egrace479 commited on
Commit
58967d3
1 Parent(s): 02fe551

Add metadata files (figures and data source citations)

Browse files
metadata/data-bib.bib ADDED
@@ -0,0 +1,92 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ @dataset{inhs,
2
+ title ={INHS collections data} ,
3
+ journal ={http://biocoll.inhs.illinois.edu/portal/index.php} ,
4
+ year ={2022}
5
+ }
6
+
7
+ @article{jfbm,
8
+ title ={JFBM Bell Atlas} ,
9
+ journal = {http://bellatlas.umn.edu/index.php} ,
10
+ year = 2022
11
+ }
12
+
13
+ @article{ummz,
14
+ title ={UMMZ University of Michigan Museum of Zoology, Division of Fishes},
15
+ journal = {https://ipt.lsa.umich.edu/resource?r=ummz\_fish}
16
+ }
17
+
18
+ @article{umadison,
19
+ title ={University of Wisconsin-Madison Zoological Museum - Fish} ,
20
+ journal ={http://zoology.wisc.edu/uwzm/}
21
+ }
22
+
23
+ @article{fmnh,
24
+ title ={FMNH Field Museum of Natural History (Zoology) Fish Collection} ,
25
+ journal ={Field Museum. https://fmipt.fieldmuseum.org/ipt/resource?r=fmnh_fishes}
26
+ }
27
+
28
+ @article{osum,
29
+ author ={Daly M, Johnson N} ,
30
+ title ={Ohio State University Fish Division (OSUM)} ,
31
+ journal ={Museum of Biological Diversity, The Ohio State University. Occurrence dataset, https://doi.org/10.15468/subsl8},
32
+ year = 2018
33
+ }
34
+
35
+ @article{fishair,
36
+ title ={Multimedia of Fish Specimen and associated metadata. Fish-AIR},
37
+ journal ={Biology guided Neural Network. Tulane University Biodiversity Research Institute (https://fishair.org).}
38
+ }
39
+
40
+ @article{Morphbank,
41
+ title ={Morphbank: Biological Imaging (https://www.morphbank.net/)} ,
42
+ journal ={Florida State University, Department of Scientific Computing, Tallahassee, FL 32306-4026 USA.}
43
+ }
44
+ @article{glin,
45
+ title ={Great Lakes Invasives Network Project},
46
+ journal = {https://greatlakesinvasives.org/portal/index.php}
47
+ }
48
+
49
+ @article{IDigBio,
50
+ title ={iDigBio } ,
51
+ journal ={http://www.idigbio.org/portal},
52
+ year = {2020}
53
+ }
54
+
55
+ @incollection{mabee2018phenoscape,
56
+ title={Phenoscape: semantic analysis of organismal traits and genes yields insights in evolutionary biology},
57
+ author={Mabee, Paula M and Dahdul, Wasila M and Balhoff, James P and Lapp, Hilmar and Manda, Prashanti and Uyeda, Josef and Vision, Todd and Westerfield, Monte},
58
+ booktitle={Application of Semantic Technology in Biodiversity Science},
59
+ pages={207--224},
60
+ year={2018},
61
+ publisher={IOS Press}
62
+ }
63
+
64
+ @online{fishbase,
65
+ author = {Froese, R. and Pauly, D.},
66
+ title = {FishBase},
67
+ year = {2024},
68
+ note = {World Wide Web electronic publication. Version 02/2024},
69
+ url = {http://www.fishbase.org}
70
+ }
71
+
72
+ @article{edmunds2015phenoscape,
73
+ title={Phenoscape: identifying candidate genes for evolutionary phenotypes},
74
+ author={Edmunds, Richard C and Su, Baofeng and Balhoff, James P and Eames, B Frank and Dahdul, Wasila M and Lapp, Hilmar and Lundberg, John G and Vision, Todd J and Dunham, Rex A and Mabee, Paula M and others},
75
+ journal={Molecular Biology and Evolution},
76
+ volume={33},
77
+ number={1},
78
+ pages={13--24},
79
+ year={2015},
80
+ publisher={Society for Molecular Biology and Evolution}
81
+ }
82
+
83
+ @article{mabee2012500,
84
+ title={500,000 fish phenotypes: The new informatics landscape for evolutionary and developmental biology of the vertebrate skeleton},
85
+ author={Mabee, Paula and Balhoff, James P and Dahdul, Wasila M and Lapp, Hilmar and Midford, Peter E and Vision, Todd J and Westerfield, Monte},
86
+ journal={Journal of Applied Ichthyology},
87
+ volume={28},
88
+ number={3},
89
+ pages={300--305},
90
+ year={2012},
91
+ publisher={Wiley Online Library}
92
+ }
metadata/figures/DataProcessingPipelineFishVista.png ADDED

Git LFS Details

  • SHA256: 500a49b04c0ad48dd04b7b62f2b5c75a5ed7a945e84fe80d1be9b5cd13f90c7e
  • Pointer size: 132 Bytes
  • Size of remote file: 2.41 MB
metadata/figures/FishVista.pdf ADDED
Binary file (852 kB). View file
 
metadata/figures/FishVista.png ADDED

Git LFS Details

  • SHA256: 021266576401822b32b3a870a629bff69a9f0c1dc31cbc703b3f45c3f3ce66b2
  • Pointer size: 132 Bytes
  • Size of remote file: 3.67 MB
metadata/figures/IdentificationOriginalResults.pdf ADDED
Binary file (19.1 kB). View file
 
metadata/figures/IdentificationOriginalResults.png ADDED

Git LFS Details

  • SHA256: c5d927d2b9de466937c21988b8a6ad5532b94201c52427b48b6e29f32618c24b
  • Pointer size: 132 Bytes
  • Size of remote file: 1.11 MB
metadata/figures/clf_imbalance.pdf ADDED
Binary file (16.4 kB). View file
 
metadata/figures/clf_imbalance.png ADDED

Git LFS Details

  • SHA256: ad0daf9aa5ec516c8ff02a6321f5df1a3f9cbff347cad5ec099f3348ddcc8cec
  • Pointer size: 131 Bytes
  • Size of remote file: 365 kB