cell_benchmark / cell_benchmark.py
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Update cell_benchmark.py
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import os
import datasets
#datasets.logging.set_verbosity_debug()
#datasets.logging.set_verbosity_info()
#logger = datasets.logging.get_logger(__name__)
_DESCRIPTION = """\
A segmentation dataset for [TODO: complete...]
"""
_HOMEPAGE = "https://huggingface.co/datasets/alkzar90/cell_benchmark"
_EXTENSION = [".jpg", ".png"]
_URL_BASE = "https://huggingface.co/datasets/alkzar90/cell_benchmark/resolve/main/data/"
_SPLIT_URLS = {
"train": _URL_BASE + "train.zip",
"val": _URL_BASE + "val.zip",
"test": _URL_BASE + "test.zip",
"masks_train": _URL_BASE + "masks/train.zip",
"masks_val": _URL_BASE + "masks/val.zip",
"masks_test": _URL_BASE + "masks/test.zip",
}
class Cellsegmentation(datasets.GeneratorBasedBuilder):
def _info(self):
features = datasets.Features({
"image": datasets.Image(),
"masks": datasets.Image(),
#"path" : datasets.Value("string"),
})
return datasets.DatasetInfo(
description=_DESCRIPTION,
features=datasets.Features(features),
supervised_keys=("image", "masks"),
homepage=_HOMEPAGE,
citation="",
)
def _split_generators(self, dl_manager):
data_files = dl_manager.download_and_extract(_SPLIT_URLS)
splits = [
datasets.SplitGenerator(
name=datasets.Split.TRAIN,
gen_kwargs={
"files" : dl_manager.iter_files([data_files["train"]]),
"masks": dl_manager.iter_files([data_files["masks_train"]]),
"split": "training",
},
),
datasets.SplitGenerator(
name=datasets.Split.VALIDATION,
gen_kwargs={
"files" : dl_manager.iter_files([data_files["val"]]),
"masks": dl_manager.iter_files([data_files["masks_val"]]),
"split": "validation",
},
),
datasets.SplitGenerator(
name=datasets.Split.TEST,
gen_kwargs={
"files" : dl_manager.iter_files([data_files["test"]]),
"masks": dl_manager.iter_files([data_files["masks_test"]]),
"split": "test",
}
)
]
return splits
def _generate_examples(self, files, masks, split):
for i, path in enumerate(zip(files, masks)):
yield i, {
"image": path[0],
"masks": path[1],
}