Chris Oswald
commited on
Commit
•
00ba0c6
1
Parent(s):
02961c5
minor text edits
Browse files
SPIDER.py
CHANGED
@@ -34,7 +34,9 @@ def import_csv_data(filepath: str) -> List[Dict[str, str]]:
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for line in reader:
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results.append(line)
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return results
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-
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# TODO: Add BibTeX citation
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# Find for instance the citation on arxiv or on the dataset repo/website
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@@ -159,10 +161,12 @@ class SPIDER(datasets.GeneratorBasedBuilder):
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)
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def _split_generators(self, dl_manager):
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# dl_manager is a datasets.download.DownloadManager that can be used to download and extract URLS
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# It can accept any type or nested list/dict and will give back the same structure with the url replaced with path to local files.
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@@ -172,7 +176,6 @@ class SPIDER(datasets.GeneratorBasedBuilder):
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return [
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datasets.SplitGenerator(
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name=datasets.Split.TRAIN,
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# These kwargs will be passed to _generate_examples
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gen_kwargs={
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"paths_dict": paths_dict,
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"split": "train",
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@@ -181,7 +184,6 @@ class SPIDER(datasets.GeneratorBasedBuilder):
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),
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datasets.SplitGenerator(
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name=datasets.Split.VALIDATION,
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# These kwargs will be passed to _generate_examples
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gen_kwargs={
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"paths_dict": paths_dict,
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"split": "validate",
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@@ -190,7 +192,6 @@ class SPIDER(datasets.GeneratorBasedBuilder):
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),
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datasets.SplitGenerator(
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name=datasets.Split.TEST,
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# These kwargs will be passed to _generate_examples
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gen_kwargs={
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"paths_dict": paths_dict,
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"split": "test",
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@@ -199,7 +200,6 @@ class SPIDER(datasets.GeneratorBasedBuilder):
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),
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]
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# method parameters are unpacked from `gen_kwargs` as given in `_split_generators`
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def _generate_examples(
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self,
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paths_dict: Dict[str, str],
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@@ -242,7 +242,6 @@ class SPIDER(datasets.GeneratorBasedBuilder):
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Tuple (unique patient-scan ID, dict of
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"""
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# Set constants
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-
N_PATIENTS = 257
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train_share = (1.0 - validate_share - test_share)
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np.random.seed(int(random_seed))
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for line in reader:
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results.append(line)
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return results
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+
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# Define constants
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N_PATIENTS = 257
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# TODO: Add BibTeX citation
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# Find for instance the citation on arxiv or on the dataset repo/website
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)
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def _split_generators(self, dl_manager):
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"""
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This method is tasked with downloading/extracting the data
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and defining the splits depending on the configuration
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If several configurations are possible (listed in BUILDER_CONFIGS),
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the configuration selected by the user is in self.config.name
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"""
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# dl_manager is a datasets.download.DownloadManager that can be used to download and extract URLS
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# It can accept any type or nested list/dict and will give back the same structure with the url replaced with path to local files.
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return [
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datasets.SplitGenerator(
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name=datasets.Split.TRAIN,
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gen_kwargs={
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"paths_dict": paths_dict,
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"split": "train",
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),
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datasets.SplitGenerator(
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name=datasets.Split.VALIDATION,
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gen_kwargs={
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"paths_dict": paths_dict,
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"split": "validate",
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),
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datasets.SplitGenerator(
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name=datasets.Split.TEST,
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gen_kwargs={
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"paths_dict": paths_dict,
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"split": "test",
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),
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]
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def _generate_examples(
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self,
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paths_dict: Dict[str, str],
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Tuple (unique patient-scan ID, dict of
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"""
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# Set constants
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train_share = (1.0 - validate_share - test_share)
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np.random.seed(int(random_seed))
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