gabrielaltay
commited on
Commit
•
339f827
1
Parent(s):
ab2f676
fix parsing imports
Browse files- bionlp_st_2011_ge.py +6 -3
bionlp_st_2011_ge.py
CHANGED
@@ -21,6 +21,9 @@ import datasets
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from .bigbiohub import kb_features
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from .bigbiohub import BigBioConfig
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from .bigbiohub import Tasks
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_DATASETNAME = "bionlp_st_2011_ge"
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_DISPLAYNAME = "BioNLP 2011 GE"
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@@ -248,14 +251,14 @@ class bionlp_st_2011_ge(datasets.GeneratorBasedBuilder):
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if self.config.schema == "source":
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txt_files = list(data_files.glob("*txt"))
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for guid, txt_file in enumerate(txt_files):
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-
example =
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example["id"] = str(guid)
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yield guid, example
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elif self.config.schema == "bigbio_kb":
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txt_files = list(data_files.glob("*txt"))
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for guid, txt_file in enumerate(txt_files):
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example =
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-
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)
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example = self._standardize_arguments_roles(example)
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example["id"] = str(guid)
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from .bigbiohub import kb_features
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from .bigbiohub import BigBioConfig
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from .bigbiohub import Tasks
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+
from .bigbiohub import parse_brat_file
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from .bigbiohub import brat_parse_to_bigbio_kb
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+
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_DATASETNAME = "bionlp_st_2011_ge"
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_DISPLAYNAME = "BioNLP 2011 GE"
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if self.config.schema == "source":
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txt_files = list(data_files.glob("*txt"))
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for guid, txt_file in enumerate(txt_files):
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example = parse_brat_file(txt_file)
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example["id"] = str(guid)
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yield guid, example
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elif self.config.schema == "bigbio_kb":
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txt_files = list(data_files.glob("*txt"))
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for guid, txt_file in enumerate(txt_files):
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example = brat_parse_to_bigbio_kb(
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parse_brat_file(txt_file)
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)
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example = self._standardize_arguments_roles(example)
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example["id"] = str(guid)
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