NothingMuch/GO-Terms huggingface dataset:
A multimeric ring of proteins through which the DNA enters and exits the viral capsid.
viral portal complex
A complex of proteins that form a scaffold around which the viral capsid is constructed.
viral scaffold
The assembly and maintenance of the viral scaffold around which the viral capsid is constructed.
viral scaffold assembly and maintenance
Binding to the extracellular matrix of a host cell.
host cell extracellular matrix binding
Binds to and stops, prevents or reduces the activity of histone deacetylase, which catalyzes of the removal of acetyl groups from histones, proteins complexed to DNA in chromatin and chromosomes.
histone deacetylase inhibitor activity
A vesicle used to transport the partial or complete virion between cellular compartments.
virion transport vesicle
Interacts with chemokine receptors to reduce the action of a chemokine.
chemokine receptor antagonist activity
A location in the host cell nucleus where viral proteins colocalize late in infection prior to the onset of viral DNA synthesis. More than one site can be present simultaneously.
dense nuclear body
The process of introducing one or more phosphate groups into a lipid, any member of a group of substances soluble in lipid solvents but only sparingly soluble in aqueous solvents.
lipid phosphorylation
The process of introducing a phosphate group into a carbohydrate, any organic compound based on the general formula Cx(H2O)y.
carbohydrate phosphorylation
Establishment of the dorsal filaments, elaborate specializations of the chorion that protrude from the anterior end of the egg and facilitate embryonic respiration.
dorsal appendage formation
Establishment of the micropyle, a single cone-shaped specialization of the chorion that allows sperm entry into the egg prior to fertilization.
chorion micropyle formation
The lipid bilayer surrounding a glycosome.
glycosome membrane
The directed movement of carotenoids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Carotenoids are tetraterpenoid compounds in which two units of 4 isoprenoid residues joined head-to-tail are themselves joined tail-to-tail.
carotenoid transport
An intracellular, often complex, membranous structure, sometimes with additional membranous lamellae inside, found in bacteria. They are associated with synthesis of DNA and secretion of proteins.
mesosome
Binding to calcium oxalate, CaC2O4, a salt of oxalic acid. In animals, it may be excreted in urine or retained in the form of urinary calculi.
calcium oxalate binding
Binds to and stops, prevents or reduces the activity of pectinesterase.
pectinesterase inhibitor activity
Catalysis of the transfer of a pyruvyl (oxopropanoyl) group from one compound to another.
pyruvyltransferase activity
Catalysis of the reaction: L-azetidine-2-carboxylic acid + acetyl-CoA = CoA-SH + N-acetyl azetidine-2-carboxylic acid.
azetidine-2-carboxylic acid acetyltransferase activity
A decrease in a behavioral response to a repeated stimulus. This is exemplified by the failure of a person to show a startle response to a loud noise that has been repeatedly presented.
habituation
An increased in a behavioral response to a repeated stimulus. For example, a shock to the tail of the marine snail Aplysia, to which the snail responds by withdrawing its gill, will result in increased gill withdrawal the next time the skin is touched.
sensitization
Binding to the TAP1 subunit of TAP (transporter associated with antigen processing) protein.
TAP1 binding
Binding to the TAP2 subunit of TAP (transporter associated with antigen processing) protein.
TAP2 binding
Binding to a nonidentical protein to form a heterodimer.
protein heterodimerization activity
Catalysis of the transfer, in a beta 1,3 linkage, of D-glucuronic acid (GlcUA) from UDP-GlcUA to asioloorosomucoid.
asioloorosomucoid beta-1,3-glucuronosyltransferase activity
Catalysis of the transfer, in a beta 1,3 linkage, of D-glucuronic acid (GlcUA) from UDP-GlcUA to the disaccharide galactosyl beta-1,3 N-acetylgalactosamine, a common component of glycoproteins and glycolipids.
galactosyl beta-1,3 N-acetylgalactosamine beta-1,3-glucuronosyltransferase activity
Catalysis of the reaction: benzene-1,2,4-triol + O2 = maleylacetate + 2 H+.
4-hydroxycatechol 1,2-dioxygenase activity
Catalysis of the reaction: 1,2-diacyl-3-beta-D-galactosyl-sn-glycerol + CMP-N-acetyl-beta-neuraminate = 1,2-diacyl-3--sn-glycerol + CMP + H+.
galactosyldiacylglycerol alpha-2,3-sialyltransferase activity
Catalysis of the reaction: H2O + N-acetyl-D-galactosamine 6-phosphate = acetate + D-galactosamine 6-phosphate.
N-acetylgalactosamine-6-phosphate deacetylase activity
Catalysis of the reaction: xanthan = oligosaccharide with 4-deoxy-alpha-L-threo-hex-4-enuronosyl end + pyruvylate mannose. This reaction is the eliminative cleavage of the terminal beta-D-mannosyl-beta-D-1,4-glucuronosyl linkage of the side-chain of the polysaccharide xanthan, leaving a 4-deoxy-alpha-L-threo-hex-4-enuronosyl group at the terminus of the side-chain.
xanthan lyase activity
Catalysis of the reaction: (S)-(+)-allantoin = (R)-(-)-allantoin.
allantoin racemase activity
Catalysis of the reaction: L-arginine = D-arginine.
arginine racemase activity
Catalysis of the reaction: galactitol + NAD+ = D-tagatose + H+ + NADH.
galactitol 2-dehydrogenase activity
Catalysis of the reaction: D-arabinitol + NAD+ = D-xylulose + NADH.
D-arabinitol 4-dehydrogenase activity
Catalysis of the reaction: D-iditol + NAD+ = D-sorbose + NADH.
D-iditol 2-dehydrogenase activity
Catalysis of the reaction: 2'-deoxyuridine + phosphate = 2-deoxy-alpha-D-ribose 1-phosphate + uracil.
deoxyuridine phosphorylase activity
Catalysis of the reaction: L-gulono-1,4-lactone + NADP+ = D-glucurono-3,6-lactone + H+ + NADPH.
glucuronolactone reductase activity
The cell membranes and intracellular regions in a plant are connected through plasmodesmata, and plants may be described as having two major compartments: the living symplast and the non-living apoplast. The apoplast is external to the plasma membrane and includes cell walls, intercellular spaces and the lumen of dead structures such as xylem vessels. Water and solutes pass freely through it.
apoplast
The process whose specific outcome is the progression of the R1 and R6 pair of photoreceptors in the eye over time, from their formation to the mature structures. R1 and R6 are paired photoreceptors that contribute to the outer rhabdomeres. An example of this process is found in Drosophila melanogaster.
R1/R6 development
The process whose specific outcome is the progression of the R2 and R5 pair of photoreceptors in the eye over time, from their formation to the mature structures. R2 and R5 are paired photoreceptors that contribute to the outer rhabdomeres. An example of this process is found in Drosophila melanogaster.
R2/R5 development
The process whose specific outcome is the progression of the R3 and R4 pair of photoreceptors in the eye over time, from their formation to the mature structures. R3 and R4 are paired photoreceptors that contribute to the outer rhabdomeres. An example of this process is found in Drosophila melanogaster.
R3/R4 development
The establishment, maintenance and elaboration of the anterior/posterior axis of the wing disc, a precursor to the wing.
wing disc anterior/posterior pattern formation
Orientation of body hairs, projections from the surface of an organism, such that the hairs all point in a uniform direction along the surface.
establishment of body hair planar orientation
Formation of a single follicular epithelium around the germ-line derived cells of a cyst formed in the male gonad.
male germ-line cyst encapsulation
Binding to tau protein. tau is a microtubule-associated protein, implicated in Alzheimer's disease, Down Syndrome and ALS.
tau protein binding
A protein complex that acts as an activin receptor. Heterodimeric activin receptors, comprising one Type I activin receptor and one Type II receptor polypeptide, and heterotrimeric receptors have been observed.
activin receptor complex
Binding to activin, a dimer of inhibin-beta subunits.
activin binding
A protein complex involved in regulation of chromatin remodeling. In Schizosaccharomyces the complex contains Lid2, Ash2, Jmj3, Snt2, and Sdc1.
Lid2 complex
The gel-like pectin matrix consists of the interlinked acidic and neutral pectin networks that are further cross-linked by calcium bridges. Pectins consist largely of long chains of mostly galacturonic acid units (typically 1,4 linkages and sometimes methyl esters). Three major pectic polysaccharides (homogalacturonan, rhamnogalacturonan I and rhamnogalacturonan II) are thought to occur in all primary cell walls.
pectic matrix
Network composed of hemicelluloses; members of a class of plant cell wall polysaccharide that cannot be extracted from the wall by hot water or chelating agents, but can be extracted by aqueous alkali. Includes xylan, glucuronoxylan, arabinoxylan, arabinogalactan II, glucomannan, xyloglucan and galactomannan.
hemicellulose network
An extracellular matrix part that consists of lignin in the form of a three-dimensional polymeric network. Lignins are complex racemic aromatic heteropolymers derived from a variety of phenylpropane monomers coupled together by an assortment of carbon-carbon and ether linkages. Lignin is crucial for structural integrity of the cell wall and stiffness and strength of the stem. In addition, lignin waterproofs the cell wall, enabling transport of water and solutes through the vascular system, and plays a role in protecting plants against pathogens.
lignin network
An extracellular matrix part that consists of fatty acid-derived polymers, including both aromatic and aliphatic components. The suberin network is found in specialized plant cell walls, where it is laid down between the primary wall and plasma membrane, forms protective and wound-healing layers, and provides a water-impermeable diffusion barrier.
suberin network
Region of plant cell wall specialised to act as a seal to prevent back leakage of secreted material (analogous to tight junction between epithelial cells). Found particularly where root parenchymal cells secrete solutes into xylem vessels. The barrier is composed of suberin; a fatty substance, containing long chain fatty acids and fatty esters, also found in the cell walls of cork cells (phellem) in higher plants.
Casparian strip
Binding to a CXCR3 chemokine receptor.
CXCR3 chemokine receptor binding
Catalysis of the reaction: NADP+ + 3-dehydro-alpha-D-glucose = NADPH + alpha-D-glucose.
3-ketoglucose-reductase activity
The process in which the anatomical structures of determinate inflorescences are generated and organized. A determinate inflorescence is one that can only produce a predetermined number of floral meristems.
determinate inflorescence morphogenesis
The process in which the anatomical structures of determinate inflorescences are generated and organized. A determinate inflorescence is one that can produce an undefined number of floral meristems.
indeterminate inflorescence morphogenesis
The process in which the anatomical structures of the seed are generated and organized.
seed morphogenesis
Nucleus resulting from the fusion of the male gamete and two polar nuclei in the central cell of the embryo sac.
primary endosperm nucleus
The process whose specific outcome is the progression of the mesectoderm over time, from its formation to the mature structure. In animal embryos, mesectoderm development processes give rise to both mesoderm and ectoderm tissues.
mesectoderm development
Any process that reduces the pH of the endosomal lumen, measured by the concentration of the hydrogen ion.
endosomal lumen acidification
The process that gives rise to the floral whorl. This process pertains to the initial formation of a structure from unspecified parts.
floral whorl formation
The process that gives rise to the flower. This process pertains to the initial formation of a structure from unspecified parts.
flower formation
The process in which D-methionine is transported across a lipid bilayer, from one side of a membrane to the other.
D-methionine transmembrane transport
The process whose specific outcome is the progression of the style over time, from its formation to the mature structure. The style is an elongated part of a carpel, or group of fused carpels, and it lies between the ovary and the stigma.
style development
The process whose specific outcome is the progression of the stigma over time, from its formation to the mature structure. The stigma is the pollen-receptive surface of a carpel or group of fused carpels, usually sticky.
stigma development
The process whose specific outcome is the progression of the enteric nervous system over time, from its formation to the mature structure. The enteric nervous system is composed of two ganglionated neural plexuses in the gut wall which form one of the three major divisions of the autonomic nervous system. The enteric nervous system innervates the gastrointestinal tract, the pancreas, and the gallbladder. It contains sensory neurons, interneurons, and motor neurons. Thus the circuitry can autonomously sense the tension and the chemical environment in the gut and regulate blood vessel tone, motility, secretions, and fluid transport. The system is itself governed by the central nervous system and receives both parasympathetic and sympathetic innervation.
enteric nervous system development
The process in which the identity of a floral organ is maintained. Identity is considered to be the aggregate of characteristics by which a structure is recognized.
maintenance of floral organ identity
The process that determines the orientation of petals with reference to the central axis.
establishment of petal orientation
A complex consisting of a protein and RNA component which binds the signal sequence of some proteins and facilitates their export to or across the plasma membrane.
signal recognition particle, plasma membrane targeting
The process controlling the point in time during development when a vegetative meristem will change its identity to become an inflorescence or floral meristem, and/or the rate at which the change occurs.
regulation of timing of transition from vegetative to reproductive phase
The process in which the anatomical structures of a fruit are generated and organized. A fruit is a reproductive body of a seed plant.
fruit morphogenesis
The process whose specific outcome is the progression of the bone marrow over time, from its formation to the mature structure.
bone marrow development
The process whose specific outcome is the progression of the bursa of Fabricius over time, from its formation to the mature structure. The bursa of Fabricius is an organ found in birds involved in B cell differentiation.
bursa of Fabricius development
The process that determines the orientation of an animal organ or tissue with reference to an axis.
establishment of animal organ orientation
The aggregation, arrangement and bonding together of a set of components to form a photosystem I complex on the thylakoid membrane.
photosystem I assembly
The process in which the developmental fate of a cell becomes restricted such that it will develop into an oocyte.
oocyte fate commitment
The process in which the anatomical structures of the anterior midgut (ectodermal) are generated and organized, during the embryonic phase.
embryonic anterior midgut (ectodermal) morphogenesis
The process in which the anatomical structures of the anterior midgut (ectodermal) are generated and organized, during the post-embryonic phase.
post-embryonic anterior midgut (ectodermal) morphogenesis
The process in which the anatomical structures of the foregut are generated and organized, during the embryonic phase.
embryonic foregut morphogenesis
The process in which the anatomical structures of the foregut are generated and organized, during the post-embryonic phase.
post-embryonic foregut morphogenesis
The process in which the anatomical structures of the hindgut are generated and organized, during the post-embryonic phase.
post-embryonic hindgut morphogenesis
The process in which individuals, having the potential to develop any of several distinct developmental paths, have their individual developmental fate determined in response to genetic cues. Individuals with distinct developmental fates perform different functions in a colony of social insects.
caste determination, influence by genetic factors
The process in which individuals, having the potential to develop any of several distinct developmental paths, have their individual developmental fate determined in response to environmental cues. Individuals with distinct developmental fates perform different functions in a colony of social insects.
caste determination, influence by environmental factors
The process in which the anatomical structures of labrum are generated and organized.
labrum morphogenesis
The process in which the anatomical structures of the anterior cibarial plate are generated and organized.
anterior cibarial plate morphogenesis
The process in which the anatomical structures of the epistomal sclerite are generated and organized.
epistomal sclerite morphogenesis
The process in which the anatomical structures of the posterior cibarial plate are generated and organized.
posterior cibarial plate morphogenesis
The process in which the anatomical structures of the clypeus are generated and organized.
clypeus morphogenesis
The process in which the anatomical structures of a haltere are generated and organized.
haltere morphogenesis
The process in which the anatomical structures of the compound eye corneal lens are generated and organized.
compound eye corneal lens morphogenesis
The process in which a relatively unspecialized cell acquires specialized features of a sieve cell. A sieve cell is a type of sieve element that has relatively undifferentiated sieve areas (with narrow pores). The sieve areas are rather uniform in structure on all walls; that is, there are no sieve plates. Typical of gymnosperms and lower vascular plants. The sieve element is the cell in the phloem tissue concerned with mainly longitudinal conduction of food materials.
sieve cell differentiation
The process in which a relatively unspecialized cell acquires specialized features of a companion cell. The companion cell is the specialized parenchyma cell associated with a sieve-tube member in angiosperm phloem and arising from the same mother cell as the sieve-tube member.
companion cell differentiation
The process in which a relatively unspecialized cell acquires specialized features of a collenchyma cell. This is a plant cell in which the primary cell walls are unevenly thickened, with most thickening occurring at the cell corners. Cells are living and able to grow, they are elongated, and lignin and secondary walls absent. Collenchyma cells make up collenchyma tissue which acts as a supporting tissue in growing shoots, leaves and petioles. This tissue is often arranged in cortical ribs, as seen prominently in celery and rhubarb petioles.
collenchyma cell differentiation
The process in which a protrusion or bulge is formed at the site of plant root hair outgrowth.
root hair initiation
The process whose specific outcome is the progression of the hatching gland over time, from its formation to the mature structure. The cells of the hatching gland contain enzymes responsible for solubilization of the egg chorion, facilitating the hatching process.
hatching gland development
The process in which the anatomical structures of the antennal joint are generated and organized.
antennal joint morphogenesis
The process in which the anatomical structures of the dorsal part of the body are generated and organized.
notum morphogenesis
The process in which the anatomical structures of the analia of the female are generated and organized. The analia is the posterior-most vertral appendage that develops from the genital disc. An example of this process is found in Drosophila melanogaster.
female analia morphogenesis
The process in which the anatomical structures of the analia of the male are generated and organized. The analia is the posterior-most vertral appendage that develops from the genital disc.
male analia morphogenesis
The process in which the anatomical structures of the ocellus are generated and organized. The ocellus is a simple visual organ of insects.
ocellus morphogenesis
The process whose specific outcome is the progression of the root cap over time, from its formation to the mature structure. The root cap protects the root meristem from friction as the root grows through the soil. The cap is made up of a group of parenchyma cells which secrete a glycoprotein mucilage as a lubricant.
root cap development
The process whose specific outcome is the progression of adventitious root over time, from its formation to the mature structure. Adventitious roots are post-embryonic roots that develop from the plant shoot.
adventitious root development
Any process that reduces the number of petals produced in a developing flower.
specification of decreased petal number
Any process that increases the number of petals produced in a developing flower.
specification of increased petal number
The process in which the dormant state is broken in a seed. Dormancy is characterized by a suspension of physiological activity that can be reactivated upon release.
release of seed from dormancy
Any biological process involved in the maintenance of the steady-state number of cells within a population of cells in the retina.
homeostasis of number of retina cells
The process in which a migrating neuromast primordium deposits clusters of undifferentiated cells (proneuromasts) along its migratory path in the developing anterior lateral line.
anterior lateral line neuromast deposition
The process whose specific outcome is the progression of the anterior lateral line neuromast cupula over time, from its formation to the mature structure. The cupula is secreted by mantle cells and the ciliary bundles of all of the hair cells of the neuromast are embedded in it. The cupula provides a mechanical linkage between the hair cells and the external hydrodynamic environment. The cupula of superficial neuromasts grows continuously, while the height of the cupula of canal neuromasts is limited by canal diameter.
anterior lateral line neuromast cupula development
The process in which a relatively unspecialized cell acquires specialized features of an anterior lateral line neuromast mantle cell. Mantle cells are non-sensory cells that surround the sensory strip, separating the neuromast from the epidermis. Mantle cells secrete the cupula in which the ciliary bundles of all of the hair cells are embedded.
anterior lateral line neuromast mantle cell differentiation
The process in which a relatively unspecialized cell acquires specialized features of an anterior lateral line neuromast support cell. Support cells are non-sensory cells of the neuromast that extend between the sensory hair cells from the basement membrane to the apical surface; they are surrounded by mantle cells.
anterior lateral line neuromast support cell differentiation
The process in which a relatively unspecialized cell acquires specialized features of a neuron of the anterior lateral line ganglion.
anterior lateral line ganglion neuron differentiation
The process whose specific outcome is the progression of an afferent axon in the anterior lateral line nerve over time from its formation to the mature structure. This process includes axonogenesis and pathfinding of the afferent axons in the anterior lateral line nerve.
afferent axon development in anterior lateral line nerve
The process whose specific outcome is the progression of an efferent axon in the anterior lateral line nerve over time from its formation to the mature structure. This process includes axonogenesis and pathfinding of the efferent axons in the anterior lateral line nerve.
efferent axon development in anterior lateral line nerve
The movement of a glial cell along the axons in the anterior lateral line nerve.
glial cell migration in anterior lateral line nerve
The formation of compact myelin sheaths around the axons of the anterior lateral line nerve.
myelination of anterior lateral line nerve axons