Complex sentence: The baseline will identify what is "normal" for that network--what sort of bandwidth is generally used, what protocols are used that it may raise a False Positive alarm for a legitimate use of bandwidth if the baselines are not intelligently configured.
Split into simpler sentences: The baseline will identify what is "normal" for that network--what sort of bandwidth is generally used and what protocols are used. It may however, raise a False Positive alarm for legitimate use of bandwidth if the baselines are not intelligently configured.