LLukas22/scidocs huggingface dataset:
Phosphorylated α-synuclein in Parkinson’s disease: correlation depends on disease severity

INTRODUCTION
α-Synuclein (α-syn) is a key protein in Parkinson's disease (PD), and one of its phosphorylated forms, pS129, is higher in PD patients than healthy controls. However, few studies have examined its levels in longitudinally collected cerebrospinal fluid (CSF) or in preclinical cases. In this study, CSF and clinical data were contributed by >300 subjects from three cohorts (the longitudinal DATATOP cohort, a large cross-sectional cohort, and a cohort of LRRK2 mutation carriers).


RESULTS
Consistent with our previous observation that CSF pS129 positively correlated with Unified Parkinson's Disease Rating Scale (UPDRS) scores, CSF pS129 in the DATATOP cohort increased over approximately two years of disease progression (mean change 5.60 pg/ml, p = 0.050). Intriguingly, in the DATATOP cohort, pS129 negatively correlated with UPDRS scores at the baseline (R = -0.244, p = 0.017), but not final point, suggesting that this association may depend on disease stage. Reanalysis of our previous cohort with stratification by PD stage, and addition of a cohort of LRRK2 mutation carriers with very early/preclinical PD, supported the idea that the relationship between CSF pS129 and disease severity over a wider range of PD stages might be represented with a U-shaped curve, in which lower pS129 levels correlated with worse clinical condition at early stages, but better condition at later stages.


CONCLUSION
The observation of a negative-to-positive transition of correlation of pS129 to disease severity as PD progresses could have profound impact on how pS129 is used as a biomarker clinically as well as in modeling PD experimentally.
Antibacterial activity of black pepper ( Piper nigrum Linn.) with special reference to its mode of action on bacteria

During present study the antibacterial activity of black pepper (Piper nigrum Linn.) and its mode of action on bacteria were done. The extracts of black pepper were evaluated for antibacterial activity by disc diffusion method. The minimum inhibitory concentration (MIC) was determined by tube dilution method and mode of action was studied on membrane leakage of UV260 and UV280 absorbing material spectrophotometrically. The diameter of the zone of inhibition against various Gram positive and Gram negative bacteria was measured. The MIC was found to be 50-500ppm. Black pepper altered the membrane permeability resulting the leakage of the UV260 and UV280 absorbing material i.e., nucleic acids and proteins into the extra cellular medium. The results indicate excellent inhibition on the growth of Gram positive bacteria like Staphylococcus aureus, followed by Bacillus cereus and Streptococcus faecalis. Among the Gram negative bacteria Pseudomonas aeruginosa was more susceptible followed by Salmonella typhi and Escherichia coli.
Dynamic soft tissue mobilisation increases hamstring flexibility in healthy male subjects.

OBJECTIVES
The purpose of this study was to investigate the effect of dynamic soft tissue mobilisation (STM) on hamstring flexibility in healthy male subjects.


METHODS
Forty five males volunteered to participate in a randomised, controlled single blind design study. Volunteers were randomised to either control, classic STM, or dynamic STM intervention. The control group was positioned prone for 5 min. The classic STM group received standard STM techniques performed in a neutral prone position for 5 min. The dynamic STM group received all elements of classic STM followed by distal to proximal longitudinal strokes performed during passive, active, and eccentric loading of the hamstring. Only specific areas of tissue tightness were treated during the dynamic phase. Hamstring flexibility was quantified as hip flexion angle (HFA) which was the difference between the total range of straight leg raise and the range of pelvic rotation. Pre- and post-testing was conducted for the subjects in each group. A one-way ANCOVA followed by pairwise post-hoc comparisons was used to determine whether change in HFA differed between groups. The alpha level was set at 0.05.


RESULTS
Increase in hamstring flexibility was significantly greater in the dynamic STM group than either the control or classic STM groups with mean (standard deviation) increase in degrees in the HFA measures of 4.7 (4.8), -0.04 (4.8), and 1.3 (3.8), respectively.


CONCLUSIONS
Dynamic soft tissue mobilisation (STM) significantly increased hamstring flexibility in healthy male subjects.
Label-aligned multi-task feature learning for multimodal classification of Alzheimer’s disease and mild cognitive impairment

Multimodal classification methods using different modalities of imaging and non-imaging data have recently shown great advantages over traditional single-modality-based ones for diagnosis and prognosis of Alzheimer’s disease (AD), as well as its prodromal stage, i.e., mild cognitive impairment (MCI). However, to the best of our knowledge, most existing methods focus on mining the relationship across multiple modalities of the same subjects, while ignoring the potentially useful relationship across different subjects. Accordingly, in this paper, we propose a novel learning method for multimodal classification of AD/MCI, by fully exploring the relationships across both modalities and subjects. Specifically, our proposed method includes two subsequent components, i.e., label-aligned multi-task feature selection and multimodal classification. In the first step, the feature selection learning from multiple modalities are treated as different learning tasks and a group sparsity regularizer is imposed to jointly select a subset of relevant features. Furthermore, to utilize the discriminative information among labeled subjects, a new label-aligned regularization term is added into the objective function of standard multi-task feature selection, where label-alignment means that all multi-modality subjects with the same class labels should be closer in the new feature-reduced space. In the second step, a multi-kernel support vector machine (SVM) is adopted to fuse the selected features from multi-modality data for final classification. To validate our method, we perform experiments on the Alzheimer’s Disease Neuroimaging Initiative (ADNI) database using baseline MRI and FDG-PET imaging data. The experimental results demonstrate that our proposed method achieves better classification performance compared with several state-of-the-art methods for multimodal classification of AD/MCI.
Effects of sex hormonal levels and phases of the menstrual cycle in the processing of emotional faces

Several neuropsychiatry disorders have shown a sexual dimorphism in their incidence, symptom profile and therapeutic response. A better understanding of the impact of sex hormones in emotional processing sexual dimorphism could bring light to this important clinical finding. Some studies have provided evidence of sex differences in the identification of emotional faces, however, results are inconsistent and such inconsistency could be related to the lack of experimental control of the sex hormone status of participants. More recently, a few studies evaluated the modulation of facial emotion recognition by the phase of the menstrual cycle and sex hormones, however, none of them directly compared these results with a group of men. We evaluated the accuracy of facial emotion recognition in 40 healthy volunteers. Eleven women were assigned to early follicular group, nine women to the ovulatory group and 10 women to luteal group, depending on the phase of menstrual cycle, and a group of 10 men were also evaluated. Estrogen, progesterone and testosterone levels were assessed. The performance of the groups in the identification of emotional faces varied depending on the emotion. Early follicular group were more accurate to perceive angry faces than all other groups. Sadness was more accurately recognized by early follicular group than by luteal group and regarding the recognition of fearful faces a trend to a better performance and a significantly higher accuracy was observed, respectively, in the early follicular group and in the ovulatory group, in comparison to men. In women, estrogen negatively correlated to the accuracy in perception of angry male faces. Our results indicate sex hormones to be implicated in a sexual dimorphism in facial emotion recognition, and highlight the importance of estrogen specifically in the recognition of negative emotions such as sadness, anger and fear.
Endoscopic gastroplication for the treatment of gastro-oesophageal reflux disease: a randomised, sham-controlled trial.

BACKGROUND
Endoscopic treatment for gastro-oesophageal reflux disease (GORD) is rapidly emerging, but there is a great need for randomised controlled trials to evaluate the efficacy.


DESIGN AND SETTING
A single-centre, double-blind, randomised, sham-controlled trial of endoscopic gastroplication by the Endocinch suturing system.


PATIENTS AND INTERVENTIONS
60 patients with GORD were randomly assigned to three endoscopic gastroplications (n = 20), a sham procedure (n = 20) or observation (n = 20). The research nurse and patients in the active and sham groups were blinded to the procedure assignment. After 3 months, open-label active treatment was offered to all patients.


OUTCOME MEASURES
The primary outcome measures were proton pump inhibitor (PPI) use and GORD symptoms, and secondary measures were quality of life, 24-h oesophageal acid exposure, oesophageal manometry and adverse events. Follow-up assessments were performed at 3, 6 and 12 months.


RESULTS
At 3 months, the percentage of patients who had reduced drug use by > or =50% was greater in the active treatment group (65%) than in the sham (25%) or observation groups (0%) (p<0.02). Symptoms (heartburn and to a lesser extent regurgitation) improved more in the active group than in the sham group. Three Short Form-20 quality of life subscales (role function, general health and bodily pain perception) improved in the active group versus sham. Oesophageal acid exposure was modestly decreased after active treatment (p<0.02), but not significantly greater than after the sham procedure (p = 0.61). The active treatment effects on PPI use, symptoms and quality of life persisted after 6 and 12 months of open-label follow-up (n = 41), but 29% of patients were retreated in this period. No serious adverse events occurred.


CONCLUSIONS
Endoscopic gastroplication, using the Endocinch device, reduced acid-inhibitory drug use, improved GORD symptoms and improved the quality of life at 3 months compared with a sham procedure. The effects persisted up to 12 months. However, the reduction in oesophageal acid exposure was not greater after endoscopic treatment than after a sham procedure.
Personality traits and eating habits in a large sample of Estonians.

OBJECTIVES
Diet has health consequences, which makes knowing the psychological correlates of dietary habits important. Associations between dietary habits and personality traits were examined in a large sample of Estonians (N = 1,691) aged between 18 and 89 years.


METHOD
Dietary habits were measured using 11 items, which grouped into two factors reflecting (a) health aware and (b) traditional dietary patterns. The health aware diet factor was defined by eating more cereal and dairy products, fish, vegetables and fruits. The traditional diet factor was defined by eating more potatoes, meat and meat products, and bread. Personality was assessed by participants themselves and by people who knew them well. The questionnaire used was the NEO Personality Inventory-3, which measures the Five-Factor Model personality broad traits of Neuroticism, Extraversion, Openness, Agreeableness, and Conscientiousness, along with six facets for each trait. Gender, age and educational level were controlled for.


RESULTS
Higher scores on the health aware diet factor were associated with lower Neuroticism, and higher Extraversion, Openness and Conscientiousness (effect sizes were modest: r = .11 to 0.17 in self-ratings, and r = .08 to 0.11 in informant-ratings, ps < 0.01 or lower). Higher scores on the traditional diet factor were related to lower levels of Openness (r = -0.14 and -0.13, p < .001, self- and informant-ratings, respectively).


CONCLUSIONS
Endorsement of healthy and avoidance of traditional dietary items are associated with people's personality trait levels, especially higher Openness. The results may inform dietary interventions with respect to possible barriers to diet change.
Wireless resources virtualization in LTE systems

This paper proposes a framework for Wireless Resource Virtualization (WRV) in Long Term Evolution (LTE) systems. An shared radio access network connects Multiple Mobile Network Operators (MNOs) and allocates radio resources to their users. We formulate the WRV problem as a Binary Integer Programming (BIP) problem. Subsequently, a low complexity iterative algorithm is presented to solve the BIP problem. The proposed framework allows MNOs to customize their scheduling policies to fit their service requirements and business models. Essential considerations like isolation across MNOs, complexity, and efficient resource utilization are also considered and evaluated. The results show that the proposed framework can efficiently share the radio resources between MNOs while maintaining the sharing agreement conditions.
Social Media : A TOOL FOR OPEN INNOVATION

Despite the exponential rise of social media use in external stakeholder engagement, academic research and managerial practice have paid little attention to how it can be used for open innovation across the entire innovation funnel, spanning ideation, R&D, and commercialization. As a result, there is little understanding of how companies can organize for and implement social media for open innovation. Utilizing a multiple case study design, this article examines its application across the entire innovation process. It proposes a range of organizational and technological adaptations that managers can implement to ensure they realize the innovative benefits of social media application. (
Convergent Evolution at the Gametophytic Self-Incompatibility System in Malus and Prunus

S-RNase-based gametophytic self-incompatibility (GSI) has evolved once before the split of the Asteridae and Rosidae. This conclusion is based on the phylogenetic history of the S-RNase that determines pistil specificity. In Rosaceae, molecular characterizations of Prunus species, and species from the tribe Pyreae (i.e., Malus, Pyrus, Sorbus) revealed different numbers of genes determining S-pollen specificity. In Prunus only one pistil and pollen gene determine GSI, while in Pyreae there is one pistil but multiple pollen genes, implying different specificity recognition mechanisms. It is thus conceivable that within Rosaceae the genes involved in GSI in the two lineages are not orthologous but possibly paralogous. To address this hypothesis we characterised the S-RNase lineage and S-pollen lineage genes present in the genomes of five Rosaceae species from three genera: M. × domestica (apple, self-incompatible (SI); tribe Pyreae), P. persica (peach, self-compatible (SC); Amygdaleae), P. mume (mei, SI; Amygdaleae), Fragaria vesca (strawberry, SC; Potentilleae), and F. nipponica (mori-ichigo, SI; Potentilleae). Phylogenetic analyses revealed that the Malus and Prunus S-RNase and S-pollen genes belong to distinct gene lineages, and that only Prunus S-RNase and SFB-lineage genes are present in Fragaria. Thus, S-RNase based GSI system of Malus evolved independently from the ancestral system of Rosaceae. Using expression patterns based on RNA-seq data, the ancestral S-RNase lineage gene is inferred to be expressed in pistils only, while the ancestral S-pollen lineage gene is inferred to be expressed in tissues other than pollen.
Investigation of the harmonic behavior of three phase transformer under nonsinusoidal operation using finite element and wavelet packets

This paper investigates the harmonic behavior of three phase power transformers under nonsinusoidal operations. The terminal behavior of the transformer was obtained by coupling the transformer transient finite-element (FE) model and external electric circuits. Such a technique would allow the physical representation of the nonlinear magnetization behavior of the transformer as well as the strong frequency dependence of the transformer parameters. The harmonic behavior of the transformer currents and the dc load current were analyzed using wavelet packet transform algorithm (WPT). The key findings are, uniform frequency bands resulting from WPT decomposition process of the current waveforms can be used for identification of harmonic components. The flattened input voltage distorted by 3rd harmonic component has the highest impact on the dc load current harmonics (with respect to the sinusoidal case). The peaking input voltage distorted by the 5th harmonic component has the highest impact on the transformer secondary current and the magnetizing current harmonics
Beat: a tool for visualizing the execution of object orientated concurrent programs

The transition from single core to multicore processors has lead to a greater need for programmers to become familiar with concurrent programming. In particular there is a need to help programmers new to concurrent programming to understand how to utilize multiprocessor systems. We feel that visualization tools could be extremely helpful to these programmers. In this paper we present a novel design for a program trace visualizer we call Beat.
Intraoperative guidance in parathyroid surgery using near-infrared fluorescence imaging and low-dose Methylene Blue.

BACKGROUND
Identification of diseased and normal parathyroid glands during parathyroid surgery can be challenging. The aim of this study was to assess whether near-infrared (NIR) fluorescence imaging using administration of a low-dose Methylene Blue (MB) at the start of the operation could provide optical guidance during parathyroid surgery and assist in the detection of parathyroid adenomas.


METHODS
Patients diagnosed with primary hyperparathyroidism planned for parathyroidectomy were included. Patients received 0.5 mg/kg MB intravenously directly after start of anesthesia. During the operation, NIR fluorescence imaging was performed to identify parathyroid adenomas. Imaging results were compared with a previous published feasibility study in which 12 patients received MB after intraoperative identification of the adenoma.


RESULTS
A total of 13 patients were included in the current study. In 10 of 12 patients with a histologically proven adenoma, the adenoma was fluorescent. Mean signal to background ratio was 3.1 ± 2.8. Mean diameter of the resected lesions was 17 ± 9 mm (range 5-28 mm). Adenomas could be identified up to 145 minutes after administration, which was the longest timespan until resection. Interestingly, in 3 patients, a total of 6 normal parathyroid glands (median diameter 2.5 mm) with a signal to background ratio of 1.8 ± 0.4 were identified using NIR fluorescence imaging.


CONCLUSION
Early administration of low-dose MB provided guidance during parathyroidectomy by identifying both parathyroid adenomas and normal parathyroid glands. In patients in whom difficult identification of the parathyroid adenoma is expected or when normal glands have to be identified, the administration of MB may improve surgical outcome.
Outcome of late-life depression after 3 years of sequential treatment.

OBJECTIVE
To study the outcome of a sequential treatment protocol in elderly, severely depressed in-patients.


METHOD
All 81 patients from a 12-week double-blind randomized controlled trial (RCT) comparing venlafaxine with nortriptyline were asked to participate in a 3 year follow-up study. Thirty-two patients who did not achieve remission during the RCT, entered an open sequential treatment protocol and were treated with augmentation with lithium, switch to a monoamine oxidase inhibitor or ECT.


RESULTS
Seventy-eight of the 81 patients (96.3%) achieved a response [> or = 50% reduction in Montgomery Asberg Depression Rating Scale score) and 68 patients (84%) a complete remission (final MADRS score < or = 10) within 3 years of treatment. Greater severity and longer duration of the depressive episode at baseline predicted poor recovery. Augmentation with lithium may be the best treatment option in treatment resistant depressed elderly. Only few patients dropped-out due to side-effects.


CONCLUSION
Our study demonstrates the importance of persisting with antidepressant treatment in elderly patients who do not respond to the first or second treatment.
An Adaptive Moments Estimation Technique Applied to MST Radar Echoes

An adaptive spectral moments estimation technique has been developed for analyzing the Doppler spectra of the mesosphere–stratosphere–troposphere (MST) radar signals. The technique, implemented with the MST radar at Gadanki (13.5°N, 79°E), is based on certain criteria, set up for the Doppler window, signal-to-noise ratio (SNR), and wind shear parameters, which are used to adaptively track the signal in the range–Doppler spectral frame. Two cases of radar data, one for low and the other for high SNR conditions, have been analyzed and the results are compared with those from the conventional method based on the strongest peak detection in each range gate. The results clearly demonstrate that by using the adaptive method the height coverage can be considerably enhanced compared to the conventional method. For the low SNR case, the height coverage for the adaptive and conventional methods is about 22 and 11 km, respectively; the corresponding heights for the high SNR case are 24 and 13 km. To validate the results obtained through the adaptive method, the velocity profile is compared with global positioning system balloon sounding (GPS sonde) observations. The results of the adaptive method show excellent agreement with the GPS sonde measured wind speeds and directions throughout the height profile. To check the robustness and reliability of the adaptive algorithm, data taken over a diurnal cycle at 1-h intervals were analyzed. The results demonstrate the reliability of the algorithm in extracting wind profiles that are self-consistent in time. The adaptive method is thus found to be of considerable advantage over the conventional method in extracting information from the MST radar signal spectrum, particularly under low SNR conditions that are free from interference and ground clutter.