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- ---
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- license: apache-2.0
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- ---
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
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+ ---
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+ license: apache-2.0
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+ tags:
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+ - biology
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+ - dna
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+ ---
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+
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+ # Dataset Card for Arabidopsis Genome Corpus
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+ ***
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+ ### Dataset Description
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+ This dataset consists of model plant genomes available on NCBI, specifically processed and cleaned for research and pre-training purposes.
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+ The default configuration, "6kbp," provides DNA chunks of 6.2kbp with a 100bp overlap on each side.
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+ The sequences are cleaned and processed to contain only the letters A, T, C, G, and N, ensuring high-quality genomic data suitable for various bioinformatics and machine learning applications.
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+
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+ ### Dataset Summary
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+ - Homepage: NCBI
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+ - License: NCBI Policies
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+ - Version: 1.1.0
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+ - Size: Variable depending on the configuration
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+ - Default Configuration: 6kbp chunks
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+
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+ ### Usage Example
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+ ```
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+ from datasets import load_dataset
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+
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+ chunk_length = 1024
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+ repo = "suke-sho/arabidopsis_genome_corpus"
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+ datasets = load_dataset(repo, trust_remote_code=True, chunk_length=chunk_length)
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+ ```
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+
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+ ### Acknowledgments
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+ This dataset is an adaptation of the "InstaDeepAI/plant-multi-species-genomes" dataset & script.
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+ Special thanks to InstaDeepAI for their original work.