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update README

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@@ -43,5 +43,3 @@ Extract those files in `pdbbind/data`
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  Run the script `pdbbind.py` in a compute job on an MPI-enabled cluster
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  (e.g., `mpirun -n 64 pdbbind.py`).
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-
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- Perform the steps in the notebook `pdbbind.ipynb`
 
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  Run the script `pdbbind.py` in a compute job on an MPI-enabled cluster
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  (e.g., `mpirun -n 64 pdbbind.py`).