LLukas22/scidocs huggingface dataset:
Deep Learning Techniques for Music Generation - A Survey

This paper is a survey and an analysis of different ways of using deep learning to generate musical content. We propose a methodology based on five dimensions: Objective - What musical content is to be generated? Examples are: melody, polyphony, accompaniment or counterpoint. - For what destination and for what use? To be performed by a human(s) (in the case of a musical score), or by a machine (in the case of an audio file). Representation - What are the concepts to be manipulated? Examples are: waveform, spectrogram, note, chord, meter and beat. - What format is to be used? Examples are: MIDI, piano roll or text. - How will the representation be encoded? Examples are: scalar, one-hot or many-hot. Architecture - What type(s) of deep neural network is (are) to be used? Examples are: feedforward network, recurrent network, autoencoder or generative adversarial networks. Challenges - What are the limitations and open challenges? Examples are: variability, interactivity and creativity. Strategy - How do we model and control the process of generation? Examples are: single-step feedforward, iterative feedforward, sampling or input manipulation. For each dimension, we conduct a comparative analysis of various models and techniques and propose some tentative multidimensional typology which is bottom-up, based on the analysis of many existing deep-learning based systems for music generation selected from the relevant literature. These systems are described and used to exemplify the various choices of objective, representation, architecture, challenges and strategies. The last part of the paper includes some discussion and some prospects. This is a simplified version (weak DRM) of the book: Briot, J.-P., Hadjeres, G. and Pachet, F.-D. (2019) Deep Learning Techniques for Music Generation, Computational Synthesis and Creative Systems, Springer.
Hepatobiliary agents and their role in LI-RADS

The Liver Imaging Reporting and Data System (LI-RADS) was introduced with the goal of standardizing the diagnosis of hepatocellular carcinoma. The 2014 version of LI-RADS incorporates the use of hepatobiliary contrast agents (HBAs) into the diagnostic algorithm, including gadoxetate disodium and gadobenate dimeglumine. Three new ancillary features are introduced: hepatobiliary phase (HBP) hypointensity and HBP hypointense rim favor malignancy, while HBP isointensity favors benignity. HBP hyperintensity favors neither malignancy nor benignity. In this review, we describe how to use these new features as well as numerous pitfalls associated with the use ofHBAs, including hemangiomas, cholangiocarcinomas, and focal confluent fibrosis. Importantly, findings on the HBP are not included as major criteria and therefore the criteria for the diagnosis of LI-RADS 5 observations remain unchanged, and so congruence with the Organ Procurement Transplant Network system remains intact. Additionally, we review how the major features in LI-RADS, arterial phase hyperenhancement, threshold growth, and washout and capsule appearance, may be affected with HBAs. Notably with HBAs, hypointensity on the delayed phase, termed the transitional phase, does not qualify as washout appearance due to the possibility of early parenchymal enhancement. It is hoped that the incorporation of HBAs into LI-RADS will help create consistency when interpreting HBA enhanced MRIs.
Calibrating EEG-based motor imagery brain-computer interface from passive movement

EEG data from performing motor imagery are usually collected to calibrate a subject-specific model for classifying the EEG data during the evaluation phase of motor imagery Brain-Computer Interface (BCI). However, there is no direct objective measure to determine if a subject is performing motor imagery correctly for proper calibration. Studies have shown that passive movement, which is directly observable, induces Event-Related Synchronization patterns that are similar to those induced from motor imagery. Hence, this paper investigates the feasibility of calibrating EEG-based motor imagery BCI from passive movement. EEG data of 12 healthy subjects were collected during motor imagery and passive movement of the hand by a haptic knob robot. The calibration models using the Filter Bank Common Spatial Pattern algorithm on the EEG data from motor imagery were compared against using the EEG data from passive movement. The performances were compared based on the 10×10-fold cross-validation accuracies of the calibration data, and off-line session-to-session transfer kappa values to other sessions of motor imagery performed on another day. The results showed that the calibration performed using passive movement yielded higher model accuracy and off-line session-to-session transfer (73.6% and 0.354) than the calibration performed using motor imagery (71.3% and 0.311), and no significant differences were observed between the two groups (p=0.20, 0.23). Hence, this study shows that it is feasible to calibrate EEG-based motor imagery BCI from passive movement.
Urban Earthquake Fatalities: A Safer World, or Worse to Come?

The global fatality count from earthquakes continues to rise. This has occurred despite the adoption of earthquake resistant building codes in most countries where damaging earthquakes have historically caused loss of life. In the past five centuries the global deathtoll from earthquakes has averaged 100,000/year, a rate that is dominated by large infrequent disasters, mostly in the developing nations. Though an increased fatality rate might be expected from the steady increase in global population (Bilham, 1988), recent urban growth has been accompanied by a decline in the fatality rate as expressed as a percentage of instantaneous population. It is tempting to attribute this observation to the application of earthquake resistant construction code in new city construction. A more sinister interpretation, however, is that the apparent decline in risk is caused by the short exposure time (50 years) of the world's recently increased population to earthquakes with recurrence intervals of the order of centuries. Future extreme earthquake disasters in some of the world's megacities may arrest, or reverse, the current trend.
Predictive validity of a five-item symptom checklist to screen psychiatric morbidity and suicide ideation in general population and psychiatric settings.

BACKGROUND/PURPOSE
Suicide is a major concern in public health worldwide. Early identification of individuals at risk is critical for suicide prevention. The present study revised the 5-item Brief Symptom Rating Scale (BSRS-5) to a checklist format (BSRS-5R) and validated the BSRS-5R into a screening tool for psychiatric morbidity and suicide ideation in the general public.


METHODS
The study participants consisted of two subsets of sample from community residents and psychiatric patients. The community subjects were recruited from stratified proportional randomization sampling in a nationwide community survey, while the psychiatric patients were from psychiatric outpatient service and psychiatric daycare unit in a teaching hospital in northern Taiwan. All participants responded to the questionnaire investigating the BSRS-5, personal experience with suicide, and demographic information.


RESULTS
In total, 2147 community respondents and 700 respondents from psychiatric settings completed the survey questions. The BSRS-5R was highly correlated to BSRS-5 with good internal consistency in our study sample. For the community subjects, receiver operating characteristic curve analysis revealed an optimal cutoff of 2/3 for BSRS-5R to discriminate psychiatric morbidity or suicide ideation. The BSRS-5R could also identify psychiatric morbidity in psychiatric outpatients and daycare patients. In addition, the cutoff of 4/5 for BSRS-5R to determine suicide ideation yielded moderately good predictive validity in psychiatric outpatients and in daycare patients.


CONCLUSION
The BSRS-5R was validated as an efficient checklist to screen for psychiatric morbidity and suicide ideation in the general public. The result is valuable in translating into general medical and community settings for early detection of suicide ideation.
Asking the Right Questions in Crowd Data Sourcing

Crowd-based data sourcing is a new and powerful data procurement paradigm that engages Web users to collectively contribute information. In this work, we target the problem of gathering data from the crowd in an economical and principled fashion. We present Ask It!, a system that allows interactive data sourcing applications to effectively determine which questions should be directed to which users for reducing the uncertainty about the collected data. Ask It! uses a set of novel algorithms for minimizing the number of probing (questions) required from the different users. We demonstrate the challenge and our solution in the context of a multiple-choice question game played by the ICDE'12 attendees, targeted to gather information on the conference's publications, authors and colleagues.
SpringFS: bridging agility and performance in elastic distributed storage

▪ Agile resizing → 50% less machine hour usage ▪ State-of-the-art elastic storage designs ▪ Sierra and Rabbit force painful tradeoff between elasticity, performance and agility ▪ Need a new elastic storage design that ▪ Fills the gap in the tradeoff space ▪ Achieves great agility ▪ Maintains performance and elasticity goals ▪ Continuum between “Rabbit” and “Sierra” ▪ Elasticity of Rabbit ▪ Peak write performance of Sierra ▪ Maximized agility along continuum between best cases
Hyaluronan-modified magnetic nanoclusters for detection of CD44-overexpressing breast cancer by MR imaging.

We fabricated hyaluronan-modified magnetic nanoclusters (HA-MNCs) for detection of CD44-overexpressing breast cancer using magnetic resonance (MR) imaging. CD44 is closely associated with cancer growth, including proliferation, metastasis, invasion, and angiogenesis. Hence, pyrenyl hyaluronan (Py-HA) conjugates were synthesized as CD44-targetable surfactants with hyaluronan (HA) and 1-pyrenylbutyric acid (Py) to modify hyaluronan on hydrophobic magnetic nanocrystals. Subsequently, HA-MNCs were fabricated using the nano-emulsion method; magnetic nanocrystals were simultaneously self-assembled with Py-HA conjugates, and their physical and magnetic properties depended on the degree of substitution (DS) of Py in Py-HA conjugates. HA-MNCs exhibited superior targeting efficiency with MR sensitivity as well as excellent biocompatibility through in vitro/in vivo studies. This suggests that HA-MNCs can be a potent cancer specific molecular imaging agent via targeted detection of CD44 with MR imaging.
The Psychological Health Benefits of Accepting Negative Emotions and Thoughts: Laboratory, Diary, and Longitudinal Evidence.

Individuals differ in the degree to which they tend to habitually accept their emotions and thoughts without judging them-a process here referred to as habitual acceptance. Acceptance has been linked with greater psychological health, which we propose may be due to the role acceptance plays in negative emotional responses to stressors: acceptance helps keep individuals from reacting to-and thus exacerbating-their negative mental experiences. Over time, experiencing lower negative emotion should promote psychological health. To test these hypotheses, Study 1 (N = 1,003) verified that habitually accepting mental experiences broadly predicted psychological health (psychological well-being, life satisfaction, and depressive and anxiety symptoms), even when controlling for potentially related constructs (reappraisal, rumination, and other mindfulness facets including observing, describing, acting with awareness, and nonreactivity). Next, in a laboratory study (Study 2, N = 156), habitual acceptance predicted lower negative (but not positive) emotional responses to a standardized stressor. Finally, in a longitudinal design (Study 3, N = 222), acceptance predicted lower negative (but not positive) emotion experienced during daily stressors that, in turn, accounted for the link between acceptance and psychological health 6 months later. This link between acceptance and psychological health was unique to accepting mental experiences and was not observed for accepting situations. Additionally, we ruled out potential confounding effects of gender, ethnicity, socioeconomic status, and life stress severity. Overall, these results suggest that individuals who accept rather than judge their mental experiences may attain better psychological health, in part because acceptance helps them experience less negative emotion in response to stressors. (PsycINFO Database Record
Taxing capital income in a perpetual youth economy

We reconsider the issue of capital income taxation in an OLG perpetual youth framework. We show that the long run zero tax result does not generally hold. Besides the “life-cycle” motive pointed at by recent works, this work unveils two other forces pushing toward the taxation of capital income: the disconnection between generations and the relationship between the government and the individual intertemporal discount rates. We also show as a special case, that the non zero tax result applies also if age dependent taxes are not available, provided that the life-cycle behavior is ruled out, which cannot happen in the standard OLG models. Finally, it emerges that unfair life insurance contracts do not qualitatively affect the results. Journal of Economic Literature Classification Numbers: E62, H21.
Relationships between self-esteem, media influence and drive for thinness.

The media is a powerful societal tool for expressing expectations about how men and women should look. As a result, over the past several years, women have shown an increase in body dissatisfaction (Cash, Morrow, Hrabosky, & Perry, 2004). The present study examined the relationships between drive for thinness, self-esteem, and media influence among men and women. Two hundred ninety-four college students completed the Texas Social Behavior Inventory (Helmreich & Stapp, 1974), Sociocultural Attitudes towards Appearance Scale-3 (Thompson, van den Berg, Roehrig, Guarda, & Hienberg, 2004), self-constructed questionnaire influence of media models, and the drive for Thinness Subscale (DT) from the Eating Disorder Inventory-3 (EDI-3; (Garner, 2004)). We expected to find an association between drive for thinness and media influence and between drive for thinness and self-esteem for both men and women. Finally, we expected that the use of media, social pressures and media internalization would be predictors of drive for thinness. We found a relationship between media influence and drive for thinness. There was also a relationship between self-esteem and drive for thinness. For both men and women, media models were the primary predictor for drive for thinness. However, for women the secondary predictor was social pressures; whereas for men the secondary predictor was internalization. Such findings show the importance of examining the impact of media sources on men and women in order to entangle gender differences.
Biochemical, Histological, and Memory Impairment Effects of Chronic Copper Toxicity: A Model for Non-Wilsonian Brain Copper Toxicosis in Wistar Rat

Animal models of copper toxicosis rarely exhibit neurological impairments and increased brain copper accumulation impeding the development of novel therapeutic approaches to treat neurodegenerative diseases having high brain Cu content. The aim of this study was to investigate the effects of intraperitoneally injected copper lactate (0.15 mg Cu/100 g body weight) daily for 90 days on copper and zinc levels in the liver and hippocampus, on biochemical parameters, and on neurobehavioral functions (by Morris water maze) of male Wistar rats. Copper-administered animals exhibited significantly decreased serum acetylcholinesterase (AChE) activity and impaired neuromuscular coordination and spatial memory compared to control rats. Copper-intoxicated rats showed significant increase in liver and hippocampus copper content (99.1 and 73 % increase, respectively), 40.7 % reduction in hepatic zinc content, and interestingly, 77.1 % increase in hippocampus zinc content with concomitant increase in copper and zinc levels in serum and urine compared to control rats. Massive grade 4 copper depositions and grade 1 copper-associated protein in hepatocytes of copper-intoxicated rats were substantiated by rhodanine and orcein stains, respectively. Copper-intoxicated rats demonstrated swelling and increase in the number of astrocytes and copper deposition in the choroid plexus, with degenerated neurons showing pyknotic nuclei and dense eosinophilic cytoplasm. In conclusion, the present study shows the first evidence in vivo that chronic copper toxicity causes impaired spatial memory and neuromuscular coordination, swelling of astrocytes, decreased serum AChE activity, copper deposition in the choroid plexus, neuronal degeneration, and augmented levels of copper and zinc in the hippocampus of male Wistar rats.
Lessons learned from efforts to improve the quality of care in children with end-stage renal disease in the Netherlands and Belgium.

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Kaposi sarcoma incidence in the Swiss HIV cohort study before and after highly active antiretroviral therapy

Between 1984 and 2006, 12 959 people with HIV/AIDS (PWHA) in the Swiss HIV Cohort Study contributed a total of 73 412 person-years (py) of follow-up, 35 551 of which derived from PWHA treated with highly active antiretroviral therapy (HAART). Five hundred and ninety-seven incident Kaposi sarcoma (KS) cases were identified of whom 52 were among HAART users. Cox regression was used to estimate hazard ratios (HR) and corresponding 95% confidence intervals (CI). Kaposi sarcoma incidence fell abruptly in 1996–1998 to reach a plateau at 1.4 per 1000 py afterwards. Men having sex with men and birth in Africa or the Middle East were associated with KS in both non-users and users of HAART but the risk pattern by CD4 cell count differed. Only very low CD4 cell count (<50 cells μl−1) at enrolment or at HAART initiation were significantly associated with KS among HAART users. The HR for KS declined steeply in the first months after HAART initiation and continued to be low 7–10 years afterwards (HR, 0.06; 95% CI, 0.02–0.17). Thirty-three out of 52 (63.5%) KS cases among HAART users arose among PWHA who had stopped treatment or used HAART for less than 6 months.
Duration and course of post-concussive symptoms.

OBJECTIVES
To examine the incidence, duration, and clinical course of individual post-concussive symptoms in patients presenting to a pediatric emergency department (ED) with a concussion.


METHODS
We conducted secondary analysis of a prospective cohort study of patients 11 to 22 years old presenting to the ED of a children's hospital with an acute concussion. The main outcome measure was duration of symptoms, assessed by the Rivermead Post-Concussion Symptoms Questionnaire (RPSQ). Patients initially completed a questionnaire describing mechanism of injury, associated symptoms, past medical history, and the RPSQ, then were serially administered the RPSQ for 3 months after the concussion or until all symptoms resolved.


RESULTS
Headache, fatigue, dizziness, and taking longer to think were the most common symptoms encountered at presentation, whereas sleep disturbance, frustration, forgetfulness, and fatigue were the symptoms most likely to develop during the follow-up period that had not initially been present. Median duration of symptoms was the longest for irritability (16 days), sleep disturbance (16 days), frustration (14 days), and poor concentration (14 days), whereas nausea, depression, dizziness, and double-vision abated most quickly. One month after injury, nearly a quarter of children still complained of headache, >20% suffered from fatigue, and nearly 20% reported taking longer to think.


CONCLUSIONS
Among patients presenting to a pediatric ED after a concussion, physical symptoms such as headache predominate immediately after the injury, emotional symptoms tend to develop later in the recovery period, and cognitive symptoms may be present throughout.
Does Impulsivity Relate to Perceived Dependence on and Actual Use of the Mobile Phone ?

Several authors have studied the risks arising from the growth in mobile phone use (e.g. large debts incurred by young people, banned or dangerous use of cellular phones). The aim of this study is to analyse whether impulsivity, which has often been related to various forms of addictive behaviours, is associated with massive use of and dependence on the mobile phone. In this study, 108 female undergraduate psychology students were screened using a questionnaire evaluating actual use of and perceived dependence on the mobile phone, and with the French adaptation of the UPPS Impulsive Behavior Scale. This scale identifies four distinct components associated with impulsive behaviour: Urgency, lack of Premeditation, lack of Perseverance, and Sensation Seeking. The results showed that a relationship can be established between the use of and perceived dependence on the cellular phone and two facets of impulsivity: Urgency and lack of Perseverance. Copyright # 2006 John Wiley & Sons, Ltd.
Psychological distress in parents of children with advanced cancer.

IMPORTANCE
Parent psychological distress can impact the well-being of childhood cancer patients and other children in the home. Recognizing and alleviating factors of parent distress may improve overall family survivorship experiences following childhood cancer.


OBJECTIVES
To describe the prevalence and factors of psychological distress (PD) among parents of children with advanced cancer.


DESIGN
Cohort study embedded within a randomized clinical trial (Pediatric Quality of Life and Evaluation of Symptoms Technology [PediQUEST] study).


SETTING
Multicenter study conducted at 3 children's hospitals (Boston Children's Hospital, Children's Hospital of Philadelphia, and Seattle Children's Hospital).


PARTICIPANTS
Parents of children with advanced (progressive, recurrent, or refractory) cancer.


MAIN OUTCOME MEASURE
Parental PD, as measured by the Kessler-6 Psychological Distress Scale.


RESULTS
Eighty-six of 104 parents completed the Survey About Caring for Children With Cancer (83% participation); 81 parents had complete Kessler-6 Psychological Distress Scale data. More than 50% of parents reported high PD and 16% met criteria for serious PD (compared with US prevalence of 2%-3%). Parent perceptions of prognosis, goals of therapy, child symptoms/suffering, and financial hardship were associated with PD. In multivariate analyses, average parent Kessler-6 Psychological Distress Scale scores were higher among parents who believed their child was suffering highly and who reported great economic hardship. Conversely, PD was significantly lower among parents whose prognostic understanding was aligned with concrete goals of care.


CONCLUSIONS AND RELEVANCE
Parenting a child with advanced cancer is strongly associated with high to severe levels of PD. Interventions aimed at aligning prognostic understanding with concrete care goals and easing child suffering and financial hardship may mitigate parental PD.