LLukas22/scidocs huggingface dataset:
Fast Template Matching

Although it is well known that cross correlation can be efficiently implemented in the transform domain, the normalized form of cross correlation preferred for template matching applications does not have a simple frequency domain expression. Normalized cross correlation is usually computed in the spatial domain for this reason. This short paper shows that unnormalized cross correlation can be efficiently normalized using precomputed tables containing the integral of the image and image over the search window. 1 Template Matching by Cross Correlation Correlation is an important tool in image processing, pattern recognition, and other fields. The correlation between two signals (cross correlation) is a standard approach to feature detection [1, 2] as well as a building block for more sophisticated recognition techniques (e.g. [3]). Textbook presentations of correlation commonly mention the convolution theorem and the attendant possibility of efficiently computing correlation in the frequency domain via the fast Fourier transform. Unfortunately the normalized form of correlation (correlation coefficient) preferred in many applications does not have a correspondingly simple and efficient frequency domain expression, and spatial domain implementation is recommended instead (e.g. [2], p. 585; also see e.g. [4] sections 13.2 and 14.5). This paper shows that the unnormalized correlation can be efficiently normalized using using precomputed tables of the integral of the signal and signal, i.e., summed-area tables [5]. Template matching techniques [1] attempt to answer some variation of the following question: Does the image contain a specified view of some feature, and if so, where? The use of cross correlation for template matching is motivated by the distance measure (squared Euclidean distance)
Remote Timing Attacks Are Practical

Timing attacks are usually used to attack weak computing devices such as smartcards. We show that timing attacks apply to general software systems. Specifically, we devise a timing attack against OpenSSL. Our experiments show that we can extract private keys from an OpenSSL-based web server running on a machine in the local network. Our results demonstrate that timing attacks against network servers are practical and therefore security systems should defend against them.
Probiotic supplementation with Lactobacillus plantarum and Pediococcus acidilactici for Helicobacter pylori therapy: A randomized, double-blind, placebo-controlled trial.

OBJECTIVE
To evaluate the safety, tolerability and efficacy of a probiotic supplementation for Helicobacter pylori (H. pylori) eradication therapy.


DESIGN
Consecutive adult naive patients with a diagnosis of H. pylori infection who were prescribed eradication therapy according to clinical practice (10-day triple or nonbismuth quadruple concomitant therapy) randomly received probiotics (1 × 109 colony-forming units each strain, Lactobacillus plantarum and Pediococcus acidilactici) or matching placebo. Side effects at the end of the treatment, measured through a modified De Boer Scale, were the primary outcome. Secondary outcomes were compliance with therapy and eradication rates.


RESULTS
A total of 209 patients (33% triple therapy, 66% non-bismuth quadruple therapy) were included [placebo (n = 106) or probiotic (n = 103)]. No differences were observed regarding side effects at the end of the treatment between groups (β -0.023, P 0.738). Female gender (P < 0.001) and quadruple therapy (P 0.007) were independent predictors of side effects. No differences in compliance were observed, regardless of the study group or eradication therapy. Eradication rates were similar between groups [placebo 95% (95% confidence interval (CI), 89% to 98%) vs probiotic 97% (95% CI, 92% to 99%), P 0.721]. There were no relevant differences in cure rates (>90% in all cases) between triple and quadruple concomitant therapy.


CONCLUSION
Probiotic supplementation containing Lactobacillus Plantarum and Pediococcus acidilactici to H. pylori treatment neither decreased side effects nor improved compliance with therapy or eradication rates.
Recent environmental change in North African wetland lakes: diatom and other stratigraphic evidence from nine sites in the CASSARINA Project

All nine wetland lakes in the CASSARINA North African suite of sample sites have been disturbed strongly by human activity during the 20th century. Dated lake sediment core were used to provide evidence of the extent of recent environmental change at each site. Sedimentary diatoms at seven sites were useful for inferring salinity change trends during the last century. At two sites preservation problems severely degraded the sedimentary diatom record. Sediment core integrity was otherwise established. Lithostratigraphic measurements indicated some site specific changes in soil erosion and sediment composition but, for the Egyptian Delta lakes, no physical signal synchronous with Aswan High Dam construction was found. Sedimentary diatom assemblages were generally site characteristic and halophilous taxa were common. At two sites planktonic diatoms indicated some recent eutrophication but generally the assemblages were more indicative of salinity changes. Diatom-inferred salinity trends for the seven sites typically indicated that reductions in water salinity occurred sometime during the early or mid 20th century. Rather than climate, hydrological modification of water resources is implicated as the primary driver of salinity changes during most of the 20th century. In the western North African region these modifications were mainly local land drainage and water diversion programmes to alleviate winter flooding and/or promote summer water availability. In the Delta region, the Nile has been intensively exploited since antiquity and intensively so from the late 19th century to release more fresh water for agriculture. Here, diatom records indicate that freshening began well before the Aswan High Dam but salinity fluctuations have tended to diminish during the latter part of the 20th century. A small reversal in the water freshening trend in the 1980/90s was possibly a response to land subsidence/sea-level change or to reduced freshwater supply. Freshwater supply to the sites is generally diminishing as former freshwater surpluses switch to deficit. One site (Merja Bokka, Morocco) became completely dry in 1998 as agriculture encroached and Megene Chitane, the only acid lake in Tunisia, is currently affected by excessive inflow abstraction. At the beginning of the 21st century, eight of the nine CASSARINA sites persist as viable but modified aquatic ecosystems. They nevertheless continue to support valuable aquatic biodiversity, especially in the Delta sites and in Chitane. The modern diatom communities are clearly tolerant of considerable environmental change but the remaining sites are increasingly threatened by major hydrological disturbance. Base-line floristic data for the late 20th century are given but continuous biomonitoring combined with effective management is needed urgently to help conserve North Africa's diminishing natural wetland lake resources.
Hume the Moral Historian: Queen Elizabeth I

Abstract Hume was accused of partiality as soon as the first volume of his Histories reached the public. No better test can be found for whether he was partial than by looking at how he writes of Queen Elizabeth I. If his history is biased, we would expect her sex to make a difference to the history. We shall find, however, that Hume treats Elizabeth as a rational being who is a sovereign, and that he achieves, insofar as he describes her reign, the general point of view appropriate to the impartiality demanded of historians. We shall also find evidence that he did not give up on his grand project to provide the foundations for “a compleat system of the sciences” after the Treatise failed to excite a murmur. His Histories , using the method of causal analysis common to all his works, illustrate not only his moral theory but also, for instance, his claim that we can find laws in political systems as certain as those of physics.
Bootstrapping relation extraction from semantic seeds

Information Extraction (IE) is a technology for localizing and classifying pieces of relevant information in unstructured natural language texts and detecting relevant relations among them. This thesis deals with one of the central tasks of IE, i.e., relation extraction. The goal is to provide a general framework that automatically learns mappings between linguistic analyses and target semantic relations, with minimal human intervention. Furthermore, this framework is supposed to support the adaptation to new application domains and new relations with various complexities. The central result is a new approach to relation extraction which is based on a minimally supervised method for automatically learning extraction grammars from a large collection of parsed texts, initialized by some instances of the target relation, called semantic seed. Due to the semantic seed approach, the framework can accommodate new relation types and domains with minimal effort. It supports relations of different arity as well as their projections. Furthermore, this framework is general enough to employ any linguistic analysis tools that provide the required type and depth of analysis. The adaptability and the scalability of the framework is facilitated by the DARE rule representation model which is recursive and compositional. In comparison to other IE rule representation models, e.g., Stevenson and Greenwood (2006), the DARE rule representation model is expressive enough to achieve good coverage of linguistic constructions for finding mentions of the target relation. The powerful DARE rules are constructed via a bottom-up and compositional rule discovery strategy, driven by the semantic seed. The control of the quality of newly acquired knowledge during the bootstrapping process is realized through a ranking and filtering strategy, taking two aspects into account: the domain relevance and the trustworthiness of the origin. A spe-
Effect of different cooking conditions on the profiles of Maillard reaction products and nutrient composition of hairtail (Thichiurus lepturus) fillets.

Much attention has been given to investigate the formation of Maillard reaction products in thermal processing food due to potential health risks. This study aimed to the profiles of Maillard reaction products (MRPs) and changes of nutrient composition in hairtail (Thichiurus lepturus) fillets prepared by three cooking method: boiling, baking and frying. The Nε-carboxymethyllysine (CML) level ranged from non-detectable to 4.24mg/100g protein and furosine ranged from 4.25 to 20.95mg/100g protein. The levels of CML and furosine in boiled hairtail fillets were much lower than baked and fried ones. The formation of CML was only affected by the cooking method. The changes of the lipid and moisture content, and thiobarbituric acid-reactive substances (TBARS) content in cooked hairtail fillet had different effects on the formation of different stages of Maillard reaction. Furosine level significantly correlated with absorbance in 420nm (r=0.74, p<0.05) and 280nm (r=0.73, p<0.05) and fluorescence Intensity (FI) (r=0.65, p<0.05), but did not correlate with CML. The CML level linearly correlated with the moisture (r=0.79, p<0.01) and lipid content (r=0.73, p<0.05), and the formation of TBARS value (r=0.92, p<0.01), but did not correlate with the FI. Overall, the findings may help to better control the cooking conditions of hairtail meat based on the profiles of MRPs.
Contactless EMG sensors embroidered onto textile

To obtain maximum unobtrusiveness with sensors for monitoring health parameters on the human body, two technical solutions are combined. First we propose contactless sensors for capacitive electromyography measurements. Secondly, the sensors are integrated into textile, so complete fusion with a wearable garment is enabled. We are presenting the first successful measurements with such sensors. Keywords— surface electromyography, capacitive transducer, embroidery, textile electronics, interconnect
Interactive Exposure With a Blood Glucose Monitor With a Novel Glucose Color Range Indicator Is Associated With Improved Glucose Range Interpretation and Awareness in Patients With Type 2 Diabetes.

AIMS
The ability of patients to achieve glycemic control depends in part on their ability to interpret and act on blood glucose (BG) results. This clinical study was conducted to determine if a simple on-meter color range indicator (CRI) could improve the ability of patients to categorize BG values into low, in-range, and high glycemic ranges.


METHODS
The clinical study was conducted in 59 subjects with type 2 diabetes (T2DM). Subjects classified 50 general, 15 before- and 15 after-meal BG values as low, in-range, or high based on their current knowledge. Subjects then interactively experienced the on-meter CRI, which showed whether alternate BG values were low, in-range, or high. After CRI interaction, subjects repeated the original scoring assessment followed by a survey exploring their awareness of glucose ranges.


RESULTS
Following interaction with the CRI, subjects improved their ability to categorize general, before-meal and after-meal BG results by 23.4% ± 3.0% (SEM), 14.2% ± 2.4%, and 16.1% ± 2.9%, respectively (all P < .001), into low, in-range, and high glycemic ranges. Improvement was not accompanied by an increase in time spent categorizing results. There was no correlation between subject HbA1c, test frequency, or duration of diabetes and ability to correctly classify results. Subjects agreed the CRI feature helped them easily interpret glucose values and improved their awareness of glucose ranges.


CONCLUSION
A short interactive session with a meter including a CRI feature improved the ability of T2DM subjects to interpret and categorize BG values into recommended ranges.
Micro-patterned surfaces reduce bacterial colonization and biofilm formation in vitro: Potential for enhancing endotracheal tube designs

BACKGROUND
Ventilator-associated pneumonia (VAP) is a leading hospital acquired infection in intensive care units despite improved patient care practices and advancements in endotracheal tube (ETT) designs. The ETT provides a conduit for bacterial access to the lower respiratory tract and a substratum for biofilm formation, both of which lead to VAP. A novel microscopic ordered surface topography, the Sharklet micro-pattern, has been shown to decrease surface attachment of numerous microorganisms, and may provide an alternative strategy for VAP prevention if included on the surface of an ETT. To evaluate the feasibility of this micro-pattern for this application, the microbial range of performance was investigated in addition to biofilm studies with and without a mucin-rich medium to simulate the tracheal environment in vitro.


METHODS
The top five pathogens associated with ETT-related pneumonia, Methicillin-Resistant Staphylococcus aureus (MRSA), Pseudomonas aeruginosa, Klebsiella pneumonia, Acinetobacter baumannii, and Escherichia coli, were evaluated for attachment to micro-patterned and un-patterned silicone surfaces in a short-term colonization assay. Two key pathogens, MRSA and Pseudomonas aeruginosa, were evaluated for biofilm formation in a nutrient rich broth for four days and minimal media for 24 hours, respectively, on each surface type. P. aeruginosa was further evaluated for biofilm formation on each surface type in a mucin-modified medium mimicking tracheal mucosal secretions. Results are reported as percent reductions and significance is based on t-tests and ANOVA models of log reductions. All experiments were replicated at least three times.


RESULTS
Micro-patterned surfaces demonstrated reductions in microbial colonization for a broad range of species, with up to 99.9% (p < 0.05) reduction compared to un-patterned controls. Biofilm formation was also reduced, with 67% (p = 0.12) and 52% (p = 0.05) reductions in MRSA and P. aeruginosa biofilm formation, respectively. Further, a 58% (p < 0.01) reduction was demonstrated on micro-patterned surfaces for P. aeruginosa biofilms under clinically-simulated conditions when compared to un-patterned controls.


CONCLUSIONS
This engineered micro-pattern reduces the colonization and biofilm formation of key VAP-associated pathogens in vitro. Future application of this micro-pattern on endotracheal tubes may prevent or prolong the onset of VAP without the need for antimicrobial agents.
Feminist Family Politics

The ion debates about the on nature the PaCS of families. in France Particularly have occasioned vexing an has outpouring been the question of opinion a out the nature of families. Particularly ve ng has been the uesti n of the status of same-sex couples. For purposes of inheritance and other legal questions, same-sex partnerships may be recognized as "unions" governed by certain contractual arrangements, but the line has been drawn at calling these unions "families" because of the question of children. All manner of expert testimony has been brought to bear on the matter of "lineage" and "kinship," most of it seeking to prove that there is something either unnatural, culturally deviant, and/or psychologically damaging about children being born to or raised by two parents of the same sex. Some have written of the "right" of children to live in heterosexual families; others have objected to homosexual parenting as a distortion of the facts of nature. Sylviane Agacinski put it this way, "Je ne crois pas qu'il serait bon, pour les enfants a venir, d'instaurer une filiation asexuee ou homosexuelle qui effacerait le fait que tout etre humain est issu d'un homme et d'une femme."1
Efficacy and safety of milnacipran 100 mg/day in patients with fibromyalgia: results of a randomized, double-blind, placebo-controlled trial.

OBJECTIVE
To assess the efficacy and safety of milnacipran at a dosage of 100 mg/day (50 mg twice daily) for monotherapy treatment of fibromyalgia.


METHODS
A double-blind, placebo-controlled trial was performed to assess 1,025 patients with fibromyalgia who were randomized to receive milnacipran 100 mg/day (n = 516) or placebo (n = 509). Patients underwent 4-6 weeks of flexible dose escalation followed by 12 weeks of stable-dose treatment. Two composite responder definitions were used as primary end points to classify the response to treatment. The 2-measure composite response required achievement of ≥30% improvement from baseline in the pain score and a rating of "very much improved" or "much improved" on the Patient's Global Impression of Change (PGIC) scale. The 3-measure composite response required satisfaction of these same 2 improvement criteria for pain and global status as well as improvement in physical function on the Short Form 36 (SF-36) physical component summary (PCS) score.


RESULTS
After 12 weeks of stable-dose treatment, a significantly greater proportion of milnacipran-treated patients compared with placebo-treated patients showed clinically meaningful improvements, as evidenced by the proportion of patients meeting the 2-measure composite responder criteria (P < 0.001 in the baseline observation carried forward [BOCF] analysis) and 3-measure composite responder criteria (P < 0.001 in the BOCF). Milnacipran-treated patients also demonstrated significantly greater improvements from baseline on multiple secondary outcomes, including 24-hour and weekly recall pain score, PGIC score, SF-36 PCS and mental component summary scores, average pain severity score on the Brief Pain Inventory, Fibromyalgia Impact Questionnaire total score (all P < 0.001 versus placebo), and Multidimensional Fatigue Inventory total score (P = 0.036 versus placebo). Milnacipran was well tolerated by most patients, with nausea being the most commonly reported adverse event (placebo-adjusted rate of 15.8%).


CONCLUSION
Milnacipran administered at a dosage of 100 mg/day improved pain, global status, fatigue, and physical and mental function in patients with fibromyalgia.
New Media, New Audiences?

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Performance-Based Pricing of Frequency Regulation in Electricity Markets

The emergence of high penetration of renewable energy sources in the energy mix of power systems has substantially increased the need for faster-ramping resources participating in the frequency regulation service procured via market mechanisms by the system operators. However, current market mechanisms do not properly align the incentives for participation since resources are not compensated for the actual frequency regulation they provide nor for the accuracy with which they follow the automatic generation control (AGC) dispatch signal. In this paper, we evaluate the current mechanisms for procuring, dispatching and compensating resources for the frequency regulation service. We also propose a comprehensive approach for calculating the performance payment that includes the actual service they provide and the accuracy with which they follow the AGC signal. Finally, we perform a study by deploying actual operational AGC data for analyzing the proposed methodology.
Optimal allocation of test resources for software reliability growth modeling in software development

Component-based software development approach has become a trend in integrating modern software systems. To ensure the overall reliability of an integrated software system, its software components have to meet certain reliability requirements, subject to some testing schedule and resource constraints. Efficiency improvement of the system-testing can be formulated as a combinatorial optimization problem with known cost, reliability, effort, and other attributes of the system components. This paper considers “software component testing resource allocation” for a system with single or multiple applications, each with a pre-specified reliability requirement. The relation between failure rates of components and “cost to decrease this rate” is modeled by various types of reliability-growth curves. Closed-form solutions to the problem for systems with one single application are developed, and then “how to solve the multiple application problem using nonlinear programming techniques” are described. Also examined are the interactions between the system components, and inter-component failure dependencies are included in the modeling formula. In addition to regular systems, the technique is extended to address fault-tolerant systems. A procedure for a systematic approach to the testing resource allocation problem is developed, and its application in a case study of a telecommunications software system is described. This procedure is automated in a reliability allocation tool for an easy specification of the problem and an automatic application of the technique. This methodology gives the basic approach to optimization of testing schedules, subject to reliability constraints. This adds “interesting new optimization opportunities in the software testing phase” to the existing optimization literature that is concerned with structural optimization of the software architecture. Merging these two approaches improves the reliability planning accuracy in component-based software development.