NothingMuch/GO-Terms huggingface dataset:
The acetylation of the peptidyl-lysine of proteins to form the derivative peptidyl-N6-acetyl-L-lysine.
peptidyl-lysine N6-acetylation
The formylation of the N-terminal amino acid of proteins.
N-terminal protein formylation
The glucuronylation of the N-terminal glycine of proteins to form the derivative D-glucuronyl-N-glycine.
N-terminal peptidyl-glycine N-glucuronylation
The covalent attachment of a palmitoyl group to a nitrogen (N) atom in an N-terminal cysteine residue to form N-palmitoyl-L-cysteine.
N-terminal peptidyl-L-cysteine N-palmitoylation
The trimethylation of the N-terminal alanine of proteins to form the derivative peptidyl-N,N,N-trimethyl-L-alanine.
N-terminal peptidyl-alanine trimethylation
The methylation of the N-terminal glycine of proteins to form the derivative N-methylglycine.
N-terminal peptidyl-glycine methylation
The methylation of the N-terminal proline of proteins to form the derivative N,N-dimethyl-L-proline.
N-terminal peptidyl-proline dimethylation
The methylation of peptidyl-lysine to form peptidyl-N6,N6,N6-trimethyl-L-lysine.
peptidyl-lysine trimethylation
The methylation of peptidyl-lysine to form peptidyl-N6-methyl-L-lysine.
peptidyl-lysine monomethylation
The methylation of peptidyl-lysine to form peptidyl-N6,N6-dimethyl-L-lysine.
peptidyl-lysine dimethylation
The oxidation of the terminal amino-methylene groups of peptidyl-L-lysine or peptidyl-5-hydroxy-L-lysine to aldehyde groups to form allysine or hydroxyallysine residues, respectively; these are intermediates in the formation of covalent cross-links between adjacent polypeptide chains in proteins such as collagens.
peptidyl-lysine oxidation
The oxidative deamination of the alpha carbon of an encoded N-terminal amino acid, to form pyruvic acid retaining an amide bond between its 1-carboxyl group and the adjacent residue. The pyruvate 2-oxo group may become an enzyme active site, or it may be reduced to an alcohol.
N-terminal protein amino acid deamination, from amino carbon
The phosphopantetheinylation of peptidyl-serine to form peptidyl-O-phosphopantetheine-L-serine.
peptidyl-serine phosphopantetheinylation
The addition of one or more alpha-linked glutamyl units to the gamma carboxyl group of peptidyl-glutamic acid.
protein polyglutamylation
The process of covalently linking peptidoglycan (murein) to proteins.
peptidoglycan-protein cross-linking
The phosphorylation of peptidyl-histidine to form peptidyl-1'-phospho-L-histidine (otherwise known as tau-phosphohistidine, tele-phosphohistidine) or peptidyl-3'-phospho-L-histidine (otherwise known as pi-phosphohistidine, pros-phosphohistidine).
peptidyl-histidine phosphorylation
The phosphorylation of peptidyl-arginine to form omega-N-phospho-L-arginine.
peptidyl-arginine phosphorylation
Catalysis of the reaction: L-methionine = D-methionine.
methionine racemase activity
Catalysis of the reaction: L-proline = D-proline.
proline racemase activity
Catalysis of the reaction: L-lysine = D-lysine.
lysine racemase activity
Catalysis of the reaction: L-threonine = D-threonine.
threonine racemase activity
The methylation of peptidyl-cysteine to form peptidyl-S-methyl-L-cysteine.
peptidyl-cysteine methylation
Catalysis of the reduction of a peptide-linked oxazoline to oxazole.
peptidyl-oxazoline dehydrogenase activity
Catalysis of the reduction of a peptide-linked thiazoline to thiazole.
peptidyl-thiazoline dehydrogenase activity
The formation of an isopeptide cross-link between peptidyl-lysine and peptidyl-glutamine to produce N6-(L-isoglutamyl)-L-lysine.
isopeptide cross-linking via N6-(L-isoglutamyl)-L-lysine
Catalysis of the posttranslational transfer of one or more glutamic acid residues to the C-terminus of ribosomal protein S6.
ribosomal S6-glutamic acid ligase activity
The oxidation of peptidyl-cysteine to peptidyl-L-cysteine sulfinic acid or peptidyl-L-cysteine sulfenic acid.
peptidyl-cysteine oxidation
The modification of peptidyl-proline to form trans-2,3-cis-3,4-dihydroxy-L-proline.
peptidyl-proline di-hydroxylation
The octanoylation of peptidyl-serine to form peptidyl-O3-octanoyl-L-serine, typical of the protein ghrelin.
peptidyl-serine octanoylation
The modification of peptidyl-isoleucine.
peptidyl-isoleucine modification
The modification of peptidyl-leucine.
peptidyl-leucine modification
The modification of peptidyl-valine.
peptidyl-valine modification
The linkage of phosphoribosyl dephospho-coenzyme A to protein via peptidyl-serine, to form O-(phosphoribosyl dephospho-coenzyme A)-L-serine; it is uncertain whether the phosphoribosyl glycosidic attachment to the dephospho-coenzyme A is alpha or beta, and through the 2' or the 3' position.
protein-phosphoribosyl dephospho-coenzyme A linkage
The oxidation of the C alpha-C beta bond of peptidyl-tyrosine to form peptidyl-dehydrotyrosine coupled with cyclization of neighboring residues.
peptidyl-tyrosine dehydrogenation
The formation of a covalent cross-link between RNA and a peptidyl-serine residue by the formation of O-(phospho-5'-5NA)-L-serine.
RNA-protein covalent cross-linking via peptidyl-serine
The modification of peptidyl-lysine to form N6-pyridoxal phosphate-L-lysine.
protein-pyridoxal-5-phosphate linkage via peptidyl-N6-pyridoxal phosphate-L-lysine
The formation of a linkage between a protein amino acid and flavin-adenine dinucleotide (FAD).
protein-FAD linkage
The oxidation of two peptidyl-cysteine residues to form a peptidyl-L-cystine (dicysteine) in which segments of peptide chain are linked by a disulfide bond; the cross-link may be between different or the same peptide chain.
peptide cross-linking via L-cystine
The hydroxylation of peptidyl-tyrosine to form peptidyl-dihydroxyphenylalanine.
peptidyl-tyrosine hydroxylation
The addition of a methyl group to a glutamine residue in a protein.
peptidyl-glutamine methylation
The hydroxylation of peptidyl-lysine to peptidyl-5-hydroxy-L-lysine.
peptidyl-lysine hydroxylation to 5-hydroxy-L-lysine
The modification of peptidyl-proline to form 3-hydroxy-L-proline; catalyzed by procollagen-proline 3-dioxygenase.
peptidyl-proline hydroxylation to 3-hydroxy-L-proline
The modification of peptidyl-proline to form 4-hydroxy-L-proline; catalyzed by procollagen-proline,2-oxoglutarate-4-dioxygenase.
peptidyl-proline hydroxylation to 4-hydroxy-L-proline
The aggregation, arrangement and bonding together of a protein structure comprising two or more rings that are interlocked but not covalently joined; resembling the links of a chain.
protein catenane formation
Catalysis of the transfer of N-acetylglucosamine-1-phosphate to a serine residue in a protein.
UDP-N-acetylglucosamine:serine-protein N-acetylglucosamine-1-phosphotransferase activity
Catalysis of the transfer of mannose-1-phosphate to a serine residue in a protein.
GDP-mannose:serine-protein mannose-1-phosphotransferase activity
The action characteristic of prothoracicotrophic hormone, a peptide hormone that is secreted by the brain and, upon receptor binding, acts on the prothoracic gland to stimulate the release of ecdysone in insects.
prothoracicotrophic hormone activity
Catalysis of the reaction: (S)-1-phenylethanol + NAD+ = acetophenone + H+ + NADH.
1-phenylethanol dehydrogenase activity
Catalysis of the reaction: 5-exo-hydroxycamphor + NAD+ = NADH + H+ + 2,5-diketocamphane.
5-exo-hydroxycamphor dehydrogenase activity
Catalysis of the reactions: (1R,4R)-dihydrocarvone + A = (R)-carvone + AH2, and (1R,4S)-isodihydrocarvone + A = (S)-carvone + AH2.
carvone reductase activity
Catalysis of the reaction: 3-(cis-5,6-dihydroxycyclohexa-1,3-dien-1-yl)propanoate + NAD+ = 3-(2,3-dihydroxyphenyl)propanoate + H+ + NADH. Also converts (2E)-3-(cis-5,6-dihydroxycyclohexa-1,3-dien-1-yl)prop-2-enoate to (2E)-3-(2,3-dihydroxyphenyl)prop-2-enoate.
2,3-dihydroxy-2,3-dihydro-phenylpropionate dehydrogenase activity
Catalysis of the reaction: 2,5-dichloro-2,5-cyclohexadiene-1,4-diol + NAD+ = NADH + H+ + 2,5-dichlorohydroquinone.
2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase activity
Catalysis of the reaction: nitrilotriacetate + FMNH2 + O2 = aminodiacetate + FMN + glyoxylate + H2O.
nitrilotriacetate monooxygenase activity
The acetylation of peptidyl-cysteine.
peptidyl-cysteine acetylation
Catalysis of the generic reaction: epoxide + CO2 + NAD+ + electron donor = beta-keto acid + NADH + reduced electron donor; the electron donor may be NADPH or a dithiol. This reaction is the ring opening and carboxylation of an epoxide; for example: epoxypropane + CO2 + NAD+ + NADPH = acetoacetate + NADH + NADP+.
epoxide carboxylase activity
Catalysis of the reaction: H2O + N-phenylhydroxylamine + 2 NADP+ = 2 H+ + 2 NADPH + nitrobenzene.
nitrobenzene nitroreductase activity
Catalysis of the reaction: 1,2-dihydroxynaphthalene + O2 = 2-hydroxychromene-2-carboxylate. C6 of the substrate molecular may have an NH2 group attached.
1,2-dihydroxynaphthalene dioxygenase activity
Catalysis of the reaction: p-cumate + NADH + H+ + O2 = NAD+ + cis-2,3-dihydroxy-2,3-dihydro-p-cumate.
p-cumate 2,3-dioxygenase activity
Catalysis of the reaction: benzene-1,2,4-triol + O2 = 3-hydroxy-cis,cis-muconate + 2 H+.
hydroxyquinol 1,2-dioxygenase activity
Catalysis of the reaction: 4-nitrocatechol + O2 + 4 e- + 3 H+ = H2O + nitrite + 1,2,4-benzenetriol.
4-nitrocatechol 4-monooxygenase activity
Catalysis of the reaction: AH2 + NH4+ + O2 = A + H+ + H2O + hydroxylamine.
ammonia monooxygenase activity
Catalysis of the reaction: 2,4-dichlorophenoxyacetate + 2-oxoglutarate + oxygen = 2,4-dichlorophenol + glyoxylate + succinate + CO2.
2,4-dichlorophenoxyacetate alpha-ketoglutarate dioxygenase activity
Catalysis of the reaction: dibenzofuran + NADH + H+ + O2 = 2,2',3-trihydroxybiphenyl + NAD+.
dibenzofuran 4,4a-dioxygenase activity
Catalysis of the reaction: 2,3,5-trihydroxytoluene + O2 = 2,4,6-trioxoheptanoate.
trihydroxytoluene dioxygenase activity
Catalysis of the reaction: p-nitrophenol + O2 + NADPH = H2O + NADP+ + nitrite + p-benzoquinone.
4-nitrophenol 4-monooxygenase activity
Catalysis of the reaction: 1-hydroxy-2-naphthoate + O2 + NAD(P)H + 2 H+ = NAD(P)+ + H2O + CO2 + 1,2-dihydroxynaphthalene.
1-hydroxy-2-naphthoate hydroxylase activity
Catalysis of the reaction: toluene + H+ + NADH + O2 = 4-methylphenol + H2O + NAD+.
toluene 4-monooxygenase activity
Catalysis of the reaction: dibenzothiophene + NADH + H+ + O2 = dibenzothiophene-5-oxide + NAD+ + H2O.
dibenzothiophene monooxygenase activity
Catalysis of the reaction: toluene + H+ + NADH + O2 = 2-hydroxytoluene + H2O + NAD+.
toluene 2-monooxygenase activity
Catalysis of the reaction: 2 H+ + O2 + p-cymene + 2 reduced - = 4-isopropylbenzyl alcohol + H2O + 2 oxidized -.
p-cymene methyl hydroxylase activity
Catalysis of the reaction: benzoyl acetyl-CoA + CoA = acetyl-CoA + benzoyl-CoA.
benzoyl acetate-CoA thiolase activity
Catalysis of the reaction: 3-hydroxy-5-oxohexanoyl-CoA + CoASH = 3-hydroxybutyryl-CoA + acetyl-CoA.
3-hydroxybutyryl-CoA thiolase activity
Catalysis of the reaction: 3-ketopimeloyl-CoA + CoA = glutaryl-CoA + acetyl-CoA.
3-ketopimelyl-CoA thiolase activity
Catalysis of the reaction: 6-aminohexanoate + alpha-ketoglutarate = glutamate + 6-oxohexanoate.
6-aminohexanoate transaminase activity
Catalysis of the reaction: phenol + X-phosphate = XH + phenylphosphate.
phenol kinase activity
Catalysis of the reaction: S-formylglutathione + H2O = formate + glutathione + H+.
S-formylglutathione hydrolase activity
Catalysis of the reaction: biuret + H2O = urea + CO2 + NH3.
biuret amidohydrolase activity
Catalysis of the reaction: epsilon-caprolactam + H2O = H+ + 6-aminohexanoate.
epsilon-caprolactam lactamase activity
Catalysis of the reaction: cyanurate + H2O = 1-carboxybiuret + H+.
cyanuric acid amidohydrolase activity
Catalysis of the reaction: ammelide + H2O = cyanuric acid + NH3.
ammelide aminohydrolase activity
Catalysis of the reaction: 2-chloro-4-hydroxy-6-amino-1,3,5-triazine + OH- = 2,4-dihydroxy-6-amino-1,3,5-triazine + Cl-.
2-chloro-4-hydroxy-6-amino-1,3,5-triazine aminohydrolase activity
Catalysis of the reaction: ammeline + H2O = ammelide + NH3.
ammeline aminohydrolase activity
Catalysis of the reaction: deisopropylhydroxyatrazine + H2O = NH3 + 2,4-dihydroxy-6-(N'-ethyl)amino-1,3,5-triazine.
deisopropylhydroxyatrazine aminohydrolase activity
Catalysis of the reaction: (2Z,4E)-2-hydroxy-6-oxohepta-2,4-dienoate + H2O = (2Z)-2-hydroxypenta-2,4-dienoate + acetate + H+.
2-hydroxy-6-oxohepta-2,4-dienoate hydrolase activity
Catalysis of the reaction: dihydrophloroglucinol + OH- = 3-hydroxy-5-oxohexanoate.
dihydrophloroglucinol hydrolase activity
Catalysis of the reaction: (2E,4E)-6-(2-aminophenyl)-2-hydroxy-6-oxohexa-2,4-dienoate + H2O = (2E)-2-hydroxypenta-2,4-dienoate + anthranilate + H+.
2-hydroxy-6-oxo-6-(2'-aminophenyl)hexa-2,4-dienoate hydrolase activity
Catalysis of the reaction: 2,4,6-trioxoheptanoate + H2O = acetylpyruvate + acetate.
trioxoheptanoate hydrolase activity
Catalysis of the reaction: 6-hydroxycyclohex-1-ene-1-carboxyl-CoA + H2O = 2,6-dihydroxycyclohexane-1-carboxyl-CoA.
6-hydroxycyclohex-1-ene-1-carboxyl-CoA hydratase activity
Catalysis of the reaction: cyclohex-1-ene-1-carboxyl-CoA + H2O = 2-hydroxycyclohexane-1-carboxyl-CoA.
cyclohex-1-ene-1-carboxyl-CoA hydratase activity
Catalysis of the reaction: 2-oxo-3-enoate-4-benzenoid + H2O = pyruvate + benzaldehyde derivative. Substrates are (3E)-4-(5-amino-2-hydroxy-phenyl)-2-oxo-but-3-ene-1-oic-acid (forms 5-aminosalicylaldehyde) and trans-o-hydroxybenzylidenepyruvate (forms salicylaldehyde).
trans-o-hydroxybenzylidenepyruvate hydratase-aldolase activity
Catalysis of the reaction: 3-methyl-5-hydroxy-6-(3-carboxy-3-oxopropenyl)-1H-2-pyridon + H2O = 2-oxobut-3-enanoate + 2,5,6-trihydroxy-3-methylpyridine.
3-methyl-5-hydroxy-6-(3-carboxy-3-oxopropenyl)-1H-2-pyridon hydratase-aldolase activity
Catalysis of the reaction: (S)-mandelate = (R)-mandelate.
mandelate racemase activity
Catalysis of the reaction: 2-hydroxychromene-2-carboxylate = (3E)-4-(2-hydroxyphenyl)-2-oxobut-3-enoate. (3E)-4-(2-hydroxyphenyl)-2-oxobut-3-enoate is also known as trans-o-hydroxybenzylidenepyruvate.
2-hydroxychromene-2-carboxylate isomerase activity
Catalysis of the reaction: 2-oxo-delta3-4,5,5-trimethylcyclopentenylacetate + ATP + CoA = AMP + diphosphate + 2-oxo-delta3-4,5,5-trimethylcyclopentenylacetyl-CoA.
2-oxo-delta3-4,5,5-trimethylcyclopentenylacetyl-CoA synthetase activity
Catalysis of the reaction: 3-oxo-3-phenylpropionate + CoA + ATP = AMP + diphosphate + benzoyl acetyl-CoA.
benzoyl acetate-CoA ligase activity
The first process of molting, characterized by the detachment of the old cuticle from the underlying epidermal cells.
apolysis
The shedding of the old chitin-based cuticlar fragments during the molting cycle. An example of this is found in Drosophila melanogaster.
ecdysis, chitin-based cuticle
Binding to GMP, guanosine monophosphate.
GMP binding
Binding to GDP, guanosine 5'-diphosphate.
GDP binding
The protein coat that surrounds the infective nucleic acid in some virus particles; the subunits are arranged to form a protein helix with the genetic material contained within. Tobacco mosaic virus has such a capsid structure.
helical viral capsid
A structure lying between the capsid and envelope of a virus, varying in thickness and often distributed asymmetrically.
viral tegument
Specific locations and structures in the virus infected cell involved in replicating the viral genome.
viral replication complex
Specific locations and structures in the virus infected cell involved in transcribing the viral genome.
viral transcriptional complex
The processes involved in creating a mature, stable viral genome. Begins after genome replication with a newly synthesized nucleic acid and ends when the genome is ready to be packaged. Includes the addition of proteins to the newly synthesized genome, and DNA repair processes.
viral genome maturation
The packaging of viral RNA (single-stranded or double-stranded) into a nucleocapsid.
viral RNA genome packaging
Any protein maturation process achieved by the cleavage of a peptide bond or bonds within a viral protein.
viral protein processing
The determination of sex and sexual phenotype in a male organism's germ line.
male germ-line sex determination
The determination of sex and sexual phenotypes in a female organism's soma.
female somatic sex determination
The determination of sex and sexual phenotypes in a male organism's soma.
male somatic sex determination
Catalysis of the reaction: phenanthrol + glucose = phenanthryl-beta-D-glucopyranoside + H2O.
phenanthrol glycosyltransferase activity
Catalysis of the reaction: phenanthrene-9,10-oxide + H2O = trans-9,10-dihydrodiolphenanthrene.
phenanthrene-9,10-epoxide hydrolase activity
Catalysis of the reaction: 2-octaprenylphenol + NADPH + O2 + H+ = 2-octaprenyl-6-hydroxyphenol + NADP+ + H2O.
2-octaprenylphenol hydroxylase activity
Catalysis of the reaction: tetrahydrothiophene 1-oxide + reduced acceptor = tetrahydrothiophene + acceptor.
tetrahydrothiophene 1-oxide reductase activity
Catalysis of the reaction: dihydroneopterin triphosphate = dihydroneopterin phosphate + diphosphate.
dihydroneopterin triphosphate pyrophosphohydrolase activity
Catalysis of the reaction: H2O + NADP+ = NAD+ + phosphate.
NADP phosphatase activity
Catalysis of the reaction: a halohydrin = an epoxide + a hydrogen halide.
halohydrin hydrogen-halide-lyase activity
Enables the energy-independent facilitated diffusion of a chloride ion through a transmembrane channel that opens when bound to histamine.
histamine-gated chloride channel activity
A protein complex that forms a transmembrane channel through which chloride ions may pass in response to histamine binding to the channel complex or one of its constituent parts.
histamine-gated chloride channel complex
Catalysis of the transfer of an acyl group from acyl-CoA to a nitrogen atom on an acceptor molecule.
acyl-CoA N-acyltransferase activity
Includes phosphoenolpyruvate-protein phosphatase (enzyme I of the phosphotransferase system) and protein-N(PI)-phosphohistidine-sugar phosphotransferase (enzyme II of the phosphotransferase system).
phosphoenolpyruvate-dependent sugar phosphotransferase complex
The propagation of an action potential along an axon, away from the soma.
neuronal action potential propagation
The perception of the orientation of different parts of the body with respect to one another.
perception of static position
The series of events required for an organism to receive a fast pain stimulus, convert it to a molecular signal, and recognize and characterize the signal. This is a neurological process. Fast pain is often subjectively described as a sharp or stabbing pain; in humans, the signals from a fast pain stimulus are perceived and relayed along myelinated A-delta fibers to the central nervous system, reaching their target in about 0.1 seconds.
sensory perception of fast pain
The series of events required for an organism to receive a slow pain stimulus, convert it to a molecular signal, and recognize and characterize the signal. This is a neurological process. Slow pain is often subjectively described as an aching or throbbing pain; in humans, the signals from a slow pain stimulus are perceived and relayed along unmyelinated C fibers to the central nervous system, reaching their target in about 1 second. Slow pain is often associated with tissue destruction.
sensory perception of slow pain
Partial conversion of one lactate enantiomer into another so that the specific optical rotation is decreased, or even reduced to zero, in the resulting mixture.
lactate racemization
The directed movement of the hydroxamate iron transport compound aerobactin into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Aerobactin (C22H36N4O13) is a conjugate of 6-(N-acetyl-N-hydroxylamine)-2-aminohexanoic acid and citric acid.
aerobactin transport
The reduction of nitrate to dinitrogen by four reactions; each intermediate is transformed to the next lower oxidation state; also part of cellular bioenergetics; the nitrogen compounds can serve as terminal acceptors for electron transport phosphorylation in place of oxygen.
denitrification pathway
Elongation of a saturated fatty acid chain.
fatty acid elongation, saturated fatty acid
The chemical reactions and pathways by which prostaglandins are formed from arachidonic acid, and in which prostaglandin-endoperoxide synthase (cyclooxygenase) catalyzes the committed step in the conversion of arachidonic acid to the prostaglandin-endoperoxides PGG2 and PGH2.
cyclooxygenase pathway
The chemical reactions and pathways by which arachidonic acid is converted to other compounds including epoxyeicosatrienoic acids and dihydroxyeicosatrienoic acids.
epoxygenase P450 pathway
The cyclohexanol metabolic process in which cyclohexanol is converted to adipate.
cyclohexanol oxidation
The metabolic process in which carbon monoxide (CO) is oxidized to carbon dioxide (CO2) to generate energy. Conservation of energy in this process likely uses sodium ion gradients for ATP synthesis and is coupled to quantitative sulfide methylation.
aerobic respiration, using carbon monoxide as electron donor
The metabolic process in which ferrous ions (Fe2+) are oxidized to ferric ions (Fe3+) to generate energy, coupled to the reduction of carbon dioxide.
aerobic respiration, using ferrous ions as electron donor
The chemical reactions and pathways resulting in the conversion of thiosulfate to tetrathionate, using cytochrome c as an electron acceptor.
polythionate oxidation
The chemical reactions and pathways resulting in the breakdown of L-alanine to D-lactate and ammonia.
L-alanine oxidation to D-lactate and ammonia
The chemical reactions and pathways resulting in the breakdown of L-alanine to pyruvate, with D-alanine as an intermediate.
L-alanine oxidation to pyruvate via D-alanine
A one-carbon metabolic process in which acetyl-CoA is produced from formaldehyde and carbon dioxide.
serine-isocitrate lyase pathway
The chemical reactions and pathways resulting in the conversion of n-octane to octanoyl-CoA.
n-octane oxidation
The directed movement of cellobiose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Cellobiose, or 4-O-beta-D-glucopyranosyl-D-glucose, is a disaccharide that represents the basic repeating unit of cellulose.
cellobiose transport
Enables the transfer of ferric-vibriobactin ions from one side of a membrane to the other.
ferric-vibriobactin transmembrane transporter activity
The chemical reactions and pathways resulting in the breakdown of arginine into other compounds, including ornithine and CO2, using the enzyme arginine deiminase.
arginine deiminase pathway
The chemical reactions and pathways resulting in the breakdown of phenylalanine under anaerobic conditions; occurs via the intermediates phenylpyruvate and phenylacetaldehyde.
anaerobic phenylalanine oxidation
The degradation of toluene to form pyruvate and acetaldehyde; the first step in the pathway is the oxidation of toluene to form 2-hydroxytoluene (o-cresol).
toluene oxidation via 2-hydroxytoluene
The degradation of toluene to form pyruvate and acetaldehyde; the first step in the pathway is the oxidation of toluene to form 3-hydroxytoluene (m-cresol).
toluene oxidation via 3-hydroxytoluene
The degradation of toluene to form p-hydroxybenzoate; the first step in the pathway is the oxidation of toluene to form 4-hydroxytoluene (4-cresol).
toluene oxidation via 4-hydroxytoluene
The formation from toluene of catechol, dihydroxybenzene, by successive oxidations followed by loss of carbon dioxide (CO2).
toluene oxidation to catechol
A process in which a series of electron carriers operate together to transfer electrons from donors such as NADH and FADH2 to any of several different terminal electron acceptors other than oxygen to generate a transmembrane electrochemical gradient.
anaerobic electron transport chain
The anaerobic chemical reactions and pathways resulting in the breakdown of acetate, yielding energy in the form of ATP.
acetate fermentation
The anaerobic chemical reactions and pathways resulting in the breakdown of ethanol and acetate to butyrate and caproate, yielding energy in the form of ATP.
ethanol-acetate fermentation to butyrate and caproate