DarthReca commited on
Commit
7d4633f
1 Parent(s): 611bf7b

:new: Added loader

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Files changed (1) hide show
  1. loader.py +33 -0
loader.py ADDED
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+ from typing import List, Tuple
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+
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+ import h5py
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+ import numpy as np
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+
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+
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+ def loader(
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+ hdf5_file: str, folds: List[int]
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+ ) -> Tuple[np.ndarray, np.ndarray, np.ndarray, List[str]]:
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+ post = []
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+ pre = []
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+ masks = []
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+ names = []
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+
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+ # Read hdf5 file and filter by fold
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+ with h5py.File(hdf5_file, "r") as f:
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+ for uuid, values in f.items():
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+ if values.attrs["fold"] not in folds:
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+ continue
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+ if "pre_fire" not in values:
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+ continue
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+
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+ post.append(values["post_fire"][...])
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+ pre.append(values["pre_fire"][...])
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+ masks.append(values["mask"][...])
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+ names.append(uuid)
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+
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+ # Convert to numpy arrays
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+ post = np.stack(post, axis=0, dtype=np.int32)
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+ pre = np.stack(pre, axis=0, dtype=np.int32)
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+ masks = np.stack(masks, axis=0, dtype=np.int32)
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+
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+ return post, pre, masks, names