thbndi commited on
Commit
a9ea6ba
1 Parent(s): 9b862a7

Update Mimic4Dataset.py

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Files changed (1) hide show
  1. Mimic4Dataset.py +12 -2
Mimic4Dataset.py CHANGED
@@ -61,6 +61,7 @@ class Mimic4Dataset(datasets.GeneratorBasedBuilder):
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  self.test_size = kwargs.pop("test_size",0.2)
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  self.val_size = kwargs.pop("val_size",0.1)
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  self.generate_cohort = kwargs.pop("generate_cohort",True)
 
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  if self.encoding == 'concat':
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  self.concat = True
@@ -524,10 +525,19 @@ class Mimic4Dataset(datasets.GeneratorBasedBuilder):
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  for key, data in dico.items():
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  cond_text,chart_text,meds_text,proc_text,out_text = generate_text(data,icd,items, self.feat_cond, self.feat_chart, self.feat_meds, self.feat_proc, self.feat_out)
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-
 
 
 
 
 
 
 
 
 
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  yield int(key),{
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  'label' : data['label'],
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- 'text': cond_text+chart_text+meds_text+proc_text+out_text
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  }
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  #############################################################################################################################
 
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  self.test_size = kwargs.pop("test_size",0.2)
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  self.val_size = kwargs.pop("val_size",0.1)
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  self.generate_cohort = kwargs.pop("generate_cohort",True)
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+ self.param = kwargs.pop("param",0)
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  if self.encoding == 'concat':
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  self.concat = True
 
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  for key, data in dico.items():
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  cond_text,chart_text,meds_text,proc_text,out_text = generate_text(data,icd,items, self.feat_cond, self.feat_chart, self.feat_meds, self.feat_proc, self.feat_out)
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+ if self.param==1:
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+ text= cond_text+chart_text+meds_text+proc_text+out_text
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+ elif self.param==2:
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+ text= cond_text
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+ elif self.param==3:
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+ text=cond_text+ chart_text
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+ elif self.param==4:
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+ text=cond_text+ chart_text+meds_text
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+ elif self.param==5:
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+ text=cond_text+ chart_text+meds_text+proc_text
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  yield int(key),{
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  'label' : data['label'],
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+ 'text': text
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  }
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  #############################################################################################################################