Datasets:
gonzalobenegas
commited on
Commit
•
003aad2
1
Parent(s):
63037f6
Create README.md
Browse files
README.md
ADDED
@@ -0,0 +1,27 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
---
|
2 |
+
license: mit
|
3 |
+
tags:
|
4 |
+
- dna
|
5 |
+
- variant-effect-prediction
|
6 |
+
- biology
|
7 |
+
- genomics
|
8 |
+
---
|
9 |
+
# COSMIC variants
|
10 |
+
For more information check out our [paper](https://doi.org/10.1101/2023.10.10.561776) and [repository](https://github.com/songlab-cal/gpn).
|
11 |
+
|
12 |
+
## Usage
|
13 |
+
* Pandas
|
14 |
+
```python
|
15 |
+
import pandas as pd
|
16 |
+
df = pd.read_parquet("hf://datasets/songlab/cosmic/test.parquet")
|
17 |
+
```
|
18 |
+
* Polars
|
19 |
+
```python
|
20 |
+
import polars as pl
|
21 |
+
df = pl.read_parquet("https://huggingface.co/datasets/songlab/cosmic/resolve/main/test.parquet")
|
22 |
+
```
|
23 |
+
* Datasets
|
24 |
+
```python
|
25 |
+
from datasets import load_dataset
|
26 |
+
dataset = load_dataset("songlab/cosmic", split="test")
|
27 |
+
```
|