thbndi commited on
Commit
7e535bc
1 Parent(s): e210d12

Update Mimic4Dataset.py

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Files changed (1) hide show
  1. Mimic4Dataset.py +9 -7
Mimic4Dataset.py CHANGED
@@ -77,10 +77,10 @@ class Mimic4Dataset(datasets.GeneratorBasedBuilder):
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  "age": datasets.Value("int32"),
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  "COND": datasets.Sequence(datasets.Value("string")),
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- "PROC": datasets.Sequence(datasets.Value("int32"),
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- datasets.Sequence(datasets.Value("float32"))
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-
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- ),
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  "CHART": datasets.Sequence(
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  {
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  "signal" : datasets.Sequence(
@@ -133,15 +133,17 @@ class Mimic4Dataset(datasets.GeneratorBasedBuilder):
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  age = data['age']
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  gender = data['gender']
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  label = data['label']
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- dic = {'id': list(meds_features['signal'].keys()),
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- 'values' : list(meds_features['signal'].values())}
 
 
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  yield hid, {
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  "gender" : gender,
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  "ethnicity" : eth,
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  "age" : age,
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- "PROC" : proc_features,
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  "CHART" : None,
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  "OUT" : None,
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  "COND" : cond_features,
 
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  "age": datasets.Value("int32"),
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  "COND": datasets.Sequence(datasets.Value("string")),
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+ "PROC": {
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+ "id": datasets.Sequence(datasets.Value("int32")),
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+ "value": datasets.Sequence(datasets.Value("float32"))
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+ }),
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  "CHART": datasets.Sequence(
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  {
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  "signal" : datasets.Sequence(
 
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  age = data['age']
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  gender = data['gender']
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  label = data['label']
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+ items = list(proc_features.keys())
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+ values =[proc_features[i] for i in items ]
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+ procs = {"id" : id,
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+ "value": values}
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  yield hid, {
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  "gender" : gender,
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  "ethnicity" : eth,
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  "age" : age,
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+ "PROC" : procs,
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  "CHART" : None,
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  "OUT" : None,
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  "COND" : cond_features,