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cage_prediction/label_mapping.csv ADDED
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+ new_index,original_enformer_index,identifier,description
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+ 0,4678,CNhs10615,"CAGE:adipose tissue, adult, pool1"
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+ 1,4679,CNhs10616,"CAGE:bladder, adult, pool1"
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+ 2,4680,CNhs10617,"CAGE:brain, adult, pool1"
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+ 3,4681,CNhs10618,"CAGE:cervix, adult, pool1"
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+ 4,4682,CNhs10619,"CAGE:colon, adult, pool1"
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+ 5,4683,CNhs10620,"CAGE:esophagus, adult, pool1"
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+ 6,4684,CNhs10621,"CAGE:heart, adult, pool1"
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+ 7,4685,CNhs10622,"CAGE:kidney, adult, pool1"
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+ 8,4686,CNhs10624,"CAGE:liver, adult, pool1"
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+ 9,4687,CNhs10625,"CAGE:lung, adult, pool1"
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+ 10,4688,CNhs10626,"CAGE:ovary, adult, pool1"
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+ 11,4689,CNhs10627,"CAGE:placenta, adult, pool1"
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+ 12,4690,CNhs10628,"CAGE:prostate, adult, pool1"
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+ 13,4691,CNhs10629,"CAGE:skeletal muscle, adult, pool1"
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+ 14,4692,CNhs10630,"CAGE:small intestine, adult, pool1"
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+ 15,4693,CNhs10631,"CAGE:spleen, adult, pool1"
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+ 16,4694,CNhs10632,"CAGE:testis, adult, pool1"
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+ 17,4695,CNhs10633,"CAGE:thymus, adult, pool1"
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+ 18,4696,CNhs10634,"CAGE:thyroid, adult, pool1"
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+ 19,4697,CNhs10635,"CAGE:trachea, adult, pool1"
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+ 20,4698,CNhs10636,"CAGE:retina, adult, pool1"
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+ 21,4699,CNhs10637,"CAGE:temporal lobe, adult, pool1"
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+ 22,4700,CNhs10638,"CAGE:postcentral gyrus, adult, pool1"
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+ 23,4701,CNhs10640,"CAGE:pons, adult, pool1"
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+ 24,4702,CNhs10641,"CAGE:parietal lobe, adult, pool1"
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+ 25,4703,CNhs10642,"CAGE:paracentral gyrus, adult, pool1"
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+ 26,4704,CNhs10643,"CAGE:occipital pole, adult, pool1"
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+ 27,4705,CNhs10644,"CAGE:nucleus accumbens, adult, pool1"
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+ 28,4706,CNhs10645,"CAGE:medulla oblongata, adult, pool1"
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+ 29,4707,CNhs10646,"CAGE:insula, adult, pool1"
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+ 30,4708,CNhs10647,"CAGE:frontal lobe, adult, pool1"
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+ 31,4709,CNhs10648,"CAGE:dura mater, adult,"
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+ 32,4710,CNhs10649,"CAGE:corpus callosum, adult, pool1"
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+ 33,5041,CNhs11882,CAGE:adenocarcinoma cell line:IM95m
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+ 34,5064,CNhs11943,CAGE:breast carcinoma cell line:MCF7
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+ 35,4934,CNhs11741,CAGE:diffuse large B-cell lymphoma cell line:CTB-1
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+ 36,4724,CNhs10731,CAGE:glioma cell line:GI-1
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+ 37,5015,CNhs11851,CAGE:liposarcoma cell line:SW 872
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+ 38,4754,CNhs11951,"CAGE:Sebocyte,"
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+ 39,4759,CNhs11955,"CAGE:CD4+ T Cells,"
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+ 40,4764,CNhs11957,"CAGE:Natural Killer Cells,"
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+ 41,4767,CNhs10862,"CAGE:Neutrophils,"
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+ 42,4870,CNhs11317,"CAGE:Pericytes,"
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+ 43,4877,CNhs12084,"CAGE:Alveolar Epithelial Cells,"
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+ 44,4884,CNhs11333,"CAGE:Renal Mesangial Cells,"
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+ 45,4784,CNhs12019,"CAGE:Nucleus Pulposus Cell,"
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+ 46,4888,CNhs12921,"CAGE:Keratocytes,"
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+ 47,4893,CNhs12922,"CAGE:Mesenchymal Stem Cells - adipose,"
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+ 48,4807,CNhs11077,"CAGE:Mammary Epithelial Cell,"
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+ 49,4808,CNhs11385,"CAGE:Osteoblast,"
cage_prediction/sequences_coordinates.csv ADDED
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