Kaggle competition: Quora Insincere Questions Classification
<SOS> metric: FScore_1 Kaggle data source: quora-insincere-questions-classification<set_options>
import re
import time
import gc
import random
import os
import numpy as np
import pandas as pd
from tqdm import tqdm
from sklearn.model_selection import train_test_split
from sklearn import metrics
from sklearn.model_selection import GridSearchCV, StratifiedKFold
from sklearn.metrics import f1_score, roc_auc_score
from tensorflow.keras.preprocessing.text import Tokenizer
from tensorflow.keras.preprocessing.sequence import pad_sequences
import torch
import torch.nn as nn
import torch.utils.data
%matplotlib inline
np.random.seed(2)
 sns.set(style='white', context='notebook', palette='deep' )<load_from_csv>
def seed_torch(seed=1029):
random.seed(seed)
 os.environ['PYTHONHASHSEED'] = str(seed)
 np.random.seed(seed)
 torch.manual_seed(seed)
 torch.cuda.manual_seed(seed)
 torch.backends.cudnn.deterministic = True
train = pd.read_csv(".. /input/train.csv")
 test = pd.read_csv(".. /input/test.csv")
 submit = pd.read_csv(".. /input/sample_submission.csv" )<prepare_x_and_y>
embed_size = 300
max_features = 95000
maxlen = 72
n_splits = 4
batch_size = 512
train_epochs = 4
SEED = 1029
seed_torch(SEED )
x_train = train.iloc[:,1:]
y_train = train.iloc[:,0]<feature_engineering>
puncts = [',', '.', '"', ':', ')', '(', '-', '!', '?', '|', ';', "'", '$', '&', '/', '[', ']', '>', '%', '=', '
'·', '_', '{', '}', '©', '^', '®', '`', '<', '→', '°', '€', '™', '›', '♥', '←', '×', '§', '″', '′', 'Â', '█', '½', 'à', '…',
'“', '★', '”', '–', '●', 'â', '►', '−', '¢', '²', '¬', '░', '¶', '↑', '±', '¿', '▾', '═', '¦', '║', '―', '¥', '▓', '—', '‹', '─',
'▒', '：', '¼', '⊕', '▼', '▪', '†', '■', '’', '▀', '¨', '▄', '♫', '☆', 'é', '¯', '♦', '¤', '▲', 'è', '¸', '¾', 'Ã', '⋅', '‘', '∞',
'∙', '）', '↓', '、', '│', '（', '»', '，', '♪', '╩', '╚', '³', '・', '╦', '╣', '╔', '╗', '▬', '❤', 'ï', 'Ø', '¹', '≤', '‡', '√', ]
def clean_text(x):
x = str(x)
 for punct in puncts:
x = x.replace(punct, f' {punct} ')
 return x
def clean_numbers(x):
x = re.sub('[0-9]{5,}', '
x = re.sub('[0-9]{4}', '
x = re.sub('[0-9]{3}', '
x = re.sub('[0-9]{2}', '
return x
mispell_dict = {"ain't": "is not", "aren't": "are not","can't": "cannot", "'cause": "because", "could've": "could have", "couldn't": "could not", "didn't": "did not", "doesn't": "does not", "don't": "do not", "hadn't": "had not", "hasn't": "has not", "haven't": "have not", "he'd": "he would","he'll": "he will", "he's": "he is", "how'd": "how did", "how'd'y": "how do you", "how'll": "how will", "how's": "how is", "I'd": "I would", "I'd've": "I would have", "I'll": "I will", "I'll've": "I will have","I'm": "I am", "I've": "I have", "i'd": "i would", "i'd've": "i would have", "i'll": "i will", "i'll've": "i will have","i'm": "i am", "i've": "i have", "isn't": "is not", "it'd": "it would", "it'd've": "it would have", "it'll": "it will", "it'll've": "it will have","it's": "it is", "let's": "let us", "ma'am": "madam", "mayn't": "may not", "might've": "might have","mightn't": "might not","mightn't've": "might not have", "must've": "must have", "mustn't": "must not", "mustn't've": "must not have", "needn't": "need not", "needn't've": "need not have","o'clock": "of the clock", "oughtn't": "ought not", "oughtn't've": "ought not have", "shan't": "shall not", "sha'n't": "shall not", "shan't've": "shall not have", "she'd": "she would", "she'd've": "she would have", "she'll": "she will", "she'll've": "she will have", "she's": "she is", "should've": "should have", "shouldn't": "should not", "shouldn't've": "should not have", "so've": "so have","so's": "so as", "this's": "this is","that'd": "that would", "that'd've": "that would have", "that's": "that is", "there'd": "there would", "there'd've": "there would have", "there's": "there is", "here's": "here is","they'd": "they would", "they'd've": "they would have", "they'll": "they will", "they'll've": "they will have", "they're": "they are", "they've": "they have", "to've": "to have", "wasn't": "was not", "we'd": "we would", "we'd've": "we would have", "we'll": "we will", "we'll've": "we will have", "we're": "we are", "we've": "we have", "weren't": "were not", "what'll": "what will", "what'll've": "what will have", "what're": "what are", "what's": "what is", "what've": "what have", "when's": "when is", "when've": "when have", "where'd": "where did", "where's": "where is", "where've": "where have", "who'll": "who will", "who'll've": "who will have", "who's": "who is", "who've": "who have", "why's": "why is", "why've": "why have", "will've": "will have", "won't": "will not", "won't've": "will not have", "would've": "would have", "wouldn't": "would not", "wouldn't've": "would not have", "y'all": "you all", "y'all'd": "you all would","y'all'd've": "you all would have","y'all're": "you all are","y'all've": "you all have","you'd": "you would", "you'd've": "you would have", "you'll": "you will", "you'll've": "you will have", "you're": "you are", "you've": "you have", 'colour': 'color', 'centre': 'center', 'favourite': 'favorite', 'travelling': 'traveling', 'counselling': 'counseling', 'theatre': 'theater', 'cancelled': 'canceled', 'labour': 'labor', 'organisation': 'organization', 'wwii': 'world war 2', 'citicise': 'criticize', 'youtu ': 'youtube ', 'Qoura': 'Quora', 'sallary': 'salary', 'Whta': 'What', 'narcisist': 'narcissist', 'howdo': 'how do', 'whatare': 'what are', 'howcan': 'how can', 'howmuch': 'how much', 'howmany': 'how many', 'whydo': 'why do', 'doI': 'do I', 'theBest': 'the best', 'howdoes': 'how does', 'mastrubation': 'masturbation', 'mastrubate': 'masturbate', "mastrubating": 'masturbating', 'pennis': 'penis', 'Etherium': 'Ethereum', 'narcissit': 'narcissist', 'bigdata': 'big data', '2k17': '2017', '2k18': '2018', 'qouta': 'quota', 'exboyfriend': 'ex boyfriend', 'airhostess': 'air hostess', "whst": 'what', 'watsapp': 'whatsapp', 'demonitisation': 'demonetization', 'demonitization': 'demonetization', 'demonetisation': 'demonetization'}
def _get_mispell(mispell_dict):
mispell_re = re.compile('(%s)' % '|'.join(mispell_dict.keys()))
return mispell_dict, mispell_re
mispellings, mispellings_re = _get_mispell(mispell_dict)
 def replace_typical_misspell(text):
def replace(match):
return mispellings[match.group(0)]
return mispellings_re.sub(replace, text )
x_train=x_train/255.0
test=test/255.0<train_model>
def load_and_prec() :
train_df = pd.read_csv(".. /input/train.csv")
 test_df = pd.read_csv(".. /input/test.csv")
 print("Train shape : ",train_df.shape)
 print("Test shape : ",test_df.shape)
 train_df["question_text"] = train_df["question_text"].progress_apply(lambda x: x.lower())
 test_df["question_text"] = test_df["question_text"].progress_apply(lambda x: x.lower())
 train_df["question_text"] = train_df["question_text"].progress_apply(lambda x: clean_text(x))
test_df["question_text"] = test_df["question_text"].progress_apply(lambda x: clean_text(x))
train_df["question_text"] = train_df["question_text"].progress_apply(lambda x: clean_numbers(x))
test_df["question_text"] = test_df["question_text"].progress_apply(lambda x: clean_numbers(x))
train_df["question_text"] = train_df["question_text"].progress_apply(lambda x: replace_typical_misspell(x))
test_df["question_text"] = test_df["question_text"].progress_apply(lambda x: replace_typical_misspell(x))
train_X = train_df["question_text"].fillna("_
test_X = test_df["question_text"].fillna("_
tokenizer = Tokenizer(num_words=max_features)
 tokenizer.fit_on_texts(list(train_X))
train_X = tokenizer.texts_to_sequences(train_X)
 test_X = tokenizer.texts_to_sequences(test_X)
 train_X = pad_sequences(train_X, maxlen=maxlen)
 test_X = pad_sequences(test_X, maxlen=maxlen)
 train_y = train_df['target'].values
np.random.seed(SEED)
 trn_idx = np.random.permutation(len(train_X))
train_X = train_X[trn_idx]
train_y = train_y[trn_idx]
return train_X, test_X, train_y, tokenizer.word_index
x_train = x_train.values.reshape(-1,28,28,1)
 test = test.values.reshape(-1,28,28,1 )<train_model>
def load_glove(word_index):
EMBEDDING_FILE = '.. /input/embeddings/glove.840B.300d/glove.840B.300d.txt'
def get_coefs(word,*arr): return word, np.asarray(arr, dtype='float32')
 embeddings_index = dict(get_coefs(*o.split(" ")) for o in open(EMBEDDING_FILE))
all_embs = np.stack(embeddings_index.values())
 emb_mean,emb_std = all_embs.mean() , all_embs.std()
embed_size = all_embs.shape[1]
nb_words = min(max_features, len(word_index))
embedding_matrix = np.random.normal(emb_mean, emb_std,(nb_words, embed_size))
for word, i in word_index.items() :
if i >= max_features: continue
embedding_vector = embeddings_index.get(word)
 if embedding_vector is not None: embedding_matrix[i] = embedding_vector
return embedding_matrix
def load_para(word_index):
EMBEDDING_FILE = '.. /input/embeddings/paragram_300_sl999/paragram_300_sl999.txt'
def get_coefs(word,*arr): return word, np.asarray(arr, dtype='float32')
 embeddings_index = dict(get_coefs(*o.split(" ")) for o in open(EMBEDDING_FILE, encoding="utf8", errors='ignore')if len(o)>100)
 all_embs = np.stack(embeddings_index.values())
 emb_mean,emb_std = all_embs.mean() , all_embs.std()
embed_size = all_embs.shape[1]
nb_words = min(max_features, len(word_index))
embedding_matrix = np.random.normal(emb_mean, emb_std,(nb_words, embed_size))
for word, i in word_index.items() :
if i >= max_features: continue
embedding_vector = embeddings_index.get(word)
 if embedding_vector is not None: embedding_matrix[i] = embedding_vector
return embedding_matrix
y_train=to_categorical(y_train,num_classes=10)
 print(x_train.shape,y_train.shape,test.shape )<define_variables>
tqdm.pandas()
start_time = time.time()
train_X, test_X, train_y, word_index = load_and_prec()
embedding_matrix_1 = load_glove(word_index)
 embedding_matrix_2 = load_para(word_index)
 total_time =(time.time() - start_time)/ 60
print("Took {:.2f} minutes".format(total_time))
embedding_matrix = np.mean([embedding_matrix_1, embedding_matrix_2], axis=0)
 print(np.shape(embedding_matrix))
del embedding_matrix_1, embedding_matrix_2
gc.collect()
num_classes = y_train.shape[1]
num_pixels = x_train.shape[1]<split>
class Attention(nn.Module):
def __init__(self, feature_dim, step_dim, bias=True, **kwargs):
super(Attention, self ).__init__(**kwargs)
 self.supports_masking = True
self.bias = bias
self.feature_dim = feature_dim
self.step_dim = step_dim
self.features_dim = 0
weight = torch.zeros(feature_dim, 1)
 nn.init.xavier_uniform_(weight)
 self.weight = nn.Parameter(weight)
 if bias:
self.b = nn.Parameter(torch.zeros(step_dim))
def forward(self, x, mask=None):
feature_dim = self.feature_dim
step_dim = self.step_dim
eij = torch.mm(
 x.contiguous().view(-1, feature_dim),
self.weight
).view(-1, step_dim)
 if self.bias:
eij = eij + self.b
eij = torch.tanh(eij)
 a = torch.exp(eij)
 if mask is not None:
a = a * mask
a = a / torch.sum(a, 1, keepdim=True)+ 1e-10
weighted_input = x * torch.unsqueeze(a, -1)
 return torch.sum(weighted_input, 1 )
seed=7
x_train, x_test, y_train, y_test = train_test_split(x_train, y_train, test_size=0.10, random_state=seed )<choose_model_class>
def sigmoid(x):
return 1 /(1 + np.exp(-x))
def threshold_search(y_true, y_proba):
best_threshold = 0
best_score = 0
for threshold in tqdm([i * 0.01 for i in range(100)]):
score = f1_score(y_true=y_true, y_pred=y_proba > threshold)
 if score > best_score:
best_threshold = threshold
best_score = score
search_result = {'threshold': best_threshold, 'f1': best_score}
return search_result
def cnn_model() :
model = Sequential()
model.add(Conv2D(filters = 32, kernel_size =(3,3),padding = 'Same',
activation ='relu', input_shape =(28,28,1)))
 model.add(Conv2D(filters = 32, kernel_size =(3,3),padding = 'Same',
activation ='relu'))
model.add(MaxPool2D(pool_size=(2,2)))
 model.add(Dropout(0.20))
model.add(Conv2D(filters = 64, kernel_size =(3,3),padding = 'Same',
activation ='relu'))
model.add(Conv2D(filters = 64, kernel_size =(3,3),padding = 'Same',
activation ='relu'))
model.add(MaxPool2D(pool_size=(2,2), strides=(2,2)))
 model.add(Dropout(0.20))
model.add(Flatten())
 model.add(Dense(128, activation = "relu"))
model.add(Dropout(0.5))
model.add(Dense(128, activation = "relu"))
model.add(Dropout(0.5))
model.add(Dense(10, activation = "softmax"))
model.compile(optimizer = 'adam' , loss = "categorical_crossentropy", metrics=["accuracy"])
 return model
model=cnn_model()<train_model>
x_test_cuda = torch.tensor(test_X, dtype=torch.long ).cuda()
test = torch.utils.data.TensorDataset(x_test_cuda)
 test_loader = torch.utils.data.DataLoader(test, batch_size=batch_size, shuffle=False )
datagen = ImageDataGenerator(
 rotation_range=10,
zoom_range = 0.1,
width_shift_range=0.1,
height_shift_range=0.1)
 datagen.fit(x_train )<train_model>
def train_pred(model, train_X, train_y, val_X, val_y, epochs=2):
valid_preds = np.zeros(( val_X.size(0)))
 test_preds = np.zeros(len(test_X))
for e in range(epochs):
start_time = time.time()
model.cuda()
loss_fn = torch.nn.BCEWithLogitsLoss(reduction="sum")
 optimizer = torch.optim.Adam(model.parameters())
 train = torch.utils.data.TensorDataset(train_X, train_y)
 valid = torch.utils.data.TensorDataset(val_X, val_y)
 train_loader = torch.utils.data.DataLoader(train, batch_size=batch_size, shuffle=True)
 valid_loader = torch.utils.data.DataLoader(valid, batch_size=batch_size, shuffle=False)
 model.train()
avg_loss = 0.
 for x_batch, y_batch in tqdm(train_loader, disable=True):
y_pred = model(x_batch)
 loss = loss_fn(y_pred, y_batch)
 optimizer.zero_grad()
loss.backward()
optimizer.step()
avg_loss += loss.item() / len(train_loader)
 model.eval()
avg_val_loss = 0.
 for i,(x_batch, y_batch)in enumerate(valid_loader):
y_pred = model(x_batch ).detach()
avg_val_loss += loss_fn(y_pred, y_batch ).item() / len(valid_loader)
 valid_preds[i * batch_size:(i+1)* batch_size] = sigmoid(y_pred.cpu().numpy())[:, 0]
elapsed_time = time.time() - start_time
print('Epoch {}/{} \t loss={:.4f} \t val_loss={:.4f} \t time={:.2f}s'.format(
 e + 1, epochs, avg_loss, avg_val_loss, elapsed_time))
model.eval()
for i,(x_batch,)in enumerate(test_loader):
y_pred = model(x_batch ).detach()
test_preds[i * batch_size:(i+1)* batch_size] = sigmoid(y_pred.cpu().numpy())[:, 0]
return valid_preds, test_preds
history = model.fit_generator(datagen.flow(x_train,y_train, batch_size=batch_size),
epochs = epochs, validation_data =(x_test,y_test),
verbose = 1, steps_per_epoch=x_train.shape[0], callbacks=callbacks_list )<predict_on_test>
class NeuralNet1(nn.Module):
def __init__(self):
super(NeuralNet1, self ).__init__()
hidden_size = 40
self.embedding = nn.Embedding(max_features, embed_size)
 self.embedding.weight = nn.Parameter(torch.tensor(embedding_matrix, dtype=torch.float32))
self.embedding.weight.requires_grad = False
self.embedding_dropout = nn.Dropout2d(0.1)
 self.gru_1 = nn.GRU(embed_size, hidden_size, bidirectional=True, batch_first=True)
 self.gru_2 = nn.GRU(hidden_size*2, hidden_size, bidirectional=True, batch_first=True)
 self.attention = Attention(hidden_size*2, maxlen)
 self.linear = nn.Linear(hidden_size*2, 16)
 self.relu = nn.ReLU()
self.dropout = nn.Dropout(0.1)
 self.out = nn.Linear(16, 1)
 def forward(self, x):
h_embedding = self.embedding(x)
 h_embedding = torch.squeeze(self.embedding_dropout(torch.unsqueeze(h_embedding, 0)))
 h_gru_1, _ = self.gru_1(h_embedding)
 h_gru_2, _ = self.gru_2(h_gru_1)
 h_atten = self.attention(h_gru_2)
 fc = self.relu(self.linear(h_atten))
fc = self.dropout(fc)
 out = self.out(fc)
 return out
submit.Label =model.predict_classes(test )<save_to_csv>
class NeuralNet2(nn.Module):
def __init__(self):
super(NeuralNet2, self ).__init__()
hidden_size = 40
self.embedding = nn.Embedding(max_features, embed_size)
 self.embedding.weight = nn.Parameter(torch.tensor(embedding_matrix, dtype=torch.float32))
self.embedding.weight.requires_grad = False
self.embedding_dropout = nn.Dropout2d(0.1)
 self.lstm = nn.LSTM(embed_size, hidden_size, bidirectional=True, batch_first=True)
 self.attention = Attention(hidden_size*2, maxlen)
 self.linear = nn.Linear(hidden_size*6, 16)
 self.relu = nn.ReLU()
self.dropout = nn.Dropout(0.1)
 self.out = nn.Linear(16, 1)
 def forward(self, x):
h_embedding = self.embedding(x)
 h_embedding = torch.squeeze(self.embedding_dropout(torch.unsqueeze(h_embedding, 0)))
 h_lstm, _ = self.lstm(h_embedding)
 h_atten = self.attention(h_lstm)
 avg_pool = torch.mean(h_lstm, 1)
 max_pool, _ = torch.max(h_lstm, 1)
 conc = torch.cat(( h_atten, avg_pool, max_pool), 1)
 fc = self.relu(self.linear(conc))
fc = self.dropout(fc)
 out = self.out(fc)
 return out
submit.head()
submit.to_csv('submit.csv',index=False )<set_options>
class NeuralNet3(nn.Module):
def __init__(self):
super(NeuralNet3, self ).__init__()
hidden_size = 40
self.embedding = nn.Embedding(max_features, embed_size)
 self.embedding.weight = nn.Parameter(torch.tensor(embedding_matrix, dtype=torch.float32))
self.embedding.weight.requires_grad = False
self.embedding_dropout = nn.Dropout2d(0.1)
 self.lstm = nn.LSTM(embed_size, hidden_size, bidirectional=True, batch_first=True)
 self.gru = nn.GRU(hidden_size*2, hidden_size, bidirectional=True, batch_first=True)
 self.lstm_attention = Attention(hidden_size*2, maxlen)
 self.gru_attention = Attention(hidden_size*2, maxlen)
 self.linear = nn.Linear(hidden_size*8, 16)
 self.relu = nn.ReLU()
self.dropout = nn.Dropout(0.1)
 self.out = nn.Linear(16, 1)
 def forward(self, x):
h_embedding = self.embedding(x)
 h_embedding = torch.squeeze(self.embedding_dropout(torch.unsqueeze(h_embedding, 0)))
 h_lstm, _ = self.lstm(h_embedding)
 h_gru, _ = self.gru(h_lstm)
 h_lstm_atten = self.lstm_attention(h_lstm)
 h_gru_atten = self.gru_attention(h_gru)
 avg_pool = torch.mean(h_gru, 1)
 max_pool, _ = torch.max(h_gru, 1)
 conc = torch.cat(( h_lstm_atten, h_gru_atten, avg_pool, max_pool), 1)
 conc = self.relu(self.linear(conc))
conc = self.dropout(conc)
 out = self.out(conc)
 return out
%matplotlib inline
warnings.filterwarnings("ignore")
 sns.set(style="white", font_scale=1.2)
<load_from_csv>
splits = list(StratifiedKFold(n_splits=n_splits, shuffle=True, random_state=SEED ).split(train_X, train_y))
df_train = pd.read_csv('.. /input/titanic/train.csv')
 df_test = pd.read_csv('.. /input/titanic/test.csv' )<import_modules>
train_preds = np.zeros(( len(train_X)))
 test_preds = np.zeros(( len(test_X)))
 for i,(train_idx, valid_idx)in enumerate(splits):
x_train = torch.tensor(train_X[train_idx], dtype=torch.long ).cuda()
y_train = torch.tensor(train_y[train_idx, np.newaxis], dtype=torch.float32 ).cuda()
x_val = torch.tensor(train_X[valid_idx], dtype=torch.long ).cuda()
y_val = torch.tensor(train_y[valid_idx, np.newaxis], dtype=torch.float32 ).cuda()
model = NeuralNet1()
valid_pred, test_pred = train_pred(model, x_train, y_train, x_val, y_val, epochs=train_epochs)
 train_preds[valid_idx] += valid_pred.reshape(-1)
 test_preds += test_pred.reshape(-1)/ len(splits)
 model = NeuralNet2()
valid_pred, test_pred = train_pred(model, x_train, y_train, x_val, y_val, epochs=train_epochs)
 train_preds[valid_idx] += valid_pred.reshape(-1)
 test_preds += test_pred.reshape(-1)/ len(splits)
 model = NeuralNet3()
valid_pred, test_pred = train_pred(model, x_train, y_train, x_val, y_val, epochs=train_epochs)
 train_preds[valid_idx] += valid_pred.reshape(-1)
 test_preds += test_pred.reshape(-1)/ len(splits )
<count_missing_values>
search_result = threshold_search(train_y, train_preds)
 print(search_result )
df_train.isnull().sum()<count_missing_values>
sub = pd.read_csv('.. /input/sample_submission.csv')
 sub.prediction = test_preds > search_result['threshold']
sub.to_csv("submission.csv", index=False )
<count_missing_values><EOS> 
g = sub.groupby("prediction" ).size()
g[1] / g[0]