| from datasets import load_dataset | |
| import os | |
| import re | |
| from pathlib import Path | |
| from zipfile import ZipFile | |
| import tarfile | |
| FILE_PATH = "BARR2.tar.bz2" | |
| path = Path(__file__).parent.absolute() | |
| from urllib import request | |
| URL = 'https://temu.bsc.es/BARR2/downloads/background_set.raw_text.tar.bz2' | |
| FILE_ZIP = str(path) + os.sep + "BARR2.zip" | |
| FILE_ZIP_EXTRAC = str(path) + os.sep + "BARR2" | |
| if not os.path.exists( FILE_ZIP ): | |
| response = request.urlretrieve(URL, FILE_ZIP) | |
| # loading the temp.zip and creating a zip object | |
| if os.path.exists( FILE_ZIP_EXTRAC ): | |
| os.remove(FILE_ZIP_EXTRAC) | |
| os.makedirs(FILE_ZIP_EXTRAC) | |
| with tarfile.open(FILE_ZIP, 'r') as zObject: | |
| # Extracting specific file in the zip | |
| # into a specific location. | |
| zObject.extractall( FILE_ZIP_EXTRAC) | |
| zObject.close() | |
| #Open Zip | |
| # with open( str(path) + os.sep + 'example.txt', encoding='utf8') as file: | |
| # """ | |
| # # Build a dictionary with ICD-O-3 associated with | |
| # # healtcare problems | |
| # """ | |
| # linesInFile = file.readlines() | |
| # for index, iLine in enumerate(linesInFile): | |
| # print([linesInFile[index]]) if len(linesInFile[index]) > 1 else print('**************') if linesInFile[index] == '\n' else print ('******* ERROR ********') | |
| # if re.match('^Las dilataciones bronquiales',iLine): | |
| # break | |
| # code = listOfData[0] | |
| # description = reduce(lambda a, b: a + " "+ b, listOfData[1:2], "") | |
| # royalListOfCode[code.strip()] = description.strip() |