gabrielaltay commited on
Commit
5383605
1 Parent(s): 1263e23

upload bigbiohub.py to hub from bigbio repo

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Files changed (1) hide show
  1. bigbiohub.py +4 -3
bigbiohub.py CHANGED
@@ -4,11 +4,12 @@ from enum import Enum
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  import logging
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  from pathlib import Path
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  from types import SimpleNamespace
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- from typing import Dict, Iterable, List, Tuple
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- import bioc
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  import datasets
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  logger = logging.getLogger(__name__)
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@@ -162,7 +163,7 @@ kb_features = datasets.Features(
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  )
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- def get_texts_and_offsets_from_bioc_ann(ann: bioc.BioCAnnotation) -> Tuple:
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  offsets = [(loc.offset, loc.offset + loc.length) for loc in ann.locations]
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  import logging
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  from pathlib import Path
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  from types import SimpleNamespace
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+ from typing import TYPE_CHECKING, Dict, Iterable, List, Tuple
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  import datasets
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+ if TYPE_CHECKING:
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+ import bioc
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  logger = logging.getLogger(__name__)
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  )
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+ def get_texts_and_offsets_from_bioc_ann(ann: "bioc.BioCAnnotation") -> Tuple:
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  offsets = [(loc.offset, loc.offset + loc.length) for loc in ann.locations]
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