LLukas22/scidocs huggingface dataset:
Geographic intention and modification in web search

Web searchers signal their geographic intent by using place-names in search queries. They also indicate their flexibility about geographic specificity by reformulating their queries. By examining this data we can learn to understand web searcher flexibility with respect to geographic intent. We examine aggregated data of queries with locations, and locations identified from IP addresses, to identify overall distance preferences, as well as distance preferences by search topic. We also examine query rewriting: both deliberate query rewriting, conducted in web search sessions, and automated query rewriting, with manual relevance judgements of geo-modified queries. We find geo-specification in 12.7% of user query rewrites in search sessions, and show the breakdown into sub-classes such as same-city, same-state, same-country and different-country. We also measure the dependence between US-state-name and distance-of-modified-location-from-original-location, finding that Vermont web searchers modify their locations greater distances than California web searchers. We find that automatically-modified queries are perceived as much more relevant when the geographic component is unchanged. We look at the relationship between the non-location part of a query and the distance from the user. We see that people search for child day-care near their locations and maps far from where they are located. We also give distance profiles for the top topics which cooccur with place-names in queries, which could be used to set document priors based on document proximity and query topic.
Doping-induced strain in heavily B-doped (100) diamond films prepared by hot-filament chemical vapor deposition

Abstract Diamond semiconductor has attracted attention for use in next-generation high-power, low-loss, high-radiation proof power devices. Heavily B-doping of diamond produces low-resistivity contacts that enhance the maximum output current, however, unintended lattice strain cause defect formations, degrading the device performance. In this study, we investigated the doping-induced lattice strain of heavily B-doped (100) films fabricated by hot-filament chemical vapor deposition. X-ray reciprocal space mapping indicated coherent, pseudomorphic growth between film and substrate. The perpendicular lattice strain as a function of B concentration followed Vegard's law, which accounts for substitutional incorporation. Synchrotron X-ray absorption fine structure showed no signature of lower-coordinated B-clusters. We believe that maintaining pseudomorphic growth is a key factor in suppressing electrically non-active B impurities.
Value of routine monitoring of bone mineral density after starting bisphosphonate treatment: secondary analysis of trial data

OBJECTIVE
To assess the value of monitoring response to bisphosphonate treatment by means of measuring bone mineral density.


DESIGN
Secondary analysis of trial data using mixed models. Data source The Fracture Intervention Trial, a randomised controlled trial that compared the effects of alendronate and placebo in 6459 postmenopausal women with low bone mineral density recruited between May 1992 and May 1993. Bone density measurements of hip and spine were obtained at baseline and at one, two, and three years after randomisation.


MAIN OUTCOME MEASURES
Between-person (treatment related) variation and within-person (measurement related) variation in hip and spine bone mineral density.


RESULTS
The mean effect of three years' treatment with alendronate was to increase hip bone mineral density by 0.030 g/cm(2). There was some between-person variation in the effects of alendronate, but this was small in size compared with within-person variation. Alendronate treatment is estimated to result in increases in hip bone density >or=0.019 g/cm(2) in 97.5% of patients.


CONCLUSIONS
Monitoring bone mineral density in postmenopausal women in the first three years after starting treatment with a potent bisphosphonate is unnecessary and may be misleading. Routine monitoring should be avoided in this early period after bisphosphonate treatment is commenced.
Return to Sports for Professional Baseball Players After Surgery of the Shoulder or Elbow

BACKGROUND
The purpose of this study was to assess major and minor league baseball players' return to professional baseball at a preinjury level or higher after surgery of the shoulder or elbow.


HYPOTHESIS
The majority of athletes will be able to return to their preinjury level after surgery.


STUDY DESIGN
Case series.


METHODS
Over a 4-season period, prospective injury and surgery records were reviewed for one professional baseball club. Forty-four players underwent 51 procedures (28 shoulder and 23 elbow) by multiple experienced surgeons; 7 players underwent more than 1 procedure.


RESULTS
Twenty-eight shoulder surgeries were performed on 27 players: 19 pitchers and 8 position players. The majority of the procedures were labral repairs (n = 21). Nine players returned to their preoperative level; 2 advanced to a higher level; 5 returned to a lower level; and 11 retired from professional baseball. Only 2 of the 12 players at the high professional level (Major League Baseball, triple-A, double-A) returned to the same level. Twenty-three elbow surgeries were performed on 21 players (20 pitchers). The majority of the procedures were ulnar collateral ligament reconstructions (n = 12). Seven players returned to their preoperative level; 4 advanced to a higher level; 4 returned to a lower level; and 6 retired from professional baseball. Of the 12 players at the high professional level, 3 returned to the same or higher level.


CONCLUSION
Following surgery, 21 of 44 players (48%) returned to the same or higher level of professional baseball. For those players performing at a high professional level, 5 of 22 (23%) returned to the same or higher level. Return to the same or higher level was more likely with elbow surgery than with shoulder surgery.


CLINICAL RELEVANCE
Elite throwing athletes may not return to the same level at a high rate following shoulder or elbow surgery.
An extended risk assessment approach for chemical plants applied to a study related to pipe ruptures

Risk assessments and Quantitative Risk Assessment (QRA) in particular have been used in the chemical industry for many years to support decision-making on the choice of arrangements and measures associated with chemical processes, transportation and storage of dangerous substances. The assessments have been founded on a risk perspective seeing risk as a function of frequency of events (probability) and associated consequences. In this paper we point to the need for extending this approach to place a stronger emphasis on uncertainties. A recently developed risk framework designed to better reflect such uncertainties is presented and applied to a chemical plant and specifically the analysis of accidental events related to the rupture of pipes. Two different ways of implementing the framework are presented, one based on the introduction of probability models and one without. The differences between the standard approach and the extended approaches are discussed from a theoretical point of view as well as from a practical risk analyst perspective. & 2011 Elsevier Ltd. All rights reserved.
Direct impingement cooling of LED by Piezo fan

In this paper, an innovative heat management solution for the Light Emitting Diodes (LEDs) based on direct impingement cooling by Piezo fan has been proposed and evaluated. Round Piezo fans with 26 to 30 mm blade diameter, 1 to 5 mm fan thickness and narrow flow orifice (~ 3 to 7.5 mm) were developed which could provide very high velocity air jet (> 10 m/s) for impinging heat source footprint directly. These fans were driven at high operating frequency (300 to 550 Hz) and voltage (40 to 50 Vrms) to get high impact air jet at fan outlet. Different test cases have been studied to demonstrate and characterize the cooling capability of the Piezo fan based thermal solutions. Direct impingement cooling of the 5 × 5 mm2 heat source with Piezo fan (30 mm diameter, 1.1 mm thickness and 7.5 mm orifice width) inclined at 35° to horizontal was tested which was able to reduce source temperature by 3 to 4 times as compared to natural convection cooling. Similarly, incorporation of Piezo fan for cooling multiple chips (x5) LED package with 9 W output heat load reduced the source temperature by more than 42 °C. Automotive headlamp with two LED packages and single heat sink was impinge cooled by two dedicated Piezo fans which reduce the source temperature by 7.6 °C and enhance the heat sink heat dissipation capacity by 48% due to improvement in the enclosure heat transfer coefficient. Piezo based impingement cooling can therefore increase the heat removal from heat source as well as can reduce the size of the heat sink designed for natural convection cooling. Based on these results, impingement type Piezo fan can be classified as standalone as well as heat sink integrated cooling solution for LED packages.
A study of the bactericidal, anti-biofouling, cytotoxic and antioxidant properties of actinobacterially synthesised silver nanoparticles.

Actinobacteria- mediated synthesis of silver nanoparticles (AgNPs) is a reliable, eco-friendly and important aspect of nanobiotechnology. In this study, aqueous silver ions, which were exposed to an actinobacterial biomass of Streptomyces naganishii (MA7), were reduced to form stable AgNPs under optimised conditions. The microbially synthesised AgNPs were characterised by UV-Vis spectroscopy, Fourier transform infrared (FT-IR) spectroscopy, X-ray diffraction (XRD), selected area electron diffraction (SAED), energy dispersive X-ray spectroscopy (EDX), scanning electron microscopy (SEM), atomic force microscopy (AFM) and high- resolution transmission electron microscopy (HR-TEM). The size (5-50 nm) and shape (spherical) of the AgNPs were determined. The biosynthesised AgNPs exhibited good bactericidal, anti-biofouling, antioxidant and cytotoxic effects with regards to the HeLa cell line. A single protein band with a molecular weight of 44 kDa was obtained after partial purification of the culture filtrate via polyacrylamide gel electrophoresis. The potent actinobacterial strain was identified by its molecular (16s rRNA sequencing), phenotypic and cultural characteristics. The current study demonstrated the potential use of the extremophilic actinobacterial strain of S. naganishii (MA7) as a novel source for AgNPs synthesis with improved biomedical applications.
Evaluation Techniques for Biometrics-Based Authentication Systems (FRR)

Biometrics-based authentication is becoming popular because of increasing ease-of-use and reliability. Performance evaluation of such systems is an important issue. We attempt to address two aspects of performance evaluation that have been conventionally neglected. First, the “difficulty” of the data that is used in a study influences the evaluation results. We propose some measures to characterize the data set so that the performance of a given system on different data sets can be compared. Second, conventional studies often have reported the false reject and false accept rates in the form of match score distributions. However, no confidence intervals are computed for these distributions, hence no indication of the significance of the estimates is given. In this paper, we systematically study and compare parametric and nonparametric (bootstrap) methods for measuring confidence intervals. We give special attention to false reject rate estimates.
Guidelines for establishing a quality improvement program in interventional radiology.

THE membership of the Society of Interventional Radiology (SIR) Standards of Practice Committee represents experts in a broad spectrum of interventional procedures from both the private and academic sectors of medicine. Generally Standards of Practice Committee members dedicate the vast majority of their professional time to performing interventional procedures; as such they represent a valid broad expert constit-
Pre-training perceived wellness impacts training output in Australian football players.

The impact of perceived wellness on a range of external load parameters, rating of perceived exertion (RPE) and external load:RPE ratios, was explored during skill-based training in Australian footballers. Fifteen training sessions involving 36 participants were analysed. Each morning before any physical training, players completed a customised perceived wellness questionnaire (sleep quality, fatigue, stress, mood and muscle soreness). Microtechnology devices provided external load (average speed, high-speed running distance, player load and player load slow). Players provided RPE using the modified Borg category-ratio 10 RPE scale. Mixed-effect linear models revealed significant effects of wellness Z-score on player load and player load slow. Effects are reported with 95% confidence limits. A wellness Z-score of -1 corresponded to a -4.9 ± 3.1 and -8.6 ± 3.9% reduction in player load and player load slow, respectively, compared to those without reduced wellness. Small significant effects were also seen in the average speed:RPE and player load slow:RPE models. A wellness Z-score of -1 corresponded to a 0.43 ± 0.38 m·min(-1) and -0.02 ± 0.01 au·min(-1) change in the average speed:RPE and player load slow:RPE ratios, respectively. Magnitude-based analysis revealed that the practical size of the effect of a pre-training perceived wellness Z-score of -1 would have on player load slow was likely negative. The results of this study suggests that monitoring pre-training perceived wellness may provide coaches with information about the intensity of output that can be expected from individual players during a training session.
A lane-departure identification based on LBPE, Hough transform, and linear regression

This paper presents a lane-departure identification (LDI) system of a traveling vehicle on a structured road with lane marks. As is the case with modified version of the previous EDFbased LDI approach [J.W. Lee, A machine vision system for lane-departure detection, CVIU 86 (2002) 52–78], the new system increases the number of lane-related parameters and introduces departure ratios to determine the instant of lane departure and a linear regression (LR) to minimize wrong decisions due to noise effects. To enhance the robustness of LDI, we conceive of a lane boundary pixel extractor (LBPE) capable of extracting pixels expected to be on lane boundaries. Then, the Hough transform utilizes the pixels from the LBPE to provide the lane-related parameters such as an orientation and a location parameter. The fundamental idea of the proposed LDI is based on an observation that the ratios of orientations and location parameters of leftand right-lane boundaries are equal to one as far as the optical axis of a camera mounted on a vehicle is coincident with the center of lane. The ratios enable the lanerelated parameters and the symmetrical property of both lane boundaries to be connected. In addition, the LR of the lane-related parameters of a series of successive images plays the role of determining the trend of a vehicle s traveling direction and the error of the LR is used to avoid a wrong LDI. We show the efficiency of the proposed LDI system with some real images. 2005 Elsevier Inc. All rights reserved. 1077-3142/$ see front matter 2005 Elsevier Inc. All rights reserved. doi:10.1016/j.cviu.2005.03.002 * Corresponding author. Fax: +82 62 53
Mice in Bion-M 1 Space Mission: Training and Selection

After a 16-year hiatus, Russia has resumed its program of biomedical research in space, with the successful 30-day flight of the Bion-M 1 biosatellite (April 19-May 19, 2013). The principal species for biomedical research in this project was the mouse. This paper presents an overview of the scientific goals, the experimental design and the mouse training/selection program. The aim of mice experiments in the Bion-M 1 project was to elucidate cellular and molecular mechanisms, underlying the adaptation of key physiological systems to long-term exposure in microgravity. The studies with mice combined in vivo measurements, both in flight and post-flight (including continuous blood pressure measurement), with extensive in vitro studies carried out shortly after return of the mice and in the end of recovery study. Male C57/BL6 mice group housed in space habitats were flown aboard the Bion-M 1 biosatellite, or remained on ground in the control experiment that replicated environmental and housing conditions in the spacecraft. Vivarium control groups were used to account for housing effects and possible seasonal differences. Mice training included the co-adaptation in housing groups and mice adaptation to paste food diet. The measures taken to co-adapt aggressive male mice in housing groups and the peculiarities of "space" paste food are described. The training program for mice designated for in vivo studies was broader and included behavioral/functional test battery and continuous behavioral measurements in the home-cage. The results of the preliminary tests were used for the selection of homogenous groups. After the flight, mice were in good condition for biomedical studies and displayed signs of pronounced disadaptation to Earth's gravity. The outcomes of the training program for the mice welfare are discussed. We conclude that our training program was effective and that male mice can be successfully employed in space biomedical research.
Bare bones differential evolution

Article history: Received 22 August 2007 Accepted 29 February 2008 Available online xxxx
Light-induced phosphorylation and degradation of the negative regulator PHYTOCHROME-INTERACTING FACTOR1 from Arabidopsis depend upon its direct physical interactions with photoactivated phytochromes.

The phytochrome (phy) family of photoreceptors regulates changes in gene expression in response to red/far-red light signals in part by physically interacting with constitutively nucleus-localized phy-interacting basic helix-loop-helix transcription factors (PIFs). Here, we show that PIF1, the member with the highest affinity for phys, is strongly sensitive to the quality and quantity of light. phyA plays a dominant role in regulating the degradation of PIF1 following initial light exposure, while phyB and phyD and possibly other phys also influence PIF1 degradation after prolonged illumination. PIF1 is rapidly phosphorylated and ubiquitinated under red and far-red light before being degraded with a half-life of approximately 1 to 2 min under red light. Although PIF1 interacts with phyB through a conserved active phyB binding motif, it interacts with phyA through a novel active phyA binding motif. phy interaction is necessary but not sufficient for the light-induced phosphorylation and degradation of PIF1. Domain-mapping studies reveal that the phy interaction, light-induced degradation, and transcriptional activation domains are located at the N-terminal 150-amino acid region of PIF1. Unlike PIF3, PIF1 does not interact with the two halves of either phyA or phyB separately. Moreover, overexpression of a light-stable truncated form of PIF1 causes constitutively photomorphogenic phenotypes in the dark. Taken together, these data suggest that removal of the negative regulators (e.g., PIFs) by light-induced proteolytic degradation might be sufficient to promote photomorphogenesis.
Optimal Schemes for Robust Web Extraction

In this paper, we consider the problem of constructing wrappers for web information extraction that are robust to changes in websites. We consider two models to study robustness formally: the adversarial model, where we look at the worst-case robustness of wrappers, and probabilistic model, where we look at the expected robustness of wrappers, as web-pages evolve. Under both models, we present efficient algorithms for constructing the provably most robust wrapper. By evaluating on real websites, we demonstrate that in practice, our algorithms are highly effective in coping up with changes in websites, and reduce the wrapper breakage by up to 500% over existing techniques.
Effect of mirthful laughter on vascular function.

In contrast to the well-established scientific evidence linking negative emotional states (e.g., depression, anxiety, or anger) to increased risk for cardiovascular disease, much less is known about the association between positive emotional states (e.g., laughter, happiness) and cardiovascular health. We determined the effects of mirthful laughter, elicited by watching comic movies, on endothelial function and central artery compliance. Seventeen apparently healthy adults (23 to 42 years of age) watched 30 minutes of a comedy or a documentary (control) on separate days (crossover design). Heart rate and blood pressure increased significantly while watching the comedy, whereas no such changes were seen while watching the documentary. Ischemia-induced brachial artery flow-mediated vasodilation (by B-mode ultrasound imaging) increased significantly after watching the comedy (17%) and decreased with watching the documentary (-15%). Carotid arterial compliance (by simultaneous application of ultrasound imaging and applanation tonometry) increased (10%) significantly immediately after watching the comedy and returned to baseline 24 hours after the watching, whereas it did not change significantly throughout the documentary condition. Comedy-induced changes in arterial compliance were significantly associated with baseline flow-mediated dilation (r = 0.63). These results suggest that mirthful laughter elicited by comic movies induces beneficial impact on vascular function.
Psychometric properties of the Penn Computerized Neurocognitive Battery.

OBJECTIVE
The Penn Computerized Neurocognitive Battery (CNB) was designed to measure performance accuracy and speed on specific neurobehavioral domains using tests that were previously validated with functional neuroimaging. The goal of the present study was to evaluate the neuropsychological theory used to construct the CNB by confirming the factor structure of the tests composing it.


METHOD
In a large community sample (N = 9,138; age range 8-21), we performed a correlated-traits confirmatory factor analysis (CFA) and multiple exploratory factor analyses (EFAs) on the 12 CNB measures of Efficiency (which combine Accuracy and Speed). We then performed EFAs of the Accuracy and Speed measures separately. Finally, we performed a confirmatory bifactor analysis of the Efficiency scores. All analyses were performed with Mplus using maximum likelihood estimation.


RESULTS
RESULTS strongly support the a priori theory used to construct the CNB, showing that tests designed to measure executive, episodic memory, complex cognition, and social cognition aggregate their loadings within these domains. When Accuracy and Speed were analyzed separately, Accuracy produced 3 reliable factors: executive and complex cognition, episodic memory, and social cognition, while speed produced 2 factors: tests that require fast responses and those where each item requires deliberation. The statistical "Fit" of almost all models described above was acceptable (usually excellent).


CONCLUSIONS
Based on the analysis from these large-scale data, the CNB offers an effective means for measuring the integrity of intended neurocognitive domains in about 1 hour of testing and is thus suitable for large-scale clinical and genomic studies.