NPROCS=$1 | |
MIRRORDIR=pdb # your top level rsync directory | |
RSYNC=rsync # location of local rsync | |
SERVER=rsync.wwpdb.org::ftp # RCSB PDB server name | |
PORT=33444 # port RCSB PDB server is using | |
# get file list, remove first and last 3 lines from output (double-check that these lines are not needed) | |
${RSYNC} -lpt -v -z --delete --port=$PORT --no-h --list-only ${SERVER}/data/structures/divided/pdb/ | cut -c 44- | head -n -3 | tail -n +3 > dirlist.txt | |
cat dirlist.txt | xargs -n1 -P${NPROCS} -I% rsync -rlpt -v -z --port=$PORT -P ${SERVER}/data/structures/divided/pdb/% $MIRRORDIR | |
rm dirlist.txt | |