update dataset reading script.
Browse files- NASA_OSDR.py +4 -6
- tests/test_nasa_osdr.py +3 -4
NASA_OSDR.py
CHANGED
@@ -544,10 +544,8 @@ class NasaOsdr(datasets.GeneratorBasedBuilder):
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def _generate_examples(self, file: str):
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for
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yield idx, _item
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idx += 1
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]
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def _generate_examples(self, file: str):
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df = pd.read_csv(file, index_col=None)
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for idx, row in df.iterrows():
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_item = {**row.to_dict()}
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yield idx, _item
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tests/test_nasa_osdr.py
CHANGED
@@ -32,16 +32,15 @@ def test_inherit_generator_base_builder_works():
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def test_generate_examples():
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dataset = NasaOsdr()
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train_data = dataset._generate_examples(assays_file='data/train/samples.csv')
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idx, sample = next(iter(train_data))
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print(idx, sample.keys())
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def test_load_dataset():
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from datasets import load_dataset
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dataset = load_dataset("nasa_osdr.py")
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print(len(dataset["train"]))
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def test_generate_examples():
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dataset = NasaOsdr(name='experiments')
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train_data = dataset._generate_examples(file='data/train/experiments.csv')
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idx, sample = next(iter(train_data))
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print(idx, sample.keys())
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def test_load_dataset():
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from datasets import load_dataset
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dataset = load_dataset("nasa_osdr.py", "experiments")
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print(len(dataset["train"]))
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