamydiae
1
0.992
1
1
1,173,791
2
39.34
1,166,239
1
994
361,027
90.6353
99.49
0
0
223
yes
yes
yes
20
high
1,086,800
0
CCTCTTCGGGTAATTCTGTTTCTCGGAAAAGTTCCCTGTAGACTCGGGTACATGAATTGCCTATTGAAAAACGCGGGGATCCTAATCTGTTATACCAGATCCTTGTAGCAACTCGACGTATCCTAGATAATAAACTTCTAAAAAATCCTT
21Chlamydia felis Fe/C-56
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,239,850
1
GGGGGCGGGAGGAGCCCAGCCCTGTGTGAGAGGGTCCAGAGGGCAGAACCTGCTTGCAAGAGCCAGACCAGCAGGACCCAACTGCAGGGCATTCCTGAGAGTCCCCTCAGTCCCAAAAACCCAGCGTCATGCCATTTACAATGAAGCCAT
120homo sapiens
G000007945
ASM794v1
GCF_000007945.1
PRJNA224116
SAMN02604087
null
2003/07/23
Univ. Ohio
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/945/GCF_000007945.1_ASM794v1
637,000,124
RS_GCF_000007945.1
Monoisolate
Complete Genome
Full
representative genome
Major
233,412
730
Haemophilus ducreyi 35000HP
strain=35000HP
null
Bacteria
Proteobacteria
Gammaproteobacteria
Pasteurellales
Pasteurellaceae
Haemophilus
[Haemophilus] ducreyi
true
Eubacteria
Proteobacteria
1
1
1
1
1,698,955
1
38.22
1,698,955
1
1,689
506,660
87.856241
99.43
0.02
0
277
yes
yes
yes
20
high
1,157,260
0
ATCCTTATGAATATTGTTGGAAGAACGGCAATTCCCGTTGGGATTTACTTGATTTAGTGCGCGCGTGCTATGCATTACGTCCGTCCGGCATTGAATGGCCTAAAAATGAAAAAGATGAACCTTCTTTCAAGTTAGAGCATTTGACGAAAG
44Haemophilus ducreyi 35000HP
G000008345
ASM834v1
GCF_000008345.1
PRJNA224116
SAMN02603281
null
2004/07/30
Goettingen Genomics Laboratory
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/345/GCF_000008345.1_ASM834v1
637,000,215
RS_GCF_000008345.1
Monoisolate
Complete Genome
Full
representative genome
Major
267,747
1,747
Propionibacterium acnes KPA171202
strain=KPA171202
null
Bacteria
Actinobacteria
Actinobacteria
Propionibacteriales
Propionibacteriaceae
Cutibacterium
Cutibacterium acnes
true
Eubacteria
Actinobacteria
1
1
1
1
2,560,265
1
60.01
2,560,265
1
2,373
780,330
89.799572
100
0
0
319
yes
yes
yes
20
high
447,850
0
ACTAATTGGCGTGAGGACGTACCCGTCCGTCGAATGTCTGGCACATCTCAACGATGCCCCGTTTGCGGCTACGGGAAACGCTCACGGGAGATATCATAACCGCTGTGCTGCTGTGACGATGGTGGCACAGTGGTGTCAACACGAGGAAGT
77Propionibacterium acnes KPA171202
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
6,588,450
1
GCAGGAGGATCACTTGATCCCAGAAGTTTGAGGCCAGCCTGGGCGATATACCGGGACCCCATCTCTACAAAAGATTTTTAAAAATTAGCTGGGCACAACGATGCACACCTGTAGTCCCAGCTACTTGGGAGGCTGGGGCAGGAGGATCGC
120homo sapiens
G000010165
ASM1016v1
GCF_000010165.1
PRJNA224116
SAMD00060942
null
2009/04/01
National Institute of Technology and Evaluation
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/165/GCF_000010165.1_ASM1016v1
643,692,011
RS_GCF_000010165.1
Monoisolate
Complete Genome
Full
representative genome
Major
358,681
1,393
Brevibacillus brevis NBRC 100599
strain=NBRC 100599 (= 47)
null
Bacteria
Firmicutes
Bacilli
Bacillales
Paenibacillaceae
Brevibacillus
Brevibacillus brevis
true
Eubacteria
Firmicutes
1
1
1
1
6,296,436
1
47.27
6,296,436
1
5,917
1,875,522
87.757979
99.73
0.27
0
381
yes
yes
yes
20
high
1,266,330
0
GATAAGAAGCGGGGCTTGACCCTCGTTTACACAGGAGACGGCAAAGGAAAAACGACGGCAGCAGTCGGATTGGCTGTGCGGGCGACAGGGCGCGGAAAAAAGGTGCTGATGGTTCAATTCATCAAGTCGCCGGAGCGAACATATGGAGAA
15Brevibacillus brevis NBRC 100599
G000007265
ASM726v1
GCF_000007265.1
PRJNA57943
SAMN02604013
null
2002/08/28
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/265/GCF_000007265.1_ASM726v1
637,000,285
RS_GCF_000007265.1
Monoisolate
Complete Genome
Full
reference genome
Major
208,435
1,311
Streptococcus agalactiae 2603V/R
strain=2603V/R
null
Bacteria
Firmicutes
Bacilli
Lactobacillales
Streptococcaceae
Streptococcus
Streptococcus agalactiae
true
Eubacteria
Firmicutes
1
1
1
1
2,160,267
1
35.65
2,160,267
1
2,106
643,747
87.791509
100
0.18
0
298
yes
yes
yes
20
high
663,910
0
AAAATTAGACCGTCCACCAGGAATTGATTTACCAGCACCAACTTCAATGAGAAGTTTTGATTATTCAACCCCACCGGGAACTAAGCCAAGCAAACCCAAAGATAGTTTATCAACTCCTCCAGGTTTCCCAGATTTAAACACGCCGCCGGA
91Streptococcus agalactiae 2603V/R
G000009985
ASM998v1
GCF_000009985.1
PRJNA224116
SAMD00061077
null
2005/12/01
Tokyo University of Agriculture and Technology, Japan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/985/GCF_000009985.1_ASM998v1
637,000,155
RS_GCF_000009985.1
Monoisolate
Complete Genome
Full
representative genome
Major
342,108
84,159
Magnetospirillum magneticum AMB-1
strain=AMB-1
null
Bacteria
Proteobacteria
Alphaproteobacteria
Rhodospirillales
Rhodospirillaceae
Magnetospirillum
Magnetospirillum magneticum
true
Eubacteria
Proteobacteria
1
1
0.9
1
4,967,148
1
65.09
4,967,148
1
4,628
1,522,305
90.298759
99
0
0
360
yes
yes
yes
20
high
3,055,260
0
CGCTATCGTCAACCACCGCACCCGGGAAGACGACGTCAACCGCATGGTTGATGCCGTCCTGGCCGTGTCAGCGAAGTAATGCTTAACCTTTTCGGGATAGTCTTGACTGTCCCATAGCCCAAGGAAATGCCGTGACATCAGGACAGGACA
56Magnetospirillum magneticum AMB-1
G000007565
ASM756v2
GCF_000007565.2
PRJNA57843
SAMN02603999
null
2016/02/26
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/565/GCF_000007565.2_ASM756v2
637,000,222
RS_GCF_000007565.2
Multiisolate
Complete Genome
Full
reference genome
Major
160,488
303
Pseudomonas putida KT2440
strain=KT2440
null
Bacteria
Proteobacteria
Gammaproteobacteria
Pseudomonadales
Pseudomonadaceae
Pseudomonas
Pseudomonas putida
true
Eubacteria
Proteobacteria
1
1
0.9
1
6,181,873
1
61.52
6,181,873
1
5,584
1,861,131
88.706707
99.97
1.2
0
381
yes
yes
yes
20
high
3,045,250
0
TTGTTCGCACCGGCCAACACCCTGGCGGCGCTGCTGGCGCTGAACTTCCCGGAAGCCGGCCCGAACGAGGTCGAAGTGCTGATGTACGCGGCACTGGTACTGATGTTCATCACCCTGCTGGTGAACGTCCTCGGCTCCATGATCATGCTC
78Pseudomonas putida KT2440
G000010605
ASM1060v1
GCF_000010605.1
PRJNA224116
SAMD00060929
null
2008/04/08
The University of Tokyo
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/605/GCF_000010605.1_ASM1060v1
641,522,653
RS_GCF_000010605.1
Monoisolate
Complete Genome
Full
representative genome
Major
455,632
1,911
Streptomyces griseus subsp. griseus NBRC 13350
strain=NBRC 13350
null
Bacteria
Actinobacteria
Actinobacteria
Streptomycetales
Streptomycetaceae
Streptomyces
Streptomyces griseus
true
Eubacteria
Actinobacteria
1
1
1
1
8,545,929
1
72.23
8,545,929
1
7,113
2,547,362
87.837226
99.84
0
0
357
yes
yes
yes
20
high
2,507,050
0
GTCCACGACGGACCCGACCGGCTCTACGAACTGCTGCGGGCCCGCTACCGGCTCTCCCAGAGCCCGGCCTCCGTCTACGGCCTGGACTACCACGAGGCCTCCGCCGTGCAGGCGGAGAAGGGCACGGACGAACTGGTCTCGCGGCTCGTC
96Streptomyces griseus subsp. griseus NBRC 13350
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,702,300
1
CTACCTGAAATCTGAGTGACTGCTTAAACCTGGACATTAGTAATTCCATCTAAATTATCTGTCAGTGCCTAAAAACAAAAGGGAGATGAAGATGCTGAACTCTTGAATTATTCTTCAAAAATTTTATCCCATCTAAGGGCCGGGCGTGGT
120homo sapiens
G000008865
ASM886v1
GCF_000008865.1
PRJNA57781
SAMN01911278
null
2004/05/11
GIRC
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/865/GCF_000008865.1_ASM886v1
637,000,108
RS_GCF_000008865.1
Monoisolate
Complete Genome
Full
reference genome
Major
386,585
562
Escherichia coli O157:H7 str. Sakai
strain=Sakai substr. RIMD 0509952
null
Bacteria
Proteobacteria
Gammaproteobacteria
Enterobacterales
Enterobacteriaceae
Escherichia
Escherichia coli
true
Eubacteria
Proteobacteria
1
0.996
0.9
1
5,594,477
3
50.48
5,498,450
1
5,399
1,663,868
87.620737
99.97
0.33
0
374
yes
yes
yes
20
high
1,377,870
0
TGTTTTTACCATTGTAATTCGTACTGGTCCTCAGTTTAAGTGAGTCTTACTGTACTCTGAAATATTACCTCTTTGGAGTAATGAGGTAATACGAAACAGTTTTATCAGGTTGTCTGTGCTGCTGGTTACCTCGTTTATTAATGCCGCGGT
38Escherichia coli O157:H7 str. Sakai Sakai substr. RIMD 0509952
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,085,550
1
GCTGCAGGAATAAGACAGACAAAGTCTGCTCTCTTGTAGGTTTCATCCTAGCGAGCAGATAGGAAGGGAGGGAGGGAGAAGGGCAGGAGGGAGGAAGGAAGAAAATACATTAGGAAGGGAAAGGTCAGTGCAGAGAATCAAAATGACTTG
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
649,200
1
ACCCAAATAAAGTGGCACCAAGGAAAGACAGACACAATCAGAGTTGGGGGGCGGGCACGGGCAAGGCCTCCTGCCCCAAGCACATCGCCAACAGGCCGGACCAACGGGATGAAGCTTAAAGACGCAGTCAGGACAGCAGGGAACGCGGGA
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,149,600
1
TCTGGCTAAATTTTGTATTTTTAGTAGAGACATGTTGGCCAGGCTGGTCTGGAATTCCTGAACTCAAGTGATCCACTGGCTTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAATCACTGTGAACCACTATACAGTTTTTGTATGTAA
120homo sapiens
G000009125
ASM912v1
GCF_000009125.1
PRJNA224116
SAMEA3138192
null
2003/05/06
Genoscope
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/125/GCF_000009125.1_ASM912v1
637,000,231
RS_GCF_000009125.1
Multiisolate
Complete Genome
Full
representative genome
Major
267,608
305
Ralstonia solanacearum GMI1000
strain=GMI1000
null
Bacteria
Proteobacteria
Betaproteobacteria
Burkholderiales
Burkholderiaceae
Ralstonia
Ralstonia solanacearum
true
Eubacteria
Proteobacteria
1
0.998
0.9
1
5,810,922
2
66.98
3,716,413
1
5,062
1,725,241
87.482692
99.94
0
0
373
yes
yes
yes
20
high
4,987,710
0
TTGCGCGCCCATTTCCGCGAGGCGATCGCGGTGGTCCGCGGCCTGCTCCAGTGCGTCGGCGAACGCGGCCGGATCGCCCGGCGGCACCGCGAAGCCGCAGCCGTGTCCGGTGATCAGCTCCGCCAGCCAACCCGGATAGTTGTTCAAGAC
81Ralstonia solanacearum GMI1000
G000007805
ASM780v1
GCF_000007805.1
PRJNA57967
SAMN02604017
null
2003/03/05
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/805/GCF_000007805.1_ASM780v1
2,508,501,074
RS_GCF_000007805.1
Multiisolate
Complete Genome
Full
reference genome
Major
223,283
251,701
[Pseudomonas syringae] pv. tomato str. DC3000
strain=DC3000
null
Bacteria
Proteobacteria
Gammaproteobacteria
Pseudomonadales
Pseudomonadaceae
Pseudomonas
Pseudomonas syringae group genomosp. 3
true
Eubacteria
Proteobacteria
1
0.997
0.9
1
6,538,260
3
58.34
6,397,126
1
5,862
1,948,843
87.825109
100
0.22
0
381
yes
yes
yes
20
high
3,771,950
0
CTGCGGAATCAGTGCGGATCACCCAGCCAGCGCTCAGCCGCCGCATAGAAAAACTTGAATCGGCGCTGAATGTGAAGCTGTTCGAGCGCACCACTCGCAAGGTCAGCCTGACCACTGTAGGCCGCGCATTTCTGCCGCAGGTCGAACGAA
119[Pseudomonas syringae] pv. tomato str. DC3000
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,140,000
1
GAAGAGCCTGGCCTGTAGATGCAAGCACGATGGAGCAGATGTGGGCCCTGCCCTGCCCTCTGGGAGGAAGTGTCCAGAAGAGACAAAACAGACATGAGCACAGCAACCCAGCTCCTTGGTGTGGACAACTTGCGGTACGTGCCGTGGTGG
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
208,350
1
TGTCATTTCATTGTCTCACCAAGAAATACTTGCATAAAGCAAGTTCAATTACAGTATCTGTTGAATATTTAAGGTTGAGTAAAGTGGGTGAGTTTAACAGATATTTTCCCTTATTTCTTTTAGGCAAATCTGGATTGGGAAAGTTGACAT
120homo sapiens
G000010085
ASM1008v1
GCF_000010085.1
PRJNA224116
SAMD00061079
null
2006/01/10
Kitasato Institute for Life Sciences, Japan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/085/GCF_000010085.1_ASM1008v1
637,000,270
RS_GCF_000010085.1
Monoisolate
Complete Genome
Full
representative genome
Major
343,509
63,612
Sodalis glossinidius str. 'morsitans'
strain=morsitans
null
Bacteria
Proteobacteria
Gammaproteobacteria
Enterobacterales
Pectobacteriaceae
Sodalis
Sodalis glossinidius
true
Eubacteria
Proteobacteria
1
0.993
1
1
4,292,502
4
54.5
4,171,146
1
5,742
1,142,020
78.310831
100
0
0
357
yes
yes
yes
20
high
774,540
0
CGCATCGCTCAGGCTATCGTCGCGCACAACCGGCAGCAGCCGATGACCCGCACCCGCGAACTGGCGGCGCTGATTGCCGATGCCAGCCCGTTTCGCGATAAGCATAAGCATCCGGCGACGCGCAGCTTCCAGGCGATCCGCATTTACATC
87Sodalis glossinidius str. 'morsitans' morsitans
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,518,600
1
CGGCCTCCCACAGTCCTGGGATTACAGGCATGAGCCACCACGCCTGGCCTTGTTTTGTTTTTGAGACAGGGTCTCGCTCTGTTGCCCAGGCTGGATTGTGGTGGCGCAACTATGGCTCACTGCAGCCTGGTCCTCCCCAGCTCAAGCGAT
120homo sapiens
G000009245
ASM924v1
GCF_000009245.1
PRJNA224116
SAMEA3138197
null
2006/03/02
LLNL
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/245/GCF_000009245.1_ASM924v1
637,000,111
RS_GCF_000009245.1
Monoisolate
Complete Genome
Full
na
Major
376,619
263
Francisella tularensis subsp. holarctica LVS
strain=LVS
null
Bacteria
Proteobacteria
Gammaproteobacteria
Thiotrichales
Francisellaceae
Francisella
Francisella tularensis
true
Eubacteria
Proteobacteria
1
1
0.9
1
1,895,994
1
32.15
1,895,994
1
2,100
571,581
88.799806
99.82
0.41
100
311
yes
yes
yes
20
high
1,409,590
0
AACTCAAGCAAATCTGATAGGTTCTTTAGCTAGTATTAACCTAGATGTTGACTACTATAAATACCTTGAGAAACTTTATGATGTAACAGTTAGTGACATTAATCGTGTACTTGATAGATATTTTGATAAACAAAACCTTGCATCTCTACA
40Francisella tularensis subsp. holarctica LVS ASM924v1
G000009745
ASM974v1
GCF_000009745.1
PRJNA224116
SAMD00061075
null
2003/10/03
NHRI, Taiwan
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/745/GCF_000009745.1_ASM974v1
637,000,337
RS_GCF_000009745.1
Multiisolate
Complete Genome
Full
representative genome
Major
196,600
672
Vibrio vulnificus YJ016
strain=YJ016
null
Bacteria
Proteobacteria
Gammaproteobacteria
Vibrionales
Vibrionaceae
Vibrio
Vibrio vulnificus
true
Eubacteria
Proteobacteria
1
0.996
1
1
5,260,086
3
46.68
3,354,505
1
4,639
1,553,759
87.03525
100
0.14
0
369
yes
yes
yes
20
high
5,099,770
0
ACAGATTACACCGCTTTGCATGTGTGAGTGAACGAAAAGGGAGATGTGGCCATCTCCCTTTGTTTGTATTGCTTAGAGGAACGCTTTGTAAGGCAGCTCAGGTTCATTTTTAAAGATGTCACTGAAGCCACGGAAGTGTTGGTAATGCAT
108Vibrio vulnificus YJ016
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
226,950
1
GAAACTGAACTGTTACACAACTTATAATTTTATTTTGGTAAAAGCATTCTTAGTTGCTGTGTTTAGTCATACTCTACAAATTATCTTGTTGGTAGGATAAATATGGTGAGAATTAAAGAAAAATGAAGATGGTAGTGGACATTTGCAGAC
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,406,750
1
GGCTTTGAGAATCCGGTCCCCCACCAGCTCCTCTGACCCGCCTGCACCTCTGCACCAGGCCCTTCTGCTGCTTCCCCTCCAGGGCTGTGGCCCCTCACGGGGGGTTTGTAGACGTACCCAGGGCCCAGCTGACCTGCCAGGGCCAGTGCC
120homo sapiens
G000008505
ASM850v1
GCF_000008505.1
PRJNA58089
SAMN02598265
null
2004/12/27
DOE Joint Genome Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/505/GCF_000008505.1_ASM850v1
637,000,023
RS_GCF_000008505.1
Monoisolate
Complete Genome
Full
reference genome
Major
281,309
1,428
[Bacillus thuringiensis] serovar konkukian str. 97-27
strain=97-27
null
Bacteria
Firmicutes
Bacilli
Bacillales
Bacillaceae
Bacillus
Bacillus thuringiensis
true
Eubacteria
Firmicutes
1
0.998
1
1
5,314,794
2
35.37
5,237,682
1
5,361
1,516,528
84.049767
99.07
0.31
0
381
yes
yes
yes
20
high
3,068,520
0
ATAAATAAAATATGTGGTTTATTTTCTATGTCAGTTCCTTTTAATACCTTATGCATCAATATCAGCTCCCCTAAAATGAACTCGTATATTCAATGTCAGTTCCTTTTAATATGCCTCGTCTTAACAACGCCACTAAACACAATGTTGTTC
118[Bacillus thuringiensis] serovar konkukian str. 97-27
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,643,100
1
TCTCTCACCAATCAGCACTCCTGGCTCACTAGCTTCTCCCCAACCATTTCATCTCTGACCAGTCAGCACTCCTGGCTCACTAGCTTTCCCCTGACCACTAAGTTGTCCTTAAAACTCTGATCCCCAAATGCTCAGGGAGACCAATTTGAG
120homo sapiens
G000009305
ASM930v1
GCF_000009305.1
PRJNA224116
SAMEA3138199
null
2006/06/28
Penn State Univ.
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/305/GCF_000009305.1_ASM930v1
637,000,130
RS_GCF_000009305.1
Monoisolate
Complete Genome
Full
representative genome
Major
382,638
212
Helicobacter acinonychis str. Sheeba
strain=Sheeba
null
Bacteria
Proteobacteria
Epsilonproteobacteria
Campylobacterales
Helicobacteraceae
Helicobacter
Helicobacter acinonychis
true
Eubacteria
Proteobacteria
1
0.994
0.9
1
1,557,588
2
38.17
1,553,927
1
1,547
470,618
89.011857
99.12
0.7
100
271
yes
yes
yes
20
high
1,287,520
0
TTTTTAGTGATTTCATTATTGAAGCTGTCAATGGAAAGGAAAATCATCAAAGCCCCCACCACTTCTTGCGTGTTTTCGCTCAATAAAGGCAAAAGTACATGAAGCCCATAAACTTCCTTGCCATCAGGCATTTTCCTATAAAAAGGCAAG
46Helicobacter acinonychis str. Sheeba
G000011025
ASM1102v1
GCF_000011025.1
PRJNA224116
SAMD00060968
null
2010/01/05
Department of Bacteriology, Osaka Dental University
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/011/025/GCF_000011025.1_ASM1102v1
646,311,951
RS_GCF_000011025.1
Monoisolate
Complete Genome
Full
representative genome
Major
680,646
43,675
Rothia mucilaginosa DY-18
strain=DY-18
null
Bacteria
Actinobacteria
Actinobacteria
Micrococcales
Micrococcaceae
Rothia
Rothia mucilaginosa
true
Eubacteria
Actinobacteria
1
1
1
1
2,264,603
1
59.62
2,264,603
1
1,722
637,843
83.000906
99.33
0
0
293
yes
yes
yes
20
high
943,410
0
GCTCGTAGCGCTCGCGACCCTCGGCGGAGGTGATCCACTCGGGGGTTTCGCGGGAGAAGCGGCCGTCGCGACCGATGAGGGCGCGGGTGTCCAGCTGCAGTTCACGCCACCAGGTGACGTCGGTGGTGTCACCGAAGGTACAGATCATGG
84Rothia mucilaginosa DY-18
G000009765
ASM976v2
GCF_000009765.2
PRJNA224116
SAMD00061088
null
2016/03/24
NITE
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/765/GCF_000009765.2_ASM976v2
637,000,304
RS_GCF_000009765.2
Monoisolate
Complete Genome
Full
representative genome
Minor
227,882
33,903
Streptomyces avermitilis MA-4680 = NBRC 14893
strain=MA-4680
null
Bacteria
Actinobacteria
Actinobacteria
Streptomycetales
Streptomycetaceae
Streptomyces
Streptomyces avermitilis
true
Eubacteria
Actinobacteria
1
0.999
1
1
9,119,895
2
70.7
9,025,608
1
7,915
2,675,970
86.456522
99.89
0.79
0
356
yes
yes
yes
20
high
3,315,130
0
GTTGGCGCCGGTGGAGGTGCCGGAGTAGTCGCGGAGCATGTCGTCGGGGATGAAGTGGCCGACGGCGGCGCAGGCGGCGGCTCGCCGCGCGGCCGAGAGCCGATCGTGCAGGGCGGCGACGATGTCCATGAGGAGGCGGGGGCTGCCGAT
95Streptomyces avermitilis MA-4680 = NBRC 14893 MA-4680 ASM976v2
G000010825
ASM1082v1
GCF_000010825.1
PRJNA224116
SAMD00060943
null
2009/08/26
Acetobacter pasteurianus genome sequencing consortium
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/825/GCF_000010825.1_ASM1082v1
644,736,321
RS_GCF_000010825.1
Monoisolate
Complete Genome
Full
representative genome
Major
634,452
438
Acetobacter pasteurianus IFO 3283-01
strain=IFO 3283 substr. IFO 3283-01
null
Bacteria
Proteobacteria
Alphaproteobacteria
Rhodospirillales
Acetobacteraceae
Acetobacter
Acetobacter pasteurianus
true
Eubacteria
Proteobacteria
1
0.982
0.9
1
3,340,249
7
53.1
2,907,495
1
3,156
1,006,859
88.810714
100
0
0
352
yes
yes
yes
20
high
1,406,470
0
CCTAATCTGGATGTTTCCATTGGCTATACGTATCTGGATACCAAAGTTTCCAATTCCCGTGTCAGCGATTTTGGCGGCGTTTACTCCCCGCACCACATGTTCAAATCCTGGGTGCATTACACCGTGCCTGATGGACGTCTGAAAGACCTG
0Acetobacter pasteurianus IFO 3283-01 IFO 3283 substr. IFO 3283-01
G000010625
ASM1062v1
GCF_000010625.1
PRJNA224116
SAMD00060936
null
2008/01/24
Kazusa DNA Research Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/625/GCF_000010625.1_ASM1062v1
641,522,640
RS_GCF_000010625.1
Monoisolate
Complete Genome
Full
representative genome
Major
449,447
1,126
Microcystis aeruginosa NIES-843
strain=NIES-843
null
Bacteria
Cyanobacteria
null
Chroococcales
Microcystaceae
Microcystis
Microcystis aeruginosa
true
Eubacteria
Cyanobacteria
1
1
0.9
1
5,842,795
1
42.33
5,842,795
1
5,605
1,591,543
80.239081
99.89
0.51
25
350
yes
yes
yes
20
high
5,228,600
0
AAGGTGGCTGTTCCCGCGCCTAGAAAGACTCTCCGAGTTATTTTATCGTTCATTGCTCGATTCTTGGTAAAGTTGTCTTTTCCTATTGTACAGCTATTGAGAATAATTCTTATCTGCGGGAGAAATTATTTGTCGGACTAGGGCGGTAAA
64Microcystis aeruginosa NIES-843
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,218,350
1
ATCTGACAGCCTGGAACAGCACCCTGCACCCCCAGGTGAGCATCCGACAGCCTGGAGCAGCAACCACACTCCCAGGCGAGCATCCGATGACCTGGAGCAGCACCCACAACCCCAAGTGAGCATCTGATTGTCTGGAGCAGCACCCACAAC
120homo sapiens
G000010505
ASM1050v1
GCF_000010505.1
PRJNA224116
SAMD00060922
null
2008/05/20
Kitasato University
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/505/GCF_000010505.1_ASM1050v1
642,555,148
RS_GCF_000010505.1
Monoisolate
Complete Genome
Full
representative genome
Major
431,947
837
Porphyromonas gingivalis ATCC 33277
strain=ATCC 33277
null
Bacteria
Bacteroidetes
Bacteroidia
Bacteroidales
Porphyromonadaceae
Porphyromonas
Porphyromonas gingivalis
true
Eubacteria
Bacteroidetes
1
1
0.9
1
2,354,886
1
48.36
2,354,886
1
1,981
685,765
85.805173
99.92
0
0
278
yes
yes
yes
20
high
774,280
0
TTCGTGGCACAATAGACATTGCCGTTAGAGTAAACTTCCTTGCCGGCAATAGACCCGATATTGATGATATGGCCGGCACTACGGGCTATCATACCCGGGCTGATTGTGCGAGTTACGTAGAGGAGTCCTTTGATATTAGTATCTATCATA
75Porphyromonas gingivalis ATCC 33277
G000010305
ASM1030v1
GCF_000010305.1
PRJNA224116
SAMD00060909
null
2009/04/01
National Institute of Technology and Evaluation
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/305/GCF_000010305.1_ASM1030v1
643,692,024
RS_GCF_000010305.1
Monoisolate
Complete Genome
Full
representative genome
Major
379,066
173,480
Gemmatimonas aurantiaca T-27
strain=T-27
null
Bacteria
Gemmatimonadetes
Gemmatimonadetes
Gemmatimonadales
Gemmatimonadaceae
Gemmatimonas
Gemmatimonas aurantiaca
true
Eubacteria
FCB
1
1
1
1
4,636,964
1
64.27
4,636,964
1
4,004
1,466,180
93.177023
98.9
4.4
0
353
yes
yes
yes
20
high
3,772,340
0
CGCCGGCAGCATGCGTGAGCTCGCGGAGCAGGTGGACATCGTCTGCATCTGTCTCACCGACACCAGCGCGGTGGAAGATGTGCTCTTCGGCGCAAACGGTATTGCGAGTGCCATGCGCGCTGGGCAATTGCTGGTCGATCTGTCGAGCAT
42Gemmatimonas aurantiaca T-27
G000007645
ASM764v1
GCF_000007645.1
PRJNA57861
SAMN02603126
null
2002/12/20
Chinese National HGC, Shanghai
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/645/GCF_000007645.1_ASM764v1
637,000,281
RS_GCF_000007645.1
Monoisolate
Complete Genome
Full
reference genome
Major
176,280
1,282
Staphylococcus epidermidis ATCC 12228
strain=ATCC 12228
null
Bacteria
Firmicutes
Bacilli
Bacillales
Staphylococcaceae
Staphylococcus
Staphylococcus epidermidis
true
Eubacteria
Firmicutes
1
0.977
0.9
1
2,564,615
7
32.05
2,499,279
1
2,354
721,937
82.93198
99.81
0
0
345
yes
yes
yes
20
high
2,241,330
0
ACTTTATTATCTGAAATACTAGGCAAATCTGTCAGACAAACAACGTAATCCCACTGATGTTCCTCTTTAATTTGTGCTGCTTTTTCAACACTTTCATGTACATCCTCTGCAGATCCTATCATGAGATCGACTTTAATGTCGAAATTCCAT
88Staphylococcus epidermidis ATCC 12228 ASM764v1
G000006965
ASM696v1
GCF_000006965.1
PRJNA57603
SAMEA3283068
null
2003/05/06
MELILO
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/965/GCF_000006965.1_ASM696v1
637,000,269
RS_GCF_000006965.1
Monoisolate
Complete Genome
Full
reference genome
Major
266,834
382
Sinorhizobium meliloti 1021
strain=1021
null
Bacteria
Proteobacteria
Alphaproteobacteria
Rhizobiales
Rhizobiaceae
Sinorhizobium
Sinorhizobium meliloti
true
Eubacteria
Proteobacteria
1
0.997
0.1
1
6,691,694
3
62.17
3,654,135
1
6,303
1,956,944
86.157242
99.28
0.31
0
373
yes
yes
yes
20
high
251,160
0
AACGCCACACGAGCGCCCTGCGTCAGGGAATGCACAGCTTTCCGCTGCCCTTCTCCCTACCGCAGATCACGGTTTCGCTGCTCTGGCATCCGCGGCTCGATGCCGATCCGGCGCATCGCTGGCTGCGCGGCTGCATTCGCGAGGTTTGCA
86Sinorhizobium meliloti 1021
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
4,176,900
1
CTGTGTTGCCCAAGCTGGTCTCAAATGCCTGAGCTCAAGCGATCATCCCACCTCAGCCTCCTAGAGTGCTGGGATTCCAGGCATGAGTCTCTGCACCCAGCCAGGCATCATGTTTGATGGATGAGGCAGGGCCAGGGTCATAGGCACAGG
120homo sapiens
G000007565
ASM756v2
GCF_000007565.2
PRJNA57843
SAMN02603999
null
2016/02/26
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/565/GCF_000007565.2_ASM756v2
637,000,222
RS_GCF_000007565.2
Multiisolate
Complete Genome
Full
reference genome
Major
160,488
303
Pseudomonas putida KT2440
strain=KT2440
null
Bacteria
Proteobacteria
Gammaproteobacteria
Pseudomonadales
Pseudomonadaceae
Pseudomonas
Pseudomonas putida
true
Eubacteria
Proteobacteria
1
1
0.9
1
6,181,873
1
61.52
6,181,873
1
5,584
1,861,131
88.706707
99.97
1.2
0
381
yes
yes
yes
20
high
1,477,450
0
GCACCATGTCGCCATCCCGATGACGGTGCTGGAGGAACTCGACAAGCTCAAGACCGGCAAACAGAGCATCGCCGCCGAATGCCGCCAGGCCATCCGCCTGATAGACCAGACCCTCGGTGACGCTTCGCCCAGCGATGTCGAGCAGGGCGT
78Pseudomonas putida KT2440
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
3,108,450
1
GGCCGCTTCCCGGAAGCACGTGCTCATGCACGCGCACTGCACAGAGACGCTCTGGGAGCGCCTTGCAAACCCCGTCTTGGCAGGACATGAAACCACTTGCCCGGACAGAAACCGACCACCACGGCGAACAATATTTGGCAGAGCTGAGAG
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
427,650
1
CCCGGCCACGCTGAGCTTCCAGCTGCCCCCAAGAAGACCGTCCCTTCCTGTGCTGCTGAGGAGGCCTCCCTCACGGGGTCTCAAGCTCCCAAGGGGAAGGGGGCCTCCCTCACGGGGTCTCAAGCTCCCAAGGAGAAGGGGGCCTCCCTC
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
6,070,650
1
GGTGGACAGACATTCAGGGTGATCAATGTGTATTACTCACCACAGGAAACATTGACTAACTCTTCCAGGGCTGAAAGGGTACTCTCAGTTAACTGAAGGCCTTTCCTTTTTTTCTCTCTTCTGATGCCAACAGACCTCAAGGCTAAATAT
120homo sapiens
G000009145
ASM914v1
GCF_000009145.1
PRJNA224116
SAMEA3138193
null
2003/05/06
DOE Joint Genome Institute
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/145/GCF_000009145.1_ASM914v1
637,000,195
RS_GCF_000009145.1
Multiisolate
Complete Genome
Full
representative genome
Major
228,410
915
Nitrosomonas europaea ATCC 19718
strain=ATCC 19718
null
Bacteria
Proteobacteria
Betaproteobacteria
Nitrosomonadales
Nitrosomonadaceae
Nitrosomonas
Nitrosomonas europaea
true
Eubacteria
Proteobacteria
0.98
1
0.9
1
2,812,094
1
50.72
2,812,094
1
2,670
848,291
88.875656
99.97
0.74
25
352
yes
yes
yes
20
high
1,133,470
0
GCTATCGTTTCCATCCTGCATCGCATCAGCGGTGTACTGCTTTTTCTTCCAGGAATCCCGTTATTCCTCTACGGGCTGCAAATGCTGCTGCAATCCCCTGAAACCTTCGCCAGCCTGCAGTCCAATCTGGCCCATCCGTTATGTAAACTG
69Nitrosomonas europaea ATCC 19718
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
1,228,200
1
AGCCAGGAGAGGAGGGAGGACGAGAGTAGACTCAGAGAAGGAGGATCCAAACAGAGGGCCCAGCCAGGGCAGGAGGCGGCGAGGCCACAGGGTCAGGGTGGCAAGGGCCTGCAGGTCATGGAAGGGATAACGAAGGCAACAGGAACGCGG
120homo sapiens
G000009865
ASM986v1
GCF_000009865.1
PRJNA224116
SAMD00061066
null
2005/06/30
NITE
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/009/865/GCF_000009865.1_ASM986v1
642,555,160
RS_GCF_000009865.1
Monoisolate
Complete Genome
Full
representative genome
Major
279,808
1,283
Staphylococcus haemolyticus JCSC1435
null
null
Bacteria
Firmicutes
Bacilli
Bacillales
Staphylococcaceae
Staphylococcus
Staphylococcus haemolyticus
true
Eubacteria
Firmicutes
1
0.989
1
1
2,697,861
4
32.78
2,685,015
1
2,600
785,925
85.820989
99.62
0
0
341
yes
yes
yes
20
high
6,110
0
GATAGATTGTTTGCCGAGCATTTTGAACGTTTCTTATATGAACATCCAAATGTTGCACGCATCGTTGTGGAAAAAGGAATTATGGCATCACGTGCACGTGTCGCAGCAAAGAAAGCACGTGAAGTGACACGTCGTAAATCAGCTTTAGAA
89Staphylococcus haemolyticus JCSC1435
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,335,550
1
TGGACCAAGGTGGATGGGTGCAGGGGTGGGGTCAAGTTTCTGCTAGTGTTTCTCAAGCTCCGTACCCTCAGGAGCAGCTGTTCATGTGTGAATGTTGAGTAGTCCTATTCCAGAGCTAAGTTTTGTGAAACGGAGTGAGAAGGGGGCAGG
120homo sapiens
G000010405
ASM1040v1
GCF_000010405.1
PRJNA224116
SAMD00060908
null
2007/05/08
Japan Agency for Maine-Earth Science and Technology
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/405/GCF_000010405.1_ASM1040v1
640,427,107
RS_GCF_000010405.1
Monoisolate
Complete Genome
Full
representative genome
Major
412,965
410,330
Candidatus Vesicomyosocius okutanii HA
strain=HA
null
Bacteria
Proteobacteria
Gammaproteobacteria
null
null
null
Calyptogena okutanii thioautotrophic gill symbiont
true
Eubacteria
Proteobacteria
1
1
1
1
1,022,154
1
31.59
1,022,154
1
976
297,702
85.803803
93.54
0
0
271
yes
yes
yes
20
high
0
0
ATGTCTCAAACTTGGTCACAATGCCTAAACACACTTAGAGATAGTATCCCACTTTCTCAATATAGTGTATGGATACAACCCTTAAAAGCACTTGAAAATAAAAACACATTATCTTTATTAGCACCTAATTCACAAGTACTTAACTACATT
20Candidatus Vesicomyosocius okutanii HA
G000007565
ASM756v2
GCF_000007565.2
PRJNA57843
SAMN02603999
null
2016/02/26
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/565/GCF_000007565.2_ASM756v2
637,000,222
RS_GCF_000007565.2
Multiisolate
Complete Genome
Full
reference genome
Major
160,488
303
Pseudomonas putida KT2440
strain=KT2440
null
Bacteria
Proteobacteria
Gammaproteobacteria
Pseudomonadales
Pseudomonadaceae
Pseudomonas
Pseudomonas putida
true
Eubacteria
Proteobacteria
1
1
0.9
1
6,181,873
1
61.52
6,181,873
1
5,584
1,861,131
88.706707
99.97
1.2
0
381
yes
yes
yes
20
high
4,523,090
0
GCCGAGATCGAAGCCGACATCCAGGCCCTGTACGCAGAGCGCCCAGCCCTGGCCATGGTCAACTCCGACAAAGGCATCACCAACCTGCACGTGCCGAGCGACGTGATCGTCGACGCCTCGATGCCGGCCATGATCCGTGACTCGGGCAAG
78Pseudomonas putida KT2440
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
2,712,300
1
TCTCAGAGTGGGATTTACTAAGCACGGTCACGCTGAACAGTAACTGTGGGCAGGGACAGCACTGCACGTTTGACATCGGGGCACGCAGCTCCGACGTGGCCGGTCCCGACTGGCACACCTGCCCCGAGTCACCTGGGACGGACTGCAGCC
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
5,979,600
1
AGAAAACATTGAGCACAGGGAGCGGGAAGGCTTGGGCCACAGGGGAGCTGGAGAAGGGGTCATGAGTCTGGGAGGAGAGGCCTCAATAGCCGCCCTCGGATGGGTTGGGGAGGGCCACCGCGCCTCTCAGCTTCAACGCCTTTCGCAAGT
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,430,400
1
CTGAGGGACCCTACAGCGATCGTGACCATCTTTATCCTGTTTCAGCTCATAAGTAAAACACTTTCAACATTTTCTCATTAAGAATAATGTTTACTTTGAGTCGATGCAGTTAGGTGTTTTAAAAAAATAAAATAATAATGTTTACTAATT
120homo sapiens
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
7,941,450
1
TTTCTGAACCACAGAGAAAGGAGGGCAGAGTTAAGGAAATAAATCAAAAGTTCCTCTGGGACGCACAAATGCCTACTTGGAACAGGCTTTCAGCATGAATATCCTCCACATTAAACAACAGGGAGGACTTTTCAAAATAAAAGCAGAAAA
120homo sapiens
G000006865
ASM686v1
GCF_000006865.1
PRJNA57671
SAMN02603339
null
2001/03/21
INRA
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/865/GCF_000006865.1_ASM686v1
637,000,144
RS_GCF_000006865.1
Monoisolate
Complete Genome
Full
reference genome
Major
272,623
1,358
Lactococcus lactis subsp. lactis Il1403
strain=IL1403
null
Bacteria
Firmicutes
Bacilli
Lactobacillales
Streptococcaceae
Lactococcus
Lactococcus lactis
true
Eubacteria
Firmicutes
1
1
1
1
2,365,589
1
35.33
2,365,589
1
2,383
693,662
86.378488
100
0
0
310
yes
yes
yes
20
high
1,298,830
0
ACTCGGCATGACGCATCACATTATGAAAGTTAATTGTATCCAGCGGGTCAATGATTTTAATATTACTATGTTCCAGTAATTTTTGCGCTTTTTCACGAATGATTGGATTCATATGAATTGGATAAATGATTTTATGTGTTTCTCTAAATT
54Lactococcus lactis subsp. lactis Il1403 IL1403
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,705,450
1
ACCTTGTGATCCGCCTTCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCATTGCACCCGGACAATTTTTGTATTTTTAGTAGTGACGGGGTTTCACCATGTTGGCCAGGCCTGTCTTGGACTCCTGACCTCAGGTGATCCATC
120homo sapiens
G000010185
ASM1018v1
GCF_000010185.1
PRJNA224116
SAMD00060918
null
2008/02/14
Kitasato Institute for Life Sciences
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/010/185/GCF_000010185.1_ASM1018v1
641,522,627
RS_GCF_000010185.1
Monoisolate
Complete Genome
Full
representative genome
Major
334,413
1,260
Finegoldia magna ATCC 29328
strain=ATCC 29328
null
Bacteria
Firmicutes
Tissierellia
Tissierellales
Peptoniphilaceae
Finegoldia
Finegoldia magna
true
Eubacteria
Firmicutes
1
0.995
1
1
1,986,740
2
32.07
1,797,577
1
1,846
611,719
90.720879
99.39
0
0
282
yes
yes
yes
20
high
717,730
0
TACACGGTTTATGGAGAAAGAACAAAAAAATCATATCATATTGGACAAAAAGTTAGAGTTAAAGTTATAAATAGCGATAAAGACAAGCGTCAAATAGATTTTGAATTTGTAAATTAGAAAAGGAATATAATGAGTGAAATAAAATTATTA
39Finegoldia magna ATCC 29328
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
8,056,050
1
AAAGAATCAGGAAAAAAGAACAACTAGAGAATCACAGACATCTGGTCTTAGATATATTAGAGTCTTCTAATTCATAAATTAACACAGTAGCCACGAGTCAAGGAAGAAGTGAAAAGAAGATTAAGAATGAAGTGTCAGCCGGGCAGGGCG
120homo sapiens
G000007005
ASM700v1
GCF_000007005.1
PRJNA224116
SAMN02603227
null
2002/11/25
European/Canadian Consortium
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/005/GCF_000007005.1_ASM700v1
638,154,518
RS_GCF_000007005.1
Monoisolate
Complete Genome
Full
representative genome
Major
273,057
2,287
Sulfolobus solfataricus P2
strain=P2
null
Archaea
Crenarchaeota
Thermoprotei
Sulfolobales
Sulfolobaceae
Sulfolobus
Sulfolobus solfataricus
true
Archaea
Crenarchaeota
0.96
1
1
0.9
2,992,245
1
35.79
2,992,245
1
3,281
874,971
86.125133
100
0
0
196
no
yes
yes
14
medium
501,540
0
CAGAAAAAAGATGGTAGTTTAGACTATCCACACCAAACAAGTTATGGTATTTCAGACAGAGCAGTAGCTTCAGTAATTGCAATACATGGAGATGATCACGGACCGGTTTTACCTCCTTCTGTAGCTCCCATTAAAGTAGTAGTAATACCC
97Sulfolobus solfataricus P2
human
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
null
9,037,350
1
AGATTTGTATGTTTTTGGTGTCAATTTCCTAGCAGTCAAGGGTCTTGAGGAAGAGATACTGTTTTCTAATTCTCACAGAGGAGGCTCTGATCCCGCGATGGCCCTGGTCAAGGCTGGAGTGAACCGGCTGCCTCACGTGCTGGGCGATAC
120homo sapiens
G000007825
ASM782v1
GCF_000007825.1
PRJNA57975
SAMN02603340
null
2004/07/06
INRA
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/825/GCF_000007825.1_ASM782v1
637,000,017
RS_GCF_000007825.1
Monoisolate
Complete Genome
Full
reference genome
Major
226,900
1,396
Bacillus cereus ATCC 14579
strain=ATCC 14579
null
Bacteria
Firmicutes
Bacilli
Bacillales
Bacillaceae
Bacillus
Bacillus cereus
true
Eubacteria
Firmicutes
1
0.998
1
1
5,427,083
2
35.29
5,411,809
1
5,541
1,546,426
83.933929
98.18
0.58
18.18
383
yes
yes
yes
20
high
1,076,790
0
TTCAATTATTTACTGTAGATGAACTATTTGGTGGTTGGAAAAAAGCACAGGAAAAACACTTTAATGACGGCGGCGTATTCGATAAAATTTATCAAAAATAATGCGTACTGCTAAAGGGGGATGAGGTGAAAGAGGATGAGGAAGAAACGT
7Bacillus cereus ATCC 14579
G000008325
ASM832v1
GCF_000008325.1
PRJNA224116
SAMN02603968
null
2005/05/18
TIGR
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/008/325/GCF_000008325.1_ASM832v1
637,000,166
RS_GCF_000008325.1
Monoisolate
Complete Genome
Full
representative genome
Major
243,233
414
Methylococcus capsulatus str. Bath
strain=Bath
null
Bacteria
Proteobacteria
Gammaproteobacteria
Methylococcales
Methylococcaceae
Methylococcus
Methylococcus capsulatus
true
Eubacteria
Proteobacteria
1
1
1
1
3,304,561
1
63.58
3,304,561
1
3,046
1,020,877
91.024466
99.2
0
0
357
yes
yes
yes
20
high
2,194,920
0
TGGAGGACTTCCCGCTGGCGCGGGTTCAGCCGTCCCAGCCATTCGTCGATTTTCTGTTCAATCCGCTCGGCGAGCAGCGTGTCGGTAACCGGGCTCTGGCTGTCATCCGGCGCCATGTCCAGCAAGGACTTGGAAGAATCGGCCGTTATC
63Methylococcus capsulatus str. Bath