thbndi commited on
Commit
693843a
1 Parent(s): a6a588c

Update day_intervals_cohort_v22.py

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Files changed (1) hide show
  1. day_intervals_cohort_v22.py +2 -0
day_intervals_cohort_v22.py CHANGED
@@ -12,6 +12,8 @@ import disease_cohort
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  sys.path.append(os.path.dirname(os.path.abspath(__file__)) + './../..')
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  if not os.path.exists("./data/cohort"):
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  os.makedirs("./data/cohort")
 
 
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  def get_visit_pts(mimic4_path:str, group_col:str, visit_col:str, admit_col:str, disch_col:str, adm_visit_col:str, use_mort:bool, use_los:bool, los:int, use_admn:bool, disease_label:str,use_ICU:bool):
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  """Combines the MIMIC-IV core/patients table information with either the icu/icustays or core/admissions data.
 
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  sys.path.append(os.path.dirname(os.path.abspath(__file__)) + './../..')
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  if not os.path.exists("./data/cohort"):
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  os.makedirs("./data/cohort")
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+ if not os.path.exists("./data/summary"):
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+ os.makedirs("./data/summary")
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  def get_visit_pts(mimic4_path:str, group_col:str, visit_col:str, admit_col:str, disch_col:str, adm_visit_col:str, use_mort:bool, use_los:bool, los:int, use_admn:bool, disease_label:str,use_ICU:bool):
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  """Combines the MIMIC-IV core/patients table information with either the icu/icustays or core/admissions data.