Complex sentence: Carter and O'Neill will pilot an F-302, equipped with hyperspace-burst capability, that will go through the shields of Anubis' ship to fire missiles down a ventilation duct to the power core of the super-weapon.
Split into simpler sentences: Carter and O'Neill will pilot an F-302, equipped with hyperspace-burst capability, and penetrate the shields of Anubis' ship. In turn, this will allow them to fire missiles down a ventilation duct to the power core of the super-weapon.