ethan1115 commited on
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a1e9dc3
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train/SB/SA7/config/config_sacfm.py CHANGED
@@ -26,7 +26,7 @@ class SACFMConfig:
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  noise_type: str = "Gaussian"
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  print_every: int = 5000
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  mode: str = "predict_y"
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- result_path: str = "/home/hp250092/ku50001222/qian/aivc/lfj/GRN/result/sacfm"
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  fusion_method: str = "differential_perceiver"
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  infer_top_gene: int = 1000
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  n_top_genes: int = 5000
 
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  noise_type: str = "Gaussian"
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  print_every: int = 5000
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  mode: str = "predict_y"
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+ result_path: str = "./result"
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  fusion_method: str = "differential_perceiver"
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  infer_top_gene: int = 1000
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  n_top_genes: int = 5000
train/SB/SA7/run_sacfm.sh CHANGED
@@ -7,8 +7,12 @@
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  export PYTORCH_CUDA_ALLOC_CONF=max_split_size_mb:256
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- source /home/hp250092/ku50001222/qian/aivc/lfj/stack_env/bin/activate
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- cd /home/hp250092/ku50001222/qian/aivc/lfj/GRN/grn_sacfm
 
 
 
 
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  python scripts/run_sacfm.py \
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  --d-model 128 \
@@ -36,5 +40,5 @@ python scripts/run_sacfm.py \
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  --ode-steps 20 \
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  --sigma-scale 0.3 \
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  --gene-weight-alpha 2.0 \
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- --result-path /home/hp250092/ku50001222/qian/aivc/lfj/GRN/result/sacfm \
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  --exp-name sacfm_ss03_gw2
 
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  export PYTORCH_CUDA_ALLOC_CONF=max_split_size_mb:256
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+ # Auto-detect paths: grn_sacfm/ -> GRN/ -> lfj/
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+ SCRIPT_DIR="$(cd "$(dirname "$0")" && pwd)"
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+ LFJ_ROOT="$(cd "$SCRIPT_DIR/../.." && pwd)"
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+
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+ source "$LFJ_ROOT/stack_env/bin/activate"
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+ cd "$SCRIPT_DIR"
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  python scripts/run_sacfm.py \
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  --d-model 128 \
 
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  --ode-steps 20 \
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  --sigma-scale 0.3 \
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  --gene-weight-alpha 2.0 \
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+ --result-path "$LFJ_ROOT/GRN/result/sacfm" \
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  --exp-name sacfm_ss03_gw2