OncoGAN-syntheticVCFs / CNS-PiloAstro /CNS-PiloAstro_sim27.vcf
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##fileformat=VCFv4.2
##fileDate=20241012
##source=OncoGAN-v0.1
##reference=hg19
##INFO=<ID=AF,Number=A,Type=Float,Description="Allele Frequency">
##INFO=<ID=MS,Number=A,Type=String,Description="Mutation type or mutational signature assigned to each mutation. Available options are: SBS (single base substitution signature), DNP (dinucleotide polymorphism), TNP (trinucleotide polymorphism), DEL (deletion), INS (insertion), driver* (driver mutation sampled from real donors)">
#CHROM POS ID REF ALT QUAL FILTER INFO
1 50595389 sim27 G A . . AF=0.27;MS=SBS5
1 107074117 sim27 T C . . AF=0.09;MS=SBS5
1 172790477 sim27 G T . . AF=0.17;MS=SBS5
1 212330936 sim27 C T . . AF=0.35;MS=SBS1
1 231523317 sim27 G A . . AF=0.34;MS=SBS5
2 20807323 sim27 G A . . AF=0.28;MS=SBS1
2 21362893 sim27 C T . . AF=0.28;MS=SBS1
2 43587576 sim27 A G . . AF=0.35;MS=SBS5
2 111620862 sim27 A G . . AF=0.23;MS=SBS5
2 125835397 sim27 C T . . AF=0.33;MS=SBS5
2 126728694 sim27 G T . . AF=0.2;MS=SBS5
2 145977624 sim27 T C . . AF=0.03;MS=SBS5
2 148944640 sim27 C G . . AF=0.1;MS=SBS5
2 149609502 sim27 T G . . AF=0.06;MS=SBS5
2 199098872 sim27 C T . . AF=0.4;MS=SBS1
3 89476818 sim27 G A . . AF=0.36;MS=SBS1
3 108349834 sim27 T A . . AF=0.42;MS=SBS5
3 145447034 sim27 A G . . AF=0.47;MS=SBS5
3 146369665 sim27 C T . . AF=0.24;MS=SBS5
3 164826770 sim27 TCTTGAGACC T . . AF=0.36;MS=DEL
3 168023935 sim27 G C . . AF=0.41;MS=SBS5
3 194096960 sim27 C T . . AF=0.23;MS=SBS1
4 40251794 sim27 T A . . AF=0.47;MS=SBS5
4 94442667 sim27 G T . . AF=0.23;MS=SBS5
4 96518979 sim27 G A . . AF=0.29;MS=SBS5
4 116590780 sim27 C T . . AF=0.28;MS=SBS5
4 126183890 sim27 G A . . AF=0.07;MS=SBS5
4 140811047 sim27 T C . . AF=0.1;MS=SBS5
4 153284540 sim27 C T . . AF=0.52;MS=SBS5
4 162495300 sim27 G T . . AF=0.27;MS=SBS5
4 167556227 sim27 C T . . AF=0.13;MS=SBS5
4 170428509 sim27 C G . . AF=0.46;MS=SBS5
4 189237451 sim27 G A . . AF=0.25;MS=SBS1
4 189540714 sim27 C T . . AF=0.1;MS=SBS1
4 190355867 sim27 C T . . AF=0.35;MS=SBS1
5 29581821 sim27 G A . . AF=0.16;MS=SBS5
5 36054592 sim27 C T . . AF=0.08;MS=SBS1
5 36580527 sim27 G A . . AF=0.24;MS=SBS1
5 44742983 sim27 T C . . AF=0.81;MS=SBS5
5 66857976 sim27 A G . . AF=0.16;MS=SBS5
5 95233761 sim27 G A . . AF=0.27;MS=SBS5
5 99620886 sim27 T C . . AF=0.15;MS=SBS5
5 104041298 sim27 A T . . AF=0.11;MS=SBS5
5 135937364 sim27 T C . . AF=0.36;MS=SBS5
5 141870796 sim27 G A . . AF=0.26;MS=SBS1
5 162172012 sim27 G A . . AF=0.16;MS=SBS1
5 163788250 sim27 G A . . AF=0.46;MS=SBS5
5 180391886 sim27 A T . . AF=0.27;MS=SBS5
6 49724600 sim27 T C . . AF=0.14;MS=SBS5
6 74301142 sim27 T C . . AF=0.04;MS=SBS5
6 78237588 sim27 G A . . AF=0.36;MS=SBS1
6 92729895 sim27 T G . . AF=0.26;MS=SBS5
6 94020510 sim27 C T . . AF=0.35;MS=SBS5
6 118668509 sim27 A G . . AF=0.24;MS=SBS5
6 139526751 sim27 C T . . AF=0.49;MS=SBS5
6 142313213 sim27 G A . . AF=0.71;MS=SBS1
6 144428248 sim27 C A . . AF=0.47;MS=SBS5
7 17768943 sim27 G A . . AF=0.43;MS=SBS1
7 38045254 sim27 A G . . AF=0.25;MS=SBS5
7 46734096 sim27 C T . . AF=0.36;MS=SBS5
7 123196444 sim27 G A . . AF=0.22;MS=SBS1
7 126123272 sim27 G T . . AF=0.25;MS=SBS5
7 139822111 sim27 A G . . AF=0.36;MS=SBS5
7 140474161 sim27 A T . . AF=0.11;MS=driver_BRAF_Intron
8 14375779 sim27 G A . . AF=0.09;MS=SBS5
8 23625357 sim27 G A . . AF=0.11;MS=SBS5
8 25549924 sim27 G A . . AF=0.29;MS=SBS1
8 37037130 sim27 C T . . AF=0.38;MS=SBS5
8 52979217 sim27 G A . . AF=0.38;MS=SBS1
8 56436463 sim27 A T . . AF=0.1;MS=SBS5
8 72813195 sim27 G A . . AF=0.15;MS=SBS1
8 82278037 sim27 C T . . AF=0.45;MS=SBS5
8 83482684 sim27 G A . . AF=0.36;MS=SBS5
8 89181206 sim27 G T . . AF=0.09;MS=SBS1
8 92150239 sim27 C T . . AF=0.28;MS=SBS1
8 110926258 sim27 G A . . AF=0.38;MS=SBS1
8 137148198 sim27 T G . . AF=0.16;MS=SBS5
8 138814645 sim27 G C . . AF=0.13;MS=SBS5
9 30500031 sim27 C T . . AF=0.09;MS=SBS5
9 71078415 sim27 C G . . AF=0.13;MS=SBS5
9 74706181 sim27 C T . . AF=0.24;MS=SBS1
9 84363319 sim27 C T . . AF=0.39;MS=SBS5
10 8983898 sim27 G C . . AF=0.13;MS=SBS5
10 14732688 sim27 T G . . AF=0.21;MS=SBS5
10 58069217 sim27 T C . . AF=0.16;MS=SBS5
10 58233138 sim27 G T . . AF=0.23;MS=SBS5
10 58402461 sim27 A C . . AF=0.41;MS=SBS5
11 7793534 sim27 C G . . AF=0.54;MS=SBS5
11 58961395 sim27 C T . . AF=0.31;MS=SBS5
11 98666791 sim27 C T . . AF=0.45;MS=SBS5
11 99280598 sim27 G T . . AF=0.33;MS=SBS5
12 29100221 sim27 G A . . AF=0.45;MS=SBS5
12 33845317 sim27 A T . . AF=0.79;MS=SBS5
12 61895958 sim27 C T . . AF=0.17;MS=SBS5
12 78897556 sim27 A G . . AF=0.35;MS=SBS5
12 84704268 sim27 G A . . AF=0.07;MS=SBS1
12 86415482 sim27 G A . . AF=0.03;MS=SBS1
12 109782696 sim27 C T . . AF=0.36;MS=SBS5
12 133814970 sim27 C A . . AF=0.36;MS=SBS5
13 82248979 sim27 T C . . AF=0.2;MS=SBS5
13 88796926 sim27 T A . . AF=0.88;MS=SBS1
15 37041973 sim27 G A . . AF=0.09;MS=SBS1
15 100499548 sim27 A T . . AF=0.36;MS=SBS5
16 16520818 sim27 A C . . AF=0.12;MS=SBS5
16 54281174 sim27 C T . . AF=0.24;MS=SBS1
16 56571786 sim27 G A . . AF=0.42;MS=SBS1
16 73754695 sim27 T C . . AF=0.36;MS=SBS5
17 32070028 sim27 G T . . AF=0.26;MS=SBS5
17 53249017 sim27 C T . . AF=0.37;MS=SBS1
17 76235833 sim27 C A . . AF=0.27;MS=SBS5
18 9029795 sim27 C T . . AF=0.43;MS=SBS1
18 27539881 sim27 G A . . AF=0.07;MS=SBS1
18 43053434 sim27 G T . . AF=0.21;MS=SBS5
18 67249556 sim27 G A . . AF=0.22;MS=SBS5
19 15270294 sim27 G A . . AF=0.79;MS=SBS1
20 13153540 sim27 G A . . AF=0.18;MS=SBS5
20 13851253 sim27 AA A . . AF=0.28;MS=DEL
20 43895090 sim27 G A . . AF=0.3;MS=SBS5
20 53908218 sim27 G C . . AF=0.21;MS=SBS5
21 20588784 sim27 G A . . AF=0.17;MS=SBS5
21 24445014 sim27 G A . . AF=0.09;MS=SBS5
22 33496227 sim27 G A . . AF=0.22;MS=SBS1
X 311892 sim27 C T . . AF=0.12;MS=SBS1
X 12579751 sim27 T A . . AF=0.24;MS=SBS5
X 63585931 sim27 A T . . AF=0.34;MS=SBS5
X 73386404 sim27 G T . . AF=0.45;MS=SBS5
X 76641781 sim27 G A . . AF=0.42;MS=SBS5
X 81391162 sim27 C A . . AF=0.46;MS=SBS5
X 83828149 sim27 C T . . AF=0.69;MS=SBS5
X 89592991 sim27 T C . . AF=0.41;MS=SBS5
X 92685282 sim27 C T . . AF=0.09;MS=SBS1
X 117240481 sim27 C CG . . AF=0.05;MS=INS
X 121877639 sim27 G T . . AF=0.46;MS=SBS5
Y 9009896 sim27 G A . . AF=0.32;MS=SBS1