Patent SG-11201903270R-A (SG)
Title: Method and system for selective access of stored or transmitted bioinformatics data
Inventor: ZOIA GIORGIO
IPC: G16B45/00
Filed: 2017-02-14
Abstract: INTERNATIONAL APPLICATION PUBLISHED UNDER THE PATENT COOPERATION TREATY (PCT) (19) World Intellectual Property MD 11011110111010101111101 11010101110111010111100 HI MIS Organization International Bureau (10) International Publication Number (43) International Publication Date ......0\"\"\" WO 2018/071054 Al 19 April 2018 (19.04.2018) WIP0 1 PCT (51) International Patent Classification: (72) Inventors: ZOIA, Giorgio; Chemin des Croix-Rouges GOOF 17/30 (2006.01) GOOF 19/00 (2011.01) 10, 1007 Lausanne (CH). RENZI, Daniele; Route Aloys- Fauquez 105, 1018 Lausanne (CH). (21) International Application Number: PCT/US2017/017841 (74) Agent: ETTEHADIEH, Aslan; Aslan Law, P.C., 7804 Holmes Run Drive, Falls Church, Virginia 22042 (US). (22) International Filing Date: 14 February 2017 (14.02.2017) (81) Designated States (unless otherwise indicated, for every (25) Filing Language: English kind of national protection available): AE, AG, AL, AM, AO, AT, AU, AZ, BA, BB, BG, BH, BN, BR, BW, BY, BZ, (26) Publication Language: English CA, CH, CL, CN, CO, CR, CU, CZ, DE, DJ, DK, DM, DO, (30) Priority Data: DZ, EC, EE, EG, ES, FI, GB, GD, GE, GH, GM, GT, HN, PCT/EP2016/074311 HR, HU, ID, IL, IN, IR, IS, JP, KE, KG, KH, KN, KP, KR, KW, KZ, LA, LC, LK, LR, LS, LU, LY, MA, MD, ME, MG, 11 October 2016 (11.10.2016) EP MK, MN, MW, MX, MY, MZ, NA, NG, NI, NO, NZ, OM, PCT/EP2016/074301 PA, PE, PG, PH, PL, PT, QA, RO, RS, RU, RW, SA, SC, 11 October 2016 (11.10.2016) EP SD, SE, SG, SK, SL, SM, ST, SV, SY, TH, TJ, TM, TN, TR, PCT/EP2016/074297 TT, TZ, UA, UG, US, UZ, VC, VN, ZA, ZM, ZW. 11 October 2016 (11.10.2016) EP PCT/EP2016/074307 (84) Designated States (unless otherwise indicated, for every 11 October 2016 (11.10.2016) EP kind of regional protection available): ARIPO (BW, GH, GM, KE, LR, LS, MW, MZ, NA, RW, SD, SL, ST, SZ, TZ, — (71) Applicant: GENOMSYS SA [CH/CH]; chemin de la Raye UG, ZM, ZW), Eurasian (AM, AZ, BY, KG, KZ, RU, TJ, 13, 1024 Ecublens VD (CH). = TM), European (AL, AT, BE, BG, CH, CY, CZ, DE, DK, (72) Inventor; and EE, ES, FI, FR, GB, GR, HR, HU, IE, IS, IT, LT, LU, LV, = (71) Applicant: BALUCH, Mohamed Khoso [US/US]; 4439 MC, MK, MT, NL, NO, PL, PT, RO, RS, SE, SI, SK, SM, Woodsedge CT, Chantilly, Virginia 20151 (US). = = — (54) Title: METHOD AND SYSTEM FOR SELECTIVE ACCESS OF STORED OR TRANSMITTED BIOINFORMATICS DATA = (57) : The storage or transmission of genomic data is realized by employing a structured compressed genomic dataset in a file or in a 1 812 One ParSet stream per Multiplex data. Selective access to the data, the da- = arSet ! ParSet 1 1 stream of genomic or subsets of ParSet , 1 ta, corresponding to specific genomic regions is achieved by employing = — 481 One GDMTL stream per Mult iplex user-defined labels based on data classification and a specific indexing i = ' GDMT! GDMTL GDMTL GDM mechanism. l , _ = ( I GDMT I I GDMT I 1GDMT -1-484:,„ G ='\" RIDMT LRIDMT 1 RIDMT —487 ° p : o tr . stream = = 12 GLL 1 GLL L GLL 4811= e lm = 480 483 I MITI !Headed L packet 1 Genomie 1Headed J_ _p_ B 110 (I k streams = - 0 Headed I E 1 .,\"' 484 c t i 3 , ---' 4813 426- Th Access Units = M o Header( H I I II Ur I-leaded I I I II I — .E 48 i 2 GDMT GDMT , 1GDMT 1 o 11 o c r ' H ' RIDMT I [RIDMT RIDMT W 2 f GLL I GLL I LL ll• ----4812 ir) {Heade acke _I_ J 0 Header B _I a_ (7 11 0 Header IN 4813 --.... 11 © r'l 488 486 Access Units \" 489 4810 Figure 4B C [Continued on next page] WO 2018/071054 Al 1111111111111101110111111111111111111111011111111111010111111001M11E110111111 TR), OAPI (BF, BJ, CF, CG, CI, CM, GA, GN, GQ, GW, KM, ML, MR, NE, SN, TD, TG). Published: — with international search report (Art. 21(3))