| :github_url: https://github.com/Project-MONAI/MONAI | |
| .. _transform_api: | |
| Transforms | |
| ========== | |
| Generic Interfaces | |
| ------------------ | |
| .. automodule:: monai.transforms | |
| .. currentmodule:: monai.transforms | |
| `Transform` | |
| ^^^^^^^^^^^ | |
| .. autoclass:: Transform | |
| :members: | |
| :special-members: __call__ | |
| `MapTransform` | |
| ^^^^^^^^^^^^^^ | |
| .. autoclass:: MapTransform | |
| :members: | |
| :special-members: __call__ | |
| `Randomizable` | |
| ^^^^^^^^^^^^^^ | |
| .. autoclass:: Randomizable | |
| :members: | |
| `Compose` | |
| ^^^^^^^^^ | |
| .. autoclass:: Compose | |
| :members: | |
| :special-members: __call__ | |
| Vanilla Transforms | |
| ------------------ | |
| Crop and Pad | |
| ^^^^^^^^^^^^ | |
| `SpatialPad` | |
| """""""""""" | |
| .. autoclass:: SpatialPad | |
| :members: | |
| :special-members: __call__ | |
| `BorderPad` | |
| """"""""""" | |
| .. autoclass:: BorderPad | |
| :members: | |
| :special-members: __call__ | |
| `DivisiblePad` | |
| """""""""""""" | |
| .. autoclass:: DivisiblePad | |
| :members: | |
| :special-members: __call__ | |
| `SpatialCrop` | |
| """"""""""""" | |
| .. autoclass:: SpatialCrop | |
| :members: | |
| :special-members: __call__ | |
| `CenterSpatialCrop` | |
| """"""""""""""""""" | |
| .. autoclass:: CenterSpatialCrop | |
| :members: | |
| :special-members: __call__ | |
| `RandSpatialCrop` | |
| """"""""""""""""" | |
| .. autoclass:: RandSpatialCrop | |
| :members: | |
| :special-members: __call__ | |
| `RandSpatialCropSamples` | |
| """""""""""""""""""""""" | |
| .. autoclass:: RandSpatialCropSamples | |
| :members: | |
| :special-members: __call__ | |
| `CropForeground` | |
| """""""""""""""" | |
| .. autoclass:: CropForeground | |
| :members: | |
| :special-members: __call__ | |
| `RandCropByPosNegLabel` | |
| """"""""""""""""""""""" | |
| .. autoclass:: RandCropByPosNegLabel | |
| :members: | |
| :special-members: __call__ | |
| Intensity | |
| ^^^^^^^^^ | |
| `RandGaussianNoise` | |
| """"""""""""""""""" | |
| .. autoclass:: RandGaussianNoise | |
| :members: | |
| :special-members: __call__ | |
| `ShiftIntensity` | |
| """""""""""""""" | |
| .. autoclass:: ShiftIntensity | |
| :members: | |
| :special-members: __call__ | |
| `RandShiftIntensity` | |
| """""""""""""""""""" | |
| .. autoclass:: RandShiftIntensity | |
| :members: | |
| :special-members: __call__ | |
| `ScaleIntensity` | |
| """""""""""""""" | |
| .. autoclass:: ScaleIntensity | |
| :members: | |
| :special-members: __call__ | |
| `RandScaleIntensity` | |
| """""""""""""""""""" | |
| .. autoclass:: RandScaleIntensity | |
| :members: | |
| :special-members: __call__ | |
| `NormalizeIntensity` | |
| """""""""""""""""""" | |
| .. autoclass:: NormalizeIntensity | |
| :members: | |
| :special-members: __call__ | |
| `ThresholdIntensity` | |
| """""""""""""""""""" | |
| .. autoclass:: ThresholdIntensity | |
| :members: | |
| :special-members: __call__ | |
| `ScaleIntensityRange` | |
| """"""""""""""""""""" | |
| .. autoclass:: ScaleIntensityRange | |
| :members: | |
| :special-members: __call__ | |
| `ScaleIntensityRangePercentiles` | |
| """""""""""""""""""""""""""""""" | |
| .. autoclass:: ScaleIntensityRangePercentiles | |
| :members: | |
| :special-members: __call__ | |
| `AdjustContrast` | |
| """""""""""""""" | |
| .. autoclass:: AdjustContrast | |
| :members: | |
| :special-members: __call__ | |
| `RandAdjustContrast` | |
| """""""""""""""""""" | |
| .. autoclass:: RandAdjustContrast | |
| :members: | |
| :special-members: __call__ | |
| `MaskIntensity` | |
| """"""""""""""" | |
| .. autoclass:: MaskIntensity | |
| :members: | |
| :special-members: __call__ | |
| `GaussianSmooth` | |
| """""""""""""""" | |
| .. autoclass:: GaussianSmooth | |
| :members: | |
| :special-members: __call__ | |
| `RandGaussianSmooth` | |
| """""""""""""""""""" | |
| .. autoclass:: RandGaussianSmooth | |
| :members: | |
| :special-members: __call__ | |
| `GaussianSharpen` | |
| """"""""""""""""" | |
| .. autoclass:: GaussianSharpen | |
| :members: | |
| :special-members: __call__ | |
| `RandGaussianSharpen` | |
| """"""""""""""""""""" | |
| .. autoclass:: RandGaussianSharpen | |
| :members: | |
| :special-members: __call__ | |
| IO | |
| ^^ | |
| `LoadImage` | |
| """"""""""" | |
| .. autoclass:: LoadImage | |
| :members: | |
| :special-members: __call__ | |
| `LoadNifti` | |
| """"""""""" | |
| .. autoclass:: LoadNifti | |
| :members: | |
| :special-members: __call__ | |
| `LoadPNG` | |
| """"""""" | |
| .. autoclass:: LoadPNG | |
| :members: | |
| :special-members: __call__ | |
| `LoadNumpy` | |
| """"""""""" | |
| .. autoclass:: LoadNumpy | |
| :members: | |
| :special-members: __call__ | |
| Post-processing | |
| ^^^^^^^^^^^^^^^ | |
| `SplitChannel` | |
| """""""""""""" | |
| .. autoclass:: SplitChannel | |
| :members: | |
| :special-members: __call__ | |
| `Activations` | |
| """"""""""""" | |
| .. autoclass:: Activations | |
| :members: | |
| :special-members: __call__ | |
| `AsDiscrete` | |
| """""""""""" | |
| .. autoclass:: AsDiscrete | |
| :members: | |
| :special-members: __call__ | |
| `KeepLargestConnectedComponent` | |
| """"""""""""""""""""""""""""""" | |
| .. autoclass:: KeepLargestConnectedComponent | |
| :members: | |
| :special-members: __call__ | |
| `LabelToContour` | |
| """""""""""""""" | |
| .. autoclass:: LabelToContour | |
| :members: | |
| :special-members: __call__ | |
| `MeanEnsemble` | |
| """""""""""""" | |
| .. autoclass:: MeanEnsemble | |
| :members: | |
| :special-members: __call__ | |
| `VoteEnsemble` | |
| """""""""""""" | |
| .. autoclass:: VoteEnsemble | |
| :members: | |
| :special-members: __call__ | |
| Spatial | |
| ^^^^^^^ | |
| `Spacing` | |
| """"""""" | |
| .. autoclass:: Spacing | |
| :members: | |
| :special-members: __call__ | |
| `Orientation` | |
| """"""""""""" | |
| .. autoclass:: Orientation | |
| :members: | |
| :special-members: __call__ | |
| `RandRotate` | |
| """""""""""" | |
| .. autoclass:: RandRotate | |
| :members: | |
| :special-members: __call__ | |
| `RandFlip` | |
| """""""""" | |
| .. autoclass:: RandFlip | |
| :members: | |
| :special-members: __call__ | |
| `RandZoom` | |
| """""""""" | |
| .. autoclass:: RandZoom | |
| :members: | |
| :special-members: __call__ | |
| `Affine` | |
| """""""" | |
| .. autoclass:: Affine | |
| :members: | |
| :special-members: __call__ | |
| `Resample` | |
| """""""""" | |
| .. autoclass:: Resample | |
| :members: | |
| :special-members: __call__ | |
| `RandAffine` | |
| """""""""""" | |
| .. autoclass:: RandAffine | |
| :members: | |
| :special-members: __call__ | |
| `RandDeformGrid` | |
| """""""""""""""" | |
| .. autoclass:: RandDeformGrid | |
| :members: | |
| :special-members: __call__ | |
| `AffineGrid` | |
| """""""""""""""" | |
| .. autoclass:: AffineGrid | |
| :members: | |
| :special-members: __call__ | |
| `RandAffineGrid` | |
| """""""""""""""" | |
| .. autoclass:: RandAffineGrid | |
| :members: | |
| :special-members: __call__ | |
| `Rand2DElastic` | |
| """"""""""""""" | |
| .. autoclass:: Rand2DElastic | |
| :members: | |
| :special-members: __call__ | |
| `Rand3DElastic` | |
| """"""""""""""" | |
| .. autoclass:: Rand3DElastic | |
| :members: | |
| :special-members: __call__ | |
| `Rotate90` | |
| """""""""" | |
| .. autoclass:: Rotate90 | |
| :members: | |
| :special-members: __call__ | |
| `RandRotate90` | |
| """""""""""""" | |
| .. autoclass:: RandRotate90 | |
| :members: | |
| :special-members: __call__ | |
| `Flip` | |
| """""" | |
| .. autoclass:: Flip | |
| :members: | |
| :special-members: __call__ | |
| `Resize` | |
| """""""" | |
| .. autoclass:: Resize | |
| :members: | |
| :special-members: __call__ | |
| `Rotate` | |
| """""""" | |
| .. autoclass:: Rotate | |
| :members: | |
| :special-members: __call__ | |
| `Zoom` | |
| """""" | |
| .. autoclass:: Zoom | |
| :members: | |
| :special-members: __call__ | |
| Utility | |
| ^^^^^^^ | |
| `Identity` | |
| """""""""" | |
| .. autoclass:: Identity | |
| :members: | |
| :special-members: __call__ | |
| `AsChannelFirst` | |
| """""""""""""""" | |
| .. autoclass:: AsChannelFirst | |
| :members: | |
| :special-members: __call__ | |
| `AsChannelLast` | |
| """"""""""""""" | |
| .. autoclass:: AsChannelLast | |
| :members: | |
| :special-members: __call__ | |
| `AddChannel` | |
| """""""""""" | |
| .. autoclass:: AddChannel | |
| :members: | |
| :special-members: __call__ | |
| `RepeatChannel` | |
| """"""""""""""" | |
| .. autoclass:: RepeatChannel | |
| :members: | |
| :special-members: __call__ | |
| `CastToType` | |
| """""""""""" | |
| .. autoclass:: CastToType | |
| :members: | |
| :special-members: __call__ | |
| `ToTensor` | |
| """""""""" | |
| .. autoclass:: ToTensor | |
| :members: | |
| :special-members: __call__ | |
| `ToNumpy` | |
| """"""""" | |
| .. autoclass:: ToNumpy | |
| :members: | |
| :special-members: __call__ | |
| `Transpose` | |
| """"""""""" | |
| .. autoclass:: Transpose | |
| :members: | |
| :special-members: __call__ | |
| `SqueezeDim` | |
| """""""""""" | |
| .. autoclass:: SqueezeDim | |
| :members: | |
| :special-members: __call__ | |
| `DataStats` | |
| """"""""""" | |
| .. autoclass:: DataStats | |
| :members: | |
| :special-members: __call__ | |
| `SimulateDelay` | |
| """"""""""""""" | |
| .. autoclass:: SimulateDelay | |
| :members: | |
| :special-members: __call__ | |
| `Lambda` | |
| """""""" | |
| .. autoclass:: Lambda | |
| :members: | |
| :special-members: __call__ | |
| `LabelToMask` | |
| """"""""""""" | |
| .. autoclass:: LabelToMask | |
| :members: | |
| :special-members: __call__ | |
| `FgBgToIndices` | |
| """"""""""""""" | |
| .. autoclass:: FgBgToIndices | |
| :members: | |
| :special-members: __call__ | |
| Dictionary Transforms | |
| --------------------- | |
| Crop and Pad (Dict) | |
| ^^^^^^^^^^^^^^^^^^^ | |
| `SpatialPadd` | |
| """"""""""""" | |
| .. autoclass:: SpatialPadd | |
| :members: | |
| :special-members: __call__ | |
| `BorderPadd` | |
| """""""""""" | |
| .. autoclass:: BorderPadd | |
| :members: | |
| :special-members: __call__ | |
| `DivisiblePadd` | |
| """"""""""""""" | |
| .. autoclass:: DivisiblePadd | |
| :members: | |
| :special-members: __call__ | |
| `SpatialCropd` | |
| """""""""""""" | |
| .. autoclass:: SpatialCropd | |
| :members: | |
| :special-members: __call__ | |
| `CenterSpatialCropd` | |
| """""""""""""""""""" | |
| .. autoclass:: CenterSpatialCropd | |
| :members: | |
| :special-members: __call__ | |
| `RandSpatialCropd` | |
| """""""""""""""""" | |
| .. autoclass:: RandSpatialCropd | |
| :members: | |
| :special-members: __call__ | |
| `RandSpatialCropSamplesd` | |
| """"""""""""""""""""""""" | |
| .. autoclass:: RandSpatialCropSamplesd | |
| :members: | |
| :special-members: __call__ | |
| `CropForegroundd` | |
| """"""""""""""""" | |
| .. autoclass:: CropForegroundd | |
| :members: | |
| :special-members: __call__ | |
| `RandCropByPosNegLabeld` | |
| """""""""""""""""""""""" | |
| .. autoclass:: RandCropByPosNegLabeld | |
| :members: | |
| :special-members: __call__ | |
| Instensity (Dict) | |
| ^^^^^^^^^^^^^^^^^ | |
| `RandGaussianNoised` | |
| """""""""""""""""""" | |
| .. autoclass:: RandGaussianNoised | |
| :members: | |
| :special-members: __call__ | |
| `ShiftIntensityd` | |
| """"""""""""""""" | |
| .. autoclass:: ShiftIntensityd | |
| :members: | |
| :special-members: __call__ | |
| `RandShiftIntensityd` | |
| """"""""""""""""""""" | |
| .. autoclass:: RandShiftIntensityd | |
| :members: | |
| :special-members: __call__ | |
| `ScaleIntensityd` | |
| """"""""""""""""" | |
| .. autoclass:: ScaleIntensityd | |
| :members: | |
| :special-members: __call__ | |
| `RandScaleIntensityd` | |
| """"""""""""""""""""" | |
| .. autoclass:: RandScaleIntensityd | |
| :members: | |
| :special-members: __call__ | |
| `NormalizeIntensityd` | |
| """"""""""""""""""""" | |
| .. autoclass:: NormalizeIntensityd | |
| :members: | |
| :special-members: __call__ | |
| `ThresholdIntensityd` | |
| """"""""""""""""""""" | |
| .. autoclass:: ThresholdIntensityd | |
| :members: | |
| :special-members: __call__ | |
| `ScaleIntensityRanged` | |
| """""""""""""""""""""" | |
| .. autoclass:: ScaleIntensityRanged | |
| :members: | |
| :special-members: __call__ | |
| `ScaleIntensityRangePercentilesd` | |
| """"""""""""""""""""""""""""""""" | |
| .. autoclass:: ScaleIntensityRangePercentilesd | |
| :members: | |
| :special-members: __call__ | |
| `AdjustContrastd` | |
| """"""""""""""""" | |
| .. autoclass:: AdjustContrastd | |
| :members: | |
| :special-members: __call__ | |
| `RandAdjustContrastd` | |
| """"""""""""""""""""" | |
| .. autoclass:: RandAdjustContrastd | |
| :members: | |
| :special-members: __call__ | |
| `MaskIntensityd` | |
| """""""""""""""" | |
| .. autoclass:: MaskIntensityd | |
| :members: | |
| :special-members: __call__ | |
| `GaussianSmoothd` | |
| """"""""""""""""" | |
| .. autoclass:: GaussianSmoothd | |
| :members: | |
| :special-members: __call__ | |
| `RandGaussianSmoothd` | |
| """"""""""""""""""""" | |
| .. autoclass:: RandGaussianSmoothd | |
| :members: | |
| :special-members: __call__ | |
| `GaussianSharpend` | |
| """""""""""""""""" | |
| .. autoclass:: GaussianSharpend | |
| :members: | |
| :special-members: __call__ | |
| `RandGaussianSharpend` | |
| """""""""""""""""""""" | |
| .. autoclass:: RandGaussianSharpend | |
| :members: | |
| :special-members: __call__ | |
| IO (Dict) | |
| ^^^^^^^^^ | |
| `LoadDatad` | |
| """"""""""" | |
| .. autoclass:: LoadDatad | |
| :members: | |
| :special-members: __call__ | |
| `LoadImaged` | |
| """""""""""" | |
| .. autoclass:: LoadImaged | |
| :members: | |
| :special-members: __call__ | |
| `LoadNiftid` | |
| """""""""""" | |
| .. autoclass:: LoadNiftid | |
| :members: | |
| :special-members: __call__ | |
| `LoadPNGd` | |
| """""""""" | |
| .. autoclass:: LoadPNGd | |
| :members: | |
| :special-members: __call__ | |
| `LoadNumpyd` | |
| """""""""""" | |
| .. autoclass:: LoadNumpyd | |
| :members: | |
| :special-members: __call__ | |
| Post-processing (Dict) | |
| ^^^^^^^^^^^^^^^^^^^^^^ | |
| `SplitChanneld` | |
| """"""""""""""" | |
| .. autoclass:: SplitChanneld | |
| :members: | |
| :special-members: __call__ | |
| `Activationsd` | |
| """""""""""""" | |
| .. autoclass:: Activationsd | |
| :members: | |
| :special-members: __call__ | |
| `AsDiscreted` | |
| """"""""""""" | |
| .. autoclass:: AsDiscreted | |
| :members: | |
| :special-members: __call__ | |
| `KeepLargestConnectedComponentd` | |
| """""""""""""""""""""""""""""""" | |
| .. autoclass:: KeepLargestConnectedComponentd | |
| :members: | |
| :special-members: __call__ | |
| `LabelToContourd` | |
| """"""""""""""""" | |
| .. autoclass:: LabelToContourd | |
| :members: | |
| :special-members: __call__ | |
| `Ensembled` | |
| """"""""""" | |
| .. autoclass:: Ensembled | |
| :members: | |
| :special-members: __call__ | |
| `MeanEnsembled` | |
| """"""""""""""" | |
| .. autoclass:: MeanEnsembled | |
| :members: | |
| :special-members: __call__ | |
| `VoteEnsembled` | |
| """"""""""""""" | |
| .. autoclass:: VoteEnsembled | |
| :members: | |
| :special-members: __call__ | |
| Spatial (Dict) | |
| ^^^^^^^^^^^^^^ | |
| `Spacingd` | |
| """""""""" | |
| .. autoclass:: Spacingd | |
| :members: | |
| :special-members: __call__ | |
| `Orientationd` | |
| """""""""""""" | |
| .. autoclass:: Orientationd | |
| :members: | |
| :special-members: __call__ | |
| `Flipd` | |
| """"""" | |
| .. autoclass:: Flipd | |
| :members: | |
| :special-members: __call__ | |
| `RandFlipd` | |
| """"""""""" | |
| .. autoclass:: RandFlipd | |
| :members: | |
| :special-members: __call__ | |
| `Rotated` | |
| """"""""" | |
| .. autoclass:: Rotated | |
| :members: | |
| :special-members: __call__ | |
| `RandRotated` | |
| """"""""""""" | |
| .. autoclass:: RandRotated | |
| :members: | |
| :special-members: __call__ | |
| `Zoomd` | |
| """"""" | |
| .. autoclass:: Zoomd | |
| :members: | |
| :special-members: __call__ | |
| `RandZoomd` | |
| """"""""""" | |
| .. autoclass:: RandZoomd | |
| :members: | |
| :special-members: __call__ | |
| `RandRotate90d` | |
| """"""""""""""" | |
| .. autoclass:: RandRotate90d | |
| :members: | |
| :special-members: __call__ | |
| `Rotate90d` | |
| """"""""""" | |
| .. autoclass:: Rotate90d | |
| :members: | |
| :special-members: __call__ | |
| `Resized` | |
| """"""""" | |
| .. autoclass:: Resized | |
| :members: | |
| :special-members: __call__ | |
| `RandAffined` | |
| """"""""""""" | |
| .. autoclass:: RandAffined | |
| :members: | |
| :special-members: __call__ | |
| `Rand2DElasticd` | |
| """""""""""""""" | |
| .. autoclass:: Rand2DElasticd | |
| :members: | |
| :special-members: __call__ | |
| `Rand3DElasticd` | |
| """""""""""""""" | |
| .. autoclass:: Rand3DElasticd | |
| :members: | |
| :special-members: __call__ | |
| Utility (Dict) | |
| ^^^^^^^^^^^^^^ | |
| `Identityd` | |
| """"""""""" | |
| .. autoclass:: Identityd | |
| :members: | |
| :special-members: __call__ | |
| `AsChannelFirstd` | |
| """"""""""""""""" | |
| .. autoclass:: AsChannelFirstd | |
| :members: | |
| :special-members: __call__ | |
| `AsChannelLastd` | |
| """""""""""""""" | |
| .. autoclass:: AsChannelLastd | |
| :members: | |
| :special-members: __call__ | |
| `AddChanneld` | |
| """"""""""""" | |
| .. autoclass:: AddChanneld | |
| :members: | |
| :special-members: __call__ | |
| `RepeatChanneld` | |
| """""""""""""""" | |
| .. autoclass:: RepeatChanneld | |
| :members: | |
| :special-members: __call__ | |
| `CastToTyped` | |
| """"""""""""" | |
| .. autoclass:: CastToTyped | |
| :members: | |
| :special-members: __call__ | |
| `ToTensord` | |
| """"""""""" | |
| .. autoclass:: ToTensord | |
| :members: | |
| :special-members: __call__ | |
| `ToNumpyd` | |
| """""""""" | |
| .. autoclass:: ToNumpyd | |
| :members: | |
| :special-members: __call__ | |
| `DeleteItemsd` | |
| """""""""""""" | |
| .. autoclass:: DeleteItemsd | |
| :members: | |
| :special-members: __call__ | |
| `SqueezeDimd` | |
| """"""""""""" | |
| .. autoclass:: SqueezeDimd | |
| :members: | |
| :special-members: __call__ | |
| `DataStatsd` | |
| """""""""""" | |
| .. autoclass:: DataStatsd | |
| :members: | |
| :special-members: __call__ | |
| `SimulateDelayd` | |
| """""""""""""""" | |
| .. autoclass:: SimulateDelayd | |
| :members: | |
| :special-members: __call__ | |
| `CopyItemsd` | |
| """""""""""" | |
| .. autoclass:: CopyItemsd | |
| :members: | |
| :special-members: __call__ | |
| `ConcatItemsd` | |
| """""""""""""" | |
| .. autoclass:: ConcatItemsd | |
| :members: | |
| :special-members: __call__ | |
| `Lambdad` | |
| """"""""" | |
| .. autoclass:: Lambdad | |
| :members: | |
| :special-members: __call__ | |
| `LabelToMaskd` | |
| """""""""""""" | |
| .. autoclass:: LabelToMaskd | |
| :members: | |
| :special-members: __call__ | |
| `FgBgToIndicesd` | |
| """""""""""""""" | |
| .. autoclass:: FgBgToIndicesd | |
| :members: | |
| :special-members: __call__ | |
| Transform Adaptors | |
| ------------------ | |
| .. automodule:: monai.transforms.adaptors | |
| `adaptor` | |
| ^^^^^^^^^ | |
| .. autofunction:: monai.transforms.adaptors.adaptor | |
| `apply_alias` | |
| ^^^^^^^^^^^^^ | |
| .. autofunction:: monai.transforms.adaptors.apply_alias | |
| `to_kwargs` | |
| ^^^^^^^^^^^ | |
| .. autofunction:: monai.transforms.adaptors.to_kwargs | |
| Utilities | |
| --------- | |
| .. automodule:: monai.transforms.utils | |
| :members: | |